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KJC3_002610-T1, KJC3_002610-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002610-T1
Unique NameKJC3_002610-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3065000..3066067-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002610-T1 ID=KJC3_002610-T1|Name=KJC3_002610-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1068bp|location=Sequence derived from alignment at ch2:3065000..3066067- (Aspergillus niger KJC3)
ATGAGCACCATCCAAAGATCAGAATACTTTCTACTCACGGCTATTCTCAC
CATTGCGTCGAGAGACGACCCCCACCTTTCACTTACCCATCGCTACTGCT
GGGATCACACTCAACGCCTCCTGGTGGATGTACTTCTGGCGCACCCTTGG
ACCCAAACCCCAGCAACTGTCCAGGGGCTGTTGCTATTAGCGGAGTGGCT
TCCCCATATCCAAGTTCATGAAACATCATCTGAATTGCCAAAGAATTTAT
TCAGCGAAGATAGAACAGCTTGGTCGCTTGTTGGGCTCGCAGTGCGGCAG
GGCTATCTCCAGCGCCTCGACCAAGCCGCCTTTCGTAGTTTCAATCACAG
TGGGTCAAAGCAACGAACAGAGCAAGACAGAATTGTCTGGGCATGTAAGT
CTTTATAGTTTGCAACTTTGGTTTTCTCAATGTGCCTTCTGACACCACTC
CCAGATATATTCATTGCCGATCGCCAGATTTCAGTCCGACTTGGGCAGTC
ATTCTGGTCCCGAGGCCCGTCTCTTGCCGCGAAATTCACGGCCGACGATT
TCCCGAGTCTACAGCCACGTCCGGAGAACGACAATGAGGATTATGCATCT
TGGTTGCAAGCCTCTATGGAATTGATACAAATCTTGCATAATGCTCATGC
AATTCTTTACTCGTCCAAGGACCGAACATTAGCAATGGTTTACGAAGGTG
ATTACGCGCGGTATCTCGACGACTTTCGAACTTCTGCAACTACGTGGCGT
TCGGCATGGGGCAATCTAGCTGTGTCTCCGAAGATAAAGACCACCCTTCT
TATCATGTACGAATATATTTGCCTTTATACGAATGCCTTTTCCTTCCAGG
CAGTTCTGACGAGGGCTTCCCGTCCACACCGATCGTCGACCAAAAGACAG
CAGAGGGAGCGCCCATTTGCCGACATATTATCCAAGGGCATCATGGCATC
CCCGGATGGTCGGTACATATTTGATGCTATTAGTGCAGCGATGAGTTTGC
TGAAGTTGATGAACAATCTCGACCCCCAGCATGTTTTATGCTACCTACCG
TCTCGTTACTATTTGTAA
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Coding sequence (CDS) from alignment at ch2:3065000..3066067-

>KJC3_002610-T1 ID=KJC3_002610-T1|Name=KJC3_002610-T1|organism=Aspergillus niger KJC3|type=CDS|length=2016bp|location=Sequence derived from alignment at ch2:3065000..3066067- (Aspergillus niger KJC3)
ATATATTCATTGCCGATCGCCAGATTTCAGTCCGACTTGGGCAGTCATTC
TGGTCCCGAGGCCCGTCTCTTGCCGCGAAATTCACGGCCGACGATTTCCC
GAGTCTACAGCCACGTCCGGAGAACGACAATGAGGATTATGCATCTTGGT
TGCAAGCCTCTATGGAATTGATACAAATCTTGCATAATGCTCATGCAATT
CTTTACTCGTCCAAGGACCGAACATTAGCAATGGTTTACGAAGGTGATTA
CGCGCGGTATCTCGACGACTTTCGAACTTCTGCAACTACGTGGCGTTCGG
CATGGGGCAATCTAGCTGTGTCTCCGAAGATAAAGACCACCCTTCTTATC
ATGTACGAATATATTTGCCTTTATACGAATGCCTTTTCCTTCCAGGCAGT
TCTGACGAGGGCTTCCCGTCCACACCGATCGTCGACCAAAAGACAGCAGA
GGGAGCGCCCATTTGCCGACATATTATCCAAGGGCATCATGGCATCCCCG
GATGGTCGGTACATATTTGATGCTATTAGTGCAGCGATGAGTTTGCTGAA
GTTGATGAACAATCTCGACCCCCAGCATGTTTTATGCTACCTACCGTCTC
GTTACTATTTGTAAATGAGCACCATCCAAAGATCAGAATACTTTCTACTC
ACGGCTATTCTCACCATTGCGTCGAGAGACGACCCCCACCTTTCACTTAC
CCATCGCTACTGCTGGGATCACACTCAACGCCTCCTGGTGGATGTACTTC
TGGCGCACCCTTGGACCCAAACCCCAGCAACTGTCCAGGGGCTGTTGCTA
TTAGCGGAGTGGCTTCCCCATATCCAAGTTCATGAAACATCATCTGAATT
GCCAAAGAATTTATTCAGCGAAGATAGAACAGCTTGGTCGCTTGTTGGGC
TCGCAGTGCGGCAGGGCTATCTCCAGCGCCTCGACCAAGCCGCCTTTCGT
AGTTTCAATCACAGTGGGTCAAAGCAACGAACAGAGCAAGACAGAATTGT
CTGGGCATATATATTCATTGCCGATCGCCAGATTTCAGTCCGACTTGGGC
AGTCATTCTGGTCCCGAGGCCCGTCTCTTGCCGCGAAATTCACGGCCGAC
GATTTCCCGAGTCTACAGCCACGTCCGGAGAACGACAATGAGGATTATGC
ATCTTGGTTGCAAGCCTCTATGGAATTGATACAAATCTTGCATAATGCTC
ATGCAATTCTTTACTCGTCCAAGGACCGAACATTAGCAATGGTTTACGAA
GGTGATTACGCGCGGTATCTCGACGACTTTCGAACTTCTGCAACTACGTG
GCGTTCGGCATGGGGCAATCTAGCTGTGTCTCCGAAGATAAAGACCACCC
TTCTTATCATGTACGAATATATTTGCCTTTATACGAATGCCTTTTCCTTC
CAGGCAGTTCTGACGAGGGCTTCCCGTCCACACCGATCGTCGACCAAAAG
ACAGCAGAGGGAGCGCCCATTTGCCGACATATTATCCAAGGGCATCATGG
CATCCCCGGATGGTCGGTACATATTTGATGCTATTAGTGCAGCGATGAGT
TTGCTGAAGTTGATGAACAATCTCGACCCCCAGCATGTTTTATGCTACCT
ACCGTCTCGTTACTATTTGTAAATGAGCACCATCCAAAGATCAGAATACT
TTCTACTCACGGCTATTCTCACCATTGCGTCGAGAGACGACCCCCACCTT
TCACTTACCCATCGCTACTGCTGGGATCACACTCAACGCCTCCTGGTGGA
TGTACTTCTGGCGCACCCTTGGACCCAAACCCCAGCAACTGTCCAGGGGC
TGTTGCTATTAGCGGAGTGGCTTCCCCATATCCAAGTTCATGAAACATCA
TCTGAATTGCCAAAGAATTTATTCAGCGAAGATAGAACAGCTTGGTCGCT
TGTTGGGCTCGCAGTGCGGCAGGGCTATCTCCAGCGCCTCGACCAAGCCG
CCTTTCGTAGTTTCAATCACAGTGGGTCAAAGCAACGAACAGAGCAAGAC
AGAATTGTCTGGGCAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002610KJC3_002610Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002610-T1KJC3_002610-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002610-T1.cdsKJC3_002610-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002610-T1.exon2KJC3_002610-T1.exon2Aspergillus niger KJC3exon
KJC3_002610-T1.exon1KJC3_002610-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
NoteantiSMASH:Cluster_2.15
DBxrefInterPro:IPR007219
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3065000..3066067 -
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