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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3035184..3036969+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002601-T1 ID=KJC3_002601-T1|Name=KJC3_002601-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1786bp|location=Sequence derived from alignment at ch2:3035184..3036969+ (Aspergillus niger KJC3)
GGGAAAGCTTTGTCCAATTGCCCTGGCCAACTGGGACAACAGTCTCCACT
ATCTTTTGCGAGATTTGTCCGTCGGGTAGCCGGAGCACCCAGGAATTGGA
TGGACGAAGGCACCCAATCTCCCTAATATTATGTTATCTGCGCCATGGAT
CCAATATTCCAGCCATGCACGAATCTGCCCAGTCGGCAGCCATACGGGCT
AAGGCGACTCTGAAAGTATAATTCCCCTGGTGCCGAATTCTTGTGGGAAG
TAAGTTAGTTCCACGATAAAATAAATATACTTGAATAGTCGCATCTGTTC
TGTCAAAGGATGACCACCATCGTCGCGGATCTCTGCCCGTCGTGATGGGT
TCCAGCATAACCAACCCTTCCGGACTGGCCCTGGAAAGGGGCATGTGGGC
TGCAGTCGCAATAGCCACCTTTATTCTCATTCTCCGAATCATTGCGAAGA
TCAAAATTCGCAACTTTCGCATTGACGATGTGTTGATGATCATAGCCTGG
GTAGGACGACCTCCTCTTCCCCCGCGCTAACCATGGGCCCTTGTGTCGCA
TCTCTGACCATCTGTGTTTCAGGCACTGACACTCGCATCCACGGTCATCT
TGACACTTTCTGTACAAAATGGCTTCGGCACGAACCTCACCAAACTCCCG
GCCCATAACACCTCGCAGGTGCTGAAATACATCGCCTTCGAAGTACTTCT
TGTGACCCTTAGCACCGGCATAGCCCGCTCCTCATTCGTCCTCTACCTGT
TGGCTATTCTTGGTGGAAAGAAGAAATATTGTGTCGCATTATGGATTGCC
ATGGTGCTGCAGCTCTGCGCCAACATCGTCTCTGCAGTGCTGCCACTCTC
CATCTGCCGCGACGCCCGAATTCTGTGGGATCCGACCGTCAAGACAACAT
GTGGCAATAGCGTCGCGGTGGTTAACTTCTCCTACTTCTCCTCATGTAGG
TCTTTCCCATCCACTGGCTAACTCTCACGGGACTGAGAGCTGACGATGGG
TGCATCTAGCCGTCAATTCTGCTACCGACTTGTTCCTGGCAGTGTTCCCA
ACCATCATTTTCTGGAACCTGAACCTGAAGATGCGGATCAAAATCAGTTT
GATTATTCTGCTCAGTCTTGGTATAGTGTCAGTATATCCCCGCTTTGATT
TTACTTGTTGGCCTGTCAACTTACGTGGAGTAGTGCCATGGTTGCCTCGA
TCATCAAGACTACCAAACTCGACGAAGTCCCCAGCATCACCAACCTCGGT
GCCGGCGGTGCGGTGGAGCTGATTCGCTGGGGATTTTCGGAGAACCTGAT
CATTATTATCACCTCCTCCGTGCCCTGCATCCGACCTTTGCTTATCTCTT
CTGTGAGAAAACTCTCAAGTGCGGCGCGTTCTCGCTCGTACGAACTCAGT
GGTCCGTTTTCGGCTCAGAAGGGAACCGGGAAGAACGGCACCTCCCAGTC
TCATGCGCAGGAGCAGCCTAGTACAGACAATCGCGATGACTGCGACAGTA
TCGAGCAAATCCTCAAGGATAGCTACCACTCGGGGTCGATGGTGGAGTCC
GGGCGCGGCATTAAGAAGCAGGTTGAGATCTCGGTGGTGTCGAACCAAAA
GAGCAGCCGCTGGGGTGGTGACCGGGCGAGCCGCTCATAGCGGACGTGTT
TCTTTTGTTTGTTTCTATACTATTGCCACTACTACTACTACTACTACTAC
TACTACTATCTGTCTCACTTTAGACAGCCAGACGCATGTTCACGAGTTAC
GCCAACTTGTCCTGCTACTTAATGCCATATAATGAG back to topCoding sequence (CDS) from alignment at ch2:3035184..3036969+ >KJC3_002601-T1 ID=KJC3_002601-T1|Name=KJC3_002601-T1|organism=Aspergillus niger KJC3|type=CDS|length=4416bp|location=Sequence derived from alignment at ch2:3035184..3036969+ (Aspergillus niger KJC3)
ATGGGTTCCAGCATAACCAACCCTTCCGGACTGGCCCTGGAAAGGGGCAT
GTGGGCTGCAGTCGCAATAGCCACCTTTATTCTCATTCTCCGAATCATTG
CGAAGATCAAAATTCGCAACTTTCGCATTGACGATGTGTTGATGATCATA
GCCTGGGCACTGACACTCGCATCCACGGTCATCTTGACACTTTCTGTACA
AAATGGCTTCGGCACGAACCTCACCAAACTCCCGGCCCATAACACCTCGC
AGGTGCTGAAATACATCGCCTTCGAAGTACTTCTTGTGACCCTTAGCACC
GGCATAGCCCGCTCCTCATTCGTCCTCTACCTGTTGGCTATTCTTGGTGG
AAAGAAGAAATATTGTGTCGCATTATGGATTGCCATGGTGCTGCAGCTCT
GCGCCAACATCGTCTCTGCAGTGCTGCCACTCTCCATCTGCCGCGACGCC
CGAATTCTGTGGGATCCGACCGTCAAGACAACATGTGGCAATAGCGTCGC
GGTGGTTAACTTCTCCTACTTCTCCTCATCCGTCAATTCTGCTACCGACT
TGTTCCTGGCAGTGTTCCCAACCATCATTTTCTGGAACCTGAACCTGAAG
ATGCGGATCAAAATCAGTTTGATTATTCTGCTCAGTCTTGGTATAGTTGC
CATGGTTGCCTCGATCATCAAGACTACCAAACTCGACGAAGTCCCCAGCA
TCACCAACCTCGGTGCCGGCGGTGCGGTGGAGCTGATTCGCTGGGGATTT
TCGGAGAACCTGATCATTATTATCACCTCCTCCGTGCCCTGCATCCGACC
TTTGCTTATCTCTTCTGTGAGAAAACTCTCAAGTGCGGCGCGTTCTCGCT
CGTACGAACTCAGTGGTCCGTTTTCGGCTCAGAAGGGAACCGGGAAGAAC
GGCACCTCCCAGTCTCATGCGCAGGAGCAGCCTAGTACAGACAATCGCGA
TGACTGCGACAGTATCGAGCAAATCCTCAAGGATAGCTACCACTCGGGGT
CGATGGTGGAGTCCGGGCGCGGCATTAAGAAGCAGGTTGAGATCTCGGTG
GTGTCGAACCAAAAGAGCAGCCGCTGGGGTGGTGACCGGGCGAGCCGCTC
ATAGATGGGTTCCAGCATAACCAACCCTTCCGGACTGGCCCTGGAAAGGG
GCATGTGGGCTGCAGTCGCAATAGCCACCTTTATTCTCATTCTCCGAATC
ATTGCGAAGATCAAAATTCGCAACTTTCGCATTGACGATGTGTTGATGAT
CATAGCCTGGGCACTGACACTCGCATCCACGGTCATCTTGACACTTTCTG
TACAAAATGGCTTCGGCACGAACCTCACCAAACTCCCGGCCCATAACACC
TCGCAGGTGCTGAAATACATCGCCTTCGAAGTACTTCTTGTGACCCTTAG
CACCGGCATAGCCCGCTCCTCATTCGTCCTCTACCTGTTGGCTATTCTTG
GTGGAAAGAAGAAATATTGTGTCGCATTATGGATTGCCATGGTGCTGCAG
CTCTGCGCCAACATCGTCTCTGCAGTGCTGCCACTCTCCATCTGCCGCGA
CGCCCGAATTCTGTGGGATCCGACCGTCAAGACAACATGTGGCAATAGCG
TCGCGGTGGTTAACTTCTCCTACTTCTCCTCATCCGTCAATTCTGCTACC
GACTTGTTCCTGGCAGTGTTCCCAACCATCATTTTCTGGAACCTGAACCT
GAAGATGCGGATCAAAATCAGTTTGATTATTCTGCTCAGTCTTGGTATAG
TTGCCATGGTTGCCTCGATCATCAAGACTACCAAACTCGACGAAGTCCCC
AGCATCACCAACCTCGGTGCCGGCGGTGCGGTGGAGCTGATTCGCTGGGG
ATTTTCGGAGAACCTGATCATTATTATCACCTCCTCCGTGCCCTGCATCC
GACCTTTGCTTATCTCTTCTGTGAGAAAACTCTCAAGTGCGGCGCGTTCT
CGCTCGTACGAACTCAGTGGTCCGTTTTCGGCTCAGAAGGGAACCGGGAA
GAACGGCACCTCCCAGTCTCATGCGCAGGAGCAGCCTAGTACAGACAATC
GCGATGACTGCGACAGTATCGAGCAAATCCTCAAGGATAGCTACCACTCG
GGGTCGATGGTGGAGTCCGGGCGCGGCATTAAGAAGCAGGTTGAGATCTC
GGTGGTGTCGAACCAAAAGAGCAGCCGCTGGGGTGGTGACCGGGCGAGCC
GCTCATAGATGGGTTCCAGCATAACCAACCCTTCCGGACTGGCCCTGGAA
AGGGGCATGTGGGCTGCAGTCGCAATAGCCACCTTTATTCTCATTCTCCG
AATCATTGCGAAGATCAAAATTCGCAACTTTCGCATTGACGATGTGTTGA
TGATCATAGCCTGGGCACTGACACTCGCATCCACGGTCATCTTGACACTT
TCTGTACAAAATGGCTTCGGCACGAACCTCACCAAACTCCCGGCCCATAA
CACCTCGCAGGTGCTGAAATACATCGCCTTCGAAGTACTTCTTGTGACCC
TTAGCACCGGCATAGCCCGCTCCTCATTCGTCCTCTACCTGTTGGCTATT
CTTGGTGGAAAGAAGAAATATTGTGTCGCATTATGGATTGCCATGGTGCT
GCAGCTCTGCGCCAACATCGTCTCTGCAGTGCTGCCACTCTCCATCTGCC
GCGACGCCCGAATTCTGTGGGATCCGACCGTCAAGACAACATGTGGCAAT
AGCGTCGCGGTGGTTAACTTCTCCTACTTCTCCTCATCCGTCAATTCTGC
TACCGACTTGTTCCTGGCAGTGTTCCCAACCATCATTTTCTGGAACCTGA
ACCTGAAGATGCGGATCAAAATCAGTTTGATTATTCTGCTCAGTCTTGGT
ATAGTTGCCATGGTTGCCTCGATCATCAAGACTACCAAACTCGACGAAGT
CCCCAGCATCACCAACCTCGGTGCCGGCGGTGCGGTGGAGCTGATTCGCT
GGGGATTTTCGGAGAACCTGATCATTATTATCACCTCCTCCGTGCCCTGC
ATCCGACCTTTGCTTATCTCTTCTGTGAGAAAACTCTCAAGTGCGGCGCG
TTCTCGCTCGTACGAACTCAGTGGTCCGTTTTCGGCTCAGAAGGGAACCG
GGAAGAACGGCACCTCCCAGTCTCATGCGCAGGAGCAGCCTAGTACAGAC
AATCGCGATGACTGCGACAGTATCGAGCAAATCCTCAAGGATAGCTACCA
CTCGGGGTCGATGGTGGAGTCCGGGCGCGGCATTAAGAAGCAGGTTGAGA
TCTCGGTGGTGTCGAACCAAAAGAGCAGCCGCTGGGGTGGTGACCGGGCG
AGCCGCTCATAGATGGGTTCCAGCATAACCAACCCTTCCGGACTGGCCCT
GGAAAGGGGCATGTGGGCTGCAGTCGCAATAGCCACCTTTATTCTCATTC
TCCGAATCATTGCGAAGATCAAAATTCGCAACTTTCGCATTGACGATGTG
TTGATGATCATAGCCTGGGCACTGACACTCGCATCCACGGTCATCTTGAC
ACTTTCTGTACAAAATGGCTTCGGCACGAACCTCACCAAACTCCCGGCCC
ATAACACCTCGCAGGTGCTGAAATACATCGCCTTCGAAGTACTTCTTGTG
ACCCTTAGCACCGGCATAGCCCGCTCCTCATTCGTCCTCTACCTGTTGGC
TATTCTTGGTGGAAAGAAGAAATATTGTGTCGCATTATGGATTGCCATGG
TGCTGCAGCTCTGCGCCAACATCGTCTCTGCAGTGCTGCCACTCTCCATC
TGCCGCGACGCCCGAATTCTGTGGGATCCGACCGTCAAGACAACATGTGG
CAATAGCGTCGCGGTGGTTAACTTCTCCTACTTCTCCTCATCCGTCAATT
CTGCTACCGACTTGTTCCTGGCAGTGTTCCCAACCATCATTTTCTGGAAC
CTGAACCTGAAGATGCGGATCAAAATCAGTTTGATTATTCTGCTCAGTCT
TGGTATAGTTGCCATGGTTGCCTCGATCATCAAGACTACCAAACTCGACG
AAGTCCCCAGCATCACCAACCTCGGTGCCGGCGGTGCGGTGGAGCTGATT
CGCTGGGGATTTTCGGAGAACCTGATCATTATTATCACCTCCTCCGTGCC
CTGCATCCGACCTTTGCTTATCTCTTCTGTGAGAAAACTCTCAAGTGCGG
CGCGTTCTCGCTCGTACGAACTCAGTGGTCCGTTTTCGGCTCAGAAGGGA
ACCGGGAAGAACGGCACCTCCCAGTCTCATGCGCAGGAGCAGCCTAGTAC
AGACAATCGCGATGACTGCGACAGTATCGAGCAAATCCTCAAGGATAGCT
ACCACTCGGGGTCGATGGTGGAGTCCGGGCGCGGCATTAAGAAGCAGGTT
GAGATCTCGGTGGTGTCGAACCAAAAGAGCAGCCGCTGGGGTGGTGACCG
GGCGAGCCGCTCATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002601-T1.utr5p1 | KJC3_002601-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002601-T1.utr3p1 | KJC3_002601-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.15 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3035184..3036969 + |
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