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KJC3_002602-T1, KJC3_002602-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002602-T1
Unique NameKJC3_002602-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3038684..3041495+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002602-T1 ID=KJC3_002602-T1|Name=KJC3_002602-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2812bp|location=Sequence derived from alignment at ch2:3038684..3041495+ (Aspergillus niger KJC3)
CAGACAGCCCTCCAGTCCAGCCGCATTCTGGAGACCTTGGATACTACCAC
TTCCAATGTTGCTGGACAGGACAGAATGCAACCGATGAGGGACCACTAGC
GGCCTCGCTACGAATCGTAGGAAACGATTGCGGCCAGCCAGTGAGTCGAA
GTAACCTTAAGTCCCCTTAGTTGGATGGAGTGCATGCTGACTGGCTTGAT
CCCTCATCGCTCAGTCCACCAATGGTTGCATCTTCTCGCTCCCCGTCCAC
TGTCGATCACCACGACATTTTGCGGGGTACCGATCCCTAGCCCTTCACCA
TGTGCGGCATGTCGAGATCTCAATGTACCCCAGCTGTCTCATCTAGATGT
CGGAGACTCTGGCGGAAAGGAGGGCCAAAGAATTAGCGATGCAAAAAGCA
AATATAGATCTACCCCAGAACCTAGCTTCACCGATATTCAAACTCAGTCT
CTATTATCCGATTTGGAGGGCCCGAGCCGTGTCGTCACAGATGGCTAGCA
CGTCATCCGCACCAGCTGTTGCCCATCCGGAACCAACCATCGTCGCAGAG
TCGCAGACATCACAGCCTGACGTCCGGACTTGGCCGCCCTCCCCTCCGCT
AGTGCTCCAGTCGAGCGCCCCCGGGCGGGGGTTTATTGCCTGATGACCTC
TTTCATCGATATGTCAAAATAAGAAGATCTTCGCACGGACGCCGCATACC
TGCCATCTGATTGCACAAAAGCAAGGGGCCTACCTGCAGGCGCCACAGCT
GACGGGATAGTCCATTACTTGTTATATCCCGCCGAAGCTTATAGTTGCCG
TGTAGCACGCGCAAGCGTGAATCACGCAACAACGGGGGTCTGCCAGCTGA
GCCACCTAGACTTTGTTCTGATCGTCTTAAATATCAGTGCTGGCACTGAC
AGGTCATTTGGCTCTCTGTCCCCCTTATCTCCCAATTTGGCTCTCACTGC
TCCCAACCCGCACCGAAATCGGTCGCTTTGAGGATCAGTCTTTCACAATG
GGTCGGAAATTGGGCCTCTTCCGTGCTATCTATCTGGTGTCTGCCAGCTG
CATGGGCTCTTTTGCCTTTGCATTTGACACCGGTGTTATCAGTATGCTAC
GCTCTCTTTGTTGTTCGTAATATGTAACAACGAGCTAACCAGAAATTGGC
CAGGCGGTGTTCTTACTCTGTCTTCTTTCCAGAATGACTTCGGATACACA
GTGGCTCAGAAAACCTCCGTCAACTCCAATGCCGTGTCCATCCTCCAGGC
AGGTGCCTTTTTCGGCTGCTTTTTCACGACACCCATCGCATCCTACCTAG
GCCGCCGGCTCGGCCTCATCATCAGTTCCCTTGTATTTACCGTCGGTACC
ATCCTACAGGTCGTTAATTCGCATACTCTGGGGACGTTCTATGCTGGTCG
AGTGATAGCTGGTCTTGGTATCGGCGCCGCCACGGTGCTTATTCCCGTGT
ATGCGGCTGAAATGTCTCCCAAGGACCTACGTGGCCGACTCGGTTCCTGC
TTCCAGTTGTTCTTTGCCTTGGGAGTTATGGTCGCCTACTGGGTCACGTA
TGCTGTGTCGATAGACCAGCCGTCCGCAACAAAACAATGGCAAATTGCGT
TGGGCTTGCAGCTTCTCCCTTCGTCTCTTCTTCTGTTCGGTATGTGCACG
GTTAAGGAGAGCGCTCGGTGGCTCGCCTCCAAGGGCAAGATCGAGAAGGC
TAGAGAGTCCCTGAAATGGGTCAGAGGCGGAGAAGAGACTGAGGAGCTCC
AGCAAGAATTCGATGAGATTTTGGCAGGTATTGAAGAAGAAGCTCGAGTC
AAACAAGGATTCACCTTCCGGGAACTGCTGCTTCCCGCGAATCGCTACCG
GCTGTTCATCGCCTTTACGATTCAGCTAGCGGCGCAACTTACCGGAAATA
CGTCCCTGGCGTATTACGCCACTCAAATCTTTACCGCCGTTGGTGCAGGA
AACTCAAGTAAGCTGGTGACAGGCTTTTTCGGTGTGGTCAAAGTGGTCGG
TGTCTCTATCTTCCAGATTTTCGTTATGGATCGCATCGGTCGGCGATGGC
CGTTCATGATTGGCGCCGCCGCAATGGGATCGTTCATGCTCATCATTGCC
TGCATTTTGGCCACGCATCCGACCAGCTCCAGCGACACCGGAAGCGCCTC
GCCAGCTGGAATCGCCATGATTATCATGACATACTGTGAAGCATTCAGTT
ACAACATGTCCTGGGGCCCTCTTCCCTGGCTGTACGTGGGAGAGATTTTT
TCGAGCCGCACTCGTGAAATTGGCGTGACCGTTGGCGCAGCGTCACAATG
GCTTTTCAATTTCATGATGTCGCAGGTCACGCCGCATGCAATTGACAACA
TCGGATGGAGGATGTTTCTAATGTTTGCGATTTTCAACTACGCGATAGTT
GTATATTCTTATGTATTTCTTAAGGAGGTGCGTCCTACGCCCCAAACTGC
ATTATTAAGGAATTTGCTAACAAGGAGCAGACCTCCAAATACTCTCTCGA
GGAAATGCAAGGCGTCTTTGGTGGCAGCGACCCTGCCAAGGATGATAAAC
TTACGACTACTGAAACGGCAGATAAGACACATACCAGCGAGGTTGAGGAC
AATCAAGGGACCAGCAGTGCAACGCCAAAAGAAGGATAATCGATATATTA
CTTAATTAATCATGATAATGTGTGCATAATAGAGACGAAGTGATGGGGCA
ATAGCATTGCACAGCCTACGATAATGGCGAGGGTCGTCTATACACAGTGA
CATGACGTGGCATCATGATATATCATTTAACAGACTTCAATATCTCCACA
ACACAACACCAA
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Coding sequence (CDS) from alignment at ch2:3038684..3041495+

>KJC3_002602-T1 ID=KJC3_002602-T1|Name=KJC3_002602-T1|organism=Aspergillus niger KJC3|type=CDS|length=4581bp|location=Sequence derived from alignment at ch2:3038684..3041495+ (Aspergillus niger KJC3)
ATGGGTCGGAAATTGGGCCTCTTCCGTGCTATCTATCTGGTGTCTGCCAG
CTGCATGGGCTCTTTTGCCTTTGCATTTGACACCGGTGTTATCAGCGGTG
TTCTTACTCTGTCTTCTTTCCAGAATGACTTCGGATACACAGTGGCTCAG
AAAACCTCCGTCAACTCCAATGCCGTGTCCATCCTCCAGGCAGGTGCCTT
TTTCGGCTGCTTTTTCACGACACCCATCGCATCCTACCTAGGCCGCCGGC
TCGGCCTCATCATCAGTTCCCTTGTATTTACCGTCGGTACCATCCTACAG
GTCGTTAATTCGCATACTCTGGGGACGTTCTATGCTGGTCGAGTGATAGC
TGGTCTTGGTATCGGCGCCGCCACGGTGCTTATTCCCGTGTATGCGGCTG
AAATGTCTCCCAAGGACCTACGTGGCCGACTCGGTTCCTGCTTCCAGTTG
TTCTTTGCCTTGGGAGTTATGGTCGCCTACTGGGTCACGTATGCTGTGTC
GATAGACCAGCCGTCCGCAACAAAACAATGGCAAATTGCGTTGGGCTTGC
AGCTTCTCCCTTCGTCTCTTCTTCTGTTCGGTATGTGCACGGTTAAGGAG
AGCGCTCGGTGGCTCGCCTCCAAGGGCAAGATCGAGAAGGCTAGAGAGTC
CCTGAAATGGGTCAGAGGCGGAGAAGAGACTGAGGAGCTCCAGCAAGAAT
TCGATGAGATTTTGGCAGGTATTGAAGAAGAAGCTCGAGTCAAACAAGGA
TTCACCTTCCGGGAACTGCTGCTTCCCGCGAATCGCTACCGGCTGTTCAT
CGCCTTTACGATTCAGCTAGCGGCGCAACTTACCGGAAATACGTCCCTGG
CGTATTACGCCACTCAAATCTTTACCGCCGTTGGTGCAGGAAACTCAAGT
AAGCTGGTGACAGGCTTTTTCGGTGTGGTCAAAGTGGTCGGTGTCTCTAT
CTTCCAGATTTTCGTTATGGATCGCATCGGTCGGCGATGGCCGTTCATGA
TTGGCGCCGCCGCAATGGGATCGTTCATGCTCATCATTGCCTGCATTTTG
GCCACGCATCCGACCAGCTCCAGCGACACCGGAAGCGCCTCGCCAGCTGG
AATCGCCATGATTATCATGACATACTGTGAAGCATTCAGTTACAACATGT
CCTGGGGCCCTCTTCCCTGGCTGTACGTGGGAGAGATTTTTTCGAGCCGC
ACTCGTGAAATTGGCGTGACCGTTGGCGCAGCGTCACAATGGCTTTTCAA
TTTCATGATGTCGCAGGTCACGCCGCATGCAATTGACAACATCGGATGGA
GGATGTTTCTAATGTTTGCGATTTTCAACTACGCGATAGTTGTATATTCT
TATGTATTTCTTAAGGAGACCTCCAAATACTCTCTCGAGGAAATGCAAGG
CGTCTTTGGTGGCAGCGACCCTGCCAAGGATGATAAACTTACGACTACTG
AAACGGCAGATAAGACACATACCAGCGAGGTTGAGGACAATCAAGGGACC
AGCAGTGCAACGCCAAAAGAAGGATAAATGGGTCGGAAATTGGGCCTCTT
CCGTGCTATCTATCTGGTGTCTGCCAGCTGCATGGGCTCTTTTGCCTTTG
CATTTGACACCGGTGTTATCAGCGGTGTTCTTACTCTGTCTTCTTTCCAG
AATGACTTCGGATACACAGTGGCTCAGAAAACCTCCGTCAACTCCAATGC
CGTGTCCATCCTCCAGGCAGGTGCCTTTTTCGGCTGCTTTTTCACGACAC
CCATCGCATCCTACCTAGGCCGCCGGCTCGGCCTCATCATCAGTTCCCTT
GTATTTACCGTCGGTACCATCCTACAGGTCGTTAATTCGCATACTCTGGG
GACGTTCTATGCTGGTCGAGTGATAGCTGGTCTTGGTATCGGCGCCGCCA
CGGTGCTTATTCCCGTGTATGCGGCTGAAATGTCTCCCAAGGACCTACGT
GGCCGACTCGGTTCCTGCTTCCAGTTGTTCTTTGCCTTGGGAGTTATGGT
CGCCTACTGGGTCACGTATGCTGTGTCGATAGACCAGCCGTCCGCAACAA
AACAATGGCAAATTGCGTTGGGCTTGCAGCTTCTCCCTTCGTCTCTTCTT
CTGTTCGGTATGTGCACGGTTAAGGAGAGCGCTCGGTGGCTCGCCTCCAA
GGGCAAGATCGAGAAGGCTAGAGAGTCCCTGAAATGGGTCAGAGGCGGAG
AAGAGACTGAGGAGCTCCAGCAAGAATTCGATGAGATTTTGGCAGGTATT
GAAGAAGAAGCTCGAGTCAAACAAGGATTCACCTTCCGGGAACTGCTGCT
TCCCGCGAATCGCTACCGGCTGTTCATCGCCTTTACGATTCAGCTAGCGG
CGCAACTTACCGGAAATACGTCCCTGGCGTATTACGCCACTCAAATCTTT
ACCGCCGTTGGTGCAGGAAACTCAAGTAAGCTGGTGACAGGCTTTTTCGG
TGTGGTCAAAGTGGTCGGTGTCTCTATCTTCCAGATTTTCGTTATGGATC
GCATCGGTCGGCGATGGCCGTTCATGATTGGCGCCGCCGCAATGGGATCG
TTCATGCTCATCATTGCCTGCATTTTGGCCACGCATCCGACCAGCTCCAG
CGACACCGGAAGCGCCTCGCCAGCTGGAATCGCCATGATTATCATGACAT
ACTGTGAAGCATTCAGTTACAACATGTCCTGGGGCCCTCTTCCCTGGCTG
TACGTGGGAGAGATTTTTTCGAGCCGCACTCGTGAAATTGGCGTGACCGT
TGGCGCAGCGTCACAATGGCTTTTCAATTTCATGATGTCGCAGGTCACGC
CGCATGCAATTGACAACATCGGATGGAGGATGTTTCTAATGTTTGCGATT
TTCAACTACGCGATAGTTGTATATTCTTATGTATTTCTTAAGGAGACCTC
CAAATACTCTCTCGAGGAAATGCAAGGCGTCTTTGGTGGCAGCGACCCTG
CCAAGGATGATAAACTTACGACTACTGAAACGGCAGATAAGACACATACC
AGCGAGGTTGAGGACAATCAAGGGACCAGCAGTGCAACGCCAAAAGAAGG
ATAAATGGGTCGGAAATTGGGCCTCTTCCGTGCTATCTATCTGGTGTCTG
CCAGCTGCATGGGCTCTTTTGCCTTTGCATTTGACACCGGTGTTATCAGC
GGTGTTCTTACTCTGTCTTCTTTCCAGAATGACTTCGGATACACAGTGGC
TCAGAAAACCTCCGTCAACTCCAATGCCGTGTCCATCCTCCAGGCAGGTG
CCTTTTTCGGCTGCTTTTTCACGACACCCATCGCATCCTACCTAGGCCGC
CGGCTCGGCCTCATCATCAGTTCCCTTGTATTTACCGTCGGTACCATCCT
ACAGGTCGTTAATTCGCATACTCTGGGGACGTTCTATGCTGGTCGAGTGA
TAGCTGGTCTTGGTATCGGCGCCGCCACGGTGCTTATTCCCGTGTATGCG
GCTGAAATGTCTCCCAAGGACCTACGTGGCCGACTCGGTTCCTGCTTCCA
GTTGTTCTTTGCCTTGGGAGTTATGGTCGCCTACTGGGTCACGTATGCTG
TGTCGATAGACCAGCCGTCCGCAACAAAACAATGGCAAATTGCGTTGGGC
TTGCAGCTTCTCCCTTCGTCTCTTCTTCTGTTCGGTATGTGCACGGTTAA
GGAGAGCGCTCGGTGGCTCGCCTCCAAGGGCAAGATCGAGAAGGCTAGAG
AGTCCCTGAAATGGGTCAGAGGCGGAGAAGAGACTGAGGAGCTCCAGCAA
GAATTCGATGAGATTTTGGCAGGTATTGAAGAAGAAGCTCGAGTCAAACA
AGGATTCACCTTCCGGGAACTGCTGCTTCCCGCGAATCGCTACCGGCTGT
TCATCGCCTTTACGATTCAGCTAGCGGCGCAACTTACCGGAAATACGTCC
CTGGCGTATTACGCCACTCAAATCTTTACCGCCGTTGGTGCAGGAAACTC
AAGTAAGCTGGTGACAGGCTTTTTCGGTGTGGTCAAAGTGGTCGGTGTCT
CTATCTTCCAGATTTTCGTTATGGATCGCATCGGTCGGCGATGGCCGTTC
ATGATTGGCGCCGCCGCAATGGGATCGTTCATGCTCATCATTGCCTGCAT
TTTGGCCACGCATCCGACCAGCTCCAGCGACACCGGAAGCGCCTCGCCAG
CTGGAATCGCCATGATTATCATGACATACTGTGAAGCATTCAGTTACAAC
ATGTCCTGGGGCCCTCTTCCCTGGCTGTACGTGGGAGAGATTTTTTCGAG
CCGCACTCGTGAAATTGGCGTGACCGTTGGCGCAGCGTCACAATGGCTTT
TCAATTTCATGATGTCGCAGGTCACGCCGCATGCAATTGACAACATCGGA
TGGAGGATGTTTCTAATGTTTGCGATTTTCAACTACGCGATAGTTGTATA
TTCTTATGTATTTCTTAAGGAGACCTCCAAATACTCTCTCGAGGAAATGC
AAGGCGTCTTTGGTGGCAGCGACCCTGCCAAGGATGATAAACTTACGACT
ACTGAAACGGCAGATAAGACACATACCAGCGAGGTTGAGGACAATCAAGG
GACCAGCAGTGCAACGCCAAAAGAAGGATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
GO:0016020membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002602KJC3_002602Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002602-T1KJC3_002602-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002602-T1.utr5p1KJC3_002602-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_002602-T1.utr5p2KJC3_002602-T1.utr5p2Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002602-T1.exon1KJC3_002602-T1.exon1Aspergillus niger KJC3exon
KJC3_002602-T1.exon2KJC3_002602-T1.exon2Aspergillus niger KJC3exon
KJC3_002602-T1.exon3KJC3_002602-T1.exon3Aspergillus niger KJC3exon
KJC3_002602-T1.exon4KJC3_002602-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002602-T1.cdsKJC3_002602-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002602-T1.utr3p1KJC3_002602-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteantiSMASH:Cluster_2.15
NoteSMCOG1169:sugar transport protein
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR005828
DBxrefInterPro:IPR003663
DBxrefPFAM:PF00083
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3038684..3041495 +
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