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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3076653..3077702- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002613-T1 ID=KJC3_002613-T1|Name=KJC3_002613-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1050bp|location=Sequence derived from alignment at ch2:3076653..3077702- (Aspergillus niger KJC3)
AGTGACATTAGCATTGAAAGGTTATTCGTTACTCTAGGCCAAGACCAATT
CCTTTCTAGCCCCCCAGCTACACGCGATCATAGCATCATGTTAGCAAACC
CCAACAGGCTGTTCCTGTTGACAACAGCATTTATTGGAAATGTCCTTTCT
CTACCAGCCACAGTAGATTATGATGGTGAGCCCCTACCACACCTAAACCC
CTACCACACCACCATGCCCCAAAATAACCTAACTCAACCCAAACAGTTCT
TCCCAGTTCCGGCTCCGTCCTCAATCTCGACGTCGCAGCCAGCAACATCA
CCTACACCGTGCAAGAGAATGACACCATTCACACCATAGCGGCCAAATAC
AATGTCGGCGCCTGCGACCTCGCCCGTCTAAATGTCCTCGCCGATCCTAA
CTTTCTCTACGCAAACGAGACCCTCCGGATTCCCGCCCGCGCTACCTTCC
CCGACGACTACTCCTGCTTCAGCACGAACAACACCGACGCAACAGCCACA
TGCATCTACGGTGGACCCCACGTGTATACCATCTTACCCGGGGATACGAT
TCAGAAGATCGCCAACGAGCGGTACAATATCACGACAGATTCGATCCTCA
GCTTTACTGCCCAGACGGGATACATTGCTGCTTTGAATCCTGGTATTTAC
GATGTGCTGGAGACCGGACAGACCGTGAAGATCCCGAGTTGTGATAATTC
GGCGTGTACGATGGCGGATTTTACGTTTACGTATGGCACGTTGCAGGATT
TTGCCACGGCGTACAACGTTAGTGTGGGACAGATTATGTCCTTGAACTTG
GGGTATAATCATACGGATTATATTGCGCCATTGGGGGTCGTGTATGATTG
TACTTTGCTGGATTGAGTGGGGAGTGTGTATTTTTGATACCATTCGTGGC
TTATATCTCCCTTGAATACCGAGGCCGACGGCTACTCTTCTCTGTACGTA
TTGCCTACAAAATGCTGTATGCTGGGAGAAGCAAAGAAGTATCCCAATGA
ATCACTCTCCGAGAAGAATATCAATTGTGGTTGAGCGAACCAAAAAGGAG
back to topCoding sequence (CDS) from alignment at ch2:3076653..3077702- >KJC3_002613-T1 ID=KJC3_002613-T1|Name=KJC3_002613-T1|organism=Aspergillus niger KJC3|type=CDS|length=1416bp|location=Sequence derived from alignment at ch2:3076653..3077702- (Aspergillus niger KJC3)
TTCTTCCCAGTTCCGGCTCCGTCCTCAATCTCGACGTCGCAGCCAGCAAC
ATCACCTACACCGTGCAAGAGAATGACACCATTCACACCATAGCGGCCAA
ATACAATGTCGGCGCCTGCGACCTCGCCCGTCTAAATGTCCTCGCCGATC
CTAACTTTCTCTACGCAAACGAGACCCTCCGGATTCCCGCCCGCGCTACC
TTCCCCGACGACTACTCCTGCTTCAGCACGAACAACACCGACGCAACAGC
CACATGCATCTACGGTGGACCCCACGTGTATACCATCTTACCCGGGGATA
CGATTCAGAAGATCGCCAACGAGCGGTACAATATCACGACAGATTCGATC
CTCAGCTTTACTGCCCAGACGGGATACATTGCTGCTTTGAATCCTGGTAT
TTACGATGTGCTGGAGACCGGACAGACCGTGAAGATCCCGAGTTGTGATA
ATTCGGCGTGTACGATGGCGGATTTTACGTTTACGTATGGCACGTTGCAG
GATTTTGCCACGGCGTACAACGTTAGTGTGGGACAGATTATGTCCTTGAA
CTTGGGGTATAATCATACGGATTATATTGCGCCATTGGGGGTCGTGTATG
ATTGTACTTTGCTGGATTGAATGTTAGCAAACCCCAACAGGCTGTTCCTG
TTGACAACAGCATTTATTGGAAATGTCCTTTCTCTACCAGCCACAGTAGA
TTATGATGTTCTTCCCAGTTCCGGCTCCGTCCTCAATCTCGACGTCGCAG
CCAGCAACATCACCTACACCGTGCAAGAGAATGACACCATTCACACCATA
GCGGCCAAATACAATGTCGGCGCCTGCGACCTCGCCCGTCTAAATGTCCT
CGCCGATCCTAACTTTCTCTACGCAAACGAGACCCTCCGGATTCCCGCCC
GCGCTACCTTCCCCGACGACTACTCCTGCTTCAGCACGAACAACACCGAC
GCAACAGCCACATGCATCTACGGTGGACCCCACGTGTATACCATCTTACC
CGGGGATACGATTCAGAAGATCGCCAACGAGCGGTACAATATCACGACAG
ATTCGATCCTCAGCTTTACTGCCCAGACGGGATACATTGCTGCTTTGAAT
CCTGGTATTTACGATGTGCTGGAGACCGGACAGACCGTGAAGATCCCGAG
TTGTGATAATTCGGCGTGTACGATGGCGGATTTTACGTTTACGTATGGCA
CGTTGCAGGATTTTGCCACGGCGTACAACGTTAGTGTGGGACAGATTATG
TCCTTGAACTTGGGGTATAATCATACGGATTATATTGCGCCATTGGGGGT
CGTGTATGATTGTACTTTGCTGGATTGAATGTTAGCAAACCCCAACAGGC
TGTTCCTGTTGACAACAGCATTTATTGGAAATGTCCTTTCTCTACCAGCC
ACAGTAGATTATGATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002613-T1.utr3p1 | KJC3_002613-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002613-T1.utr5p1 | KJC3_002613-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| DBxref | InterPro:IPR036779 |
| DBxref | InterPro:IPR018392 |
| DBxref | PFAM:PF01476 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3076653..3077702 - |
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