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KJC3_002634-T1, KJC3_002634-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002634-T1
Unique NameKJC3_002634-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3126773..3128200-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002634-T1 ID=KJC3_002634-T1|Name=KJC3_002634-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1428bp|location=Sequence derived from alignment at ch2:3126773..3128200- (Aspergillus niger KJC3)
CGAGTTCATGCGACTTTCCTTCATTGCACCAACTTGAATTTCATCGACTT
TCCCATCCTGTCTCAATTCTGCCTCTCATTGTAAAATGGCAGACATCACG
ATAACAGAGAGCGAGTTTAAACTCGCGGACGGAACCGTCCTTTACCAGAA
GACCTGGTCGGTAAGAACACCCTCAAATCACATGTCAATCATCACAGTAA
TCCACCGACATCCTAACCTCTTCACCAGCCCGCTGCTCCCAAGGCCAAAC
TAGTACACTTTCATGGTTTCAGCGATCATATCAACAGCTACAATAACTTC
TTTCCGTTACTAGCACGCCGTGGTATCTACTGCTCTGGTATCGACGAGCG
TGGCTGGGGCCGATCGGCCCCGGCAAAGTCCGACCGGGGAAACACAGGGC
CAACCTCCTTGGTCCTGGCCGATATGGCCGCCTTCATCAAGGACCAGCAG
ACCAACGTCTTCCCTGAGCTCCCCTTGTTTATCAACGGTCACTCCATGGG
TGGTGGAATGGTGGCTACTCTCGCCTCGACCAAGGAGTATCAGCCGCTTG
TGTCCTCCCTCCGCGGGATTATGCTCTCGGCTCCGTTGATGGGGCTCACT
CCCGAGCAGACTCCTAGCTGGGTCACTGTATTCGTGGGTCGGCTGGCAGG
CAAGCTTCTCCCCCGCTTCCAGCTCGTGCAGAAAATGCGGGTGGAGACGC
TGGTGCGTGATCCCGCAGTGCAAAAGAGCCTCAAAGAGGACCAGTTGAAC
CATGCCACGGGAACGCTGGAGATGTTTGCCAACATGCTAGATCGTATGAT
GGCGCTGGATGAGGGCAAGTTGAACCTTGTTGATGGAGTGCAGTCGGTCT
TCCTGGCCCACGGAACCGGGGATAACTGTACCAGTTACGATGCGAGTAAG
AGATGGTTTGAGCGGGAGACGGCTCGGTTCCCTGAAACAGCGAAGATGCA
CAAGTCCTACGATGGATGGAGTCACGTTTTACATGCCGACCTGCCCGAGA
CTTACCCGATATATGCGGAGGATATGGCTACCTGGATCCTCGACAAGTCT
GAGGCTTAGACAACCACTTCTTAGGAGATGGCGTACATAACTTTGTTCGC
GGGGCTAATCCACGCTCGCCGGTCGGGCAGTATTATGTGCCAGTTGTGAT
CGCTCGCATAGTAATGATTGTTTCTGCCGCTACCGTCGCTCAATCTTGTT
TCTCGTTTCGGGAATATAGTATATATTGTTCTGTTCATTTGGGCCGGGTA
TCATTTGGTTGAGATTGTTTTCATTTCCGAGTTATGGTACGATATATCAT
GATTTAGTATTTTGGGCCATGGATCATTAGTGCACCTTACAGATTCGAGT
TGTCAGAAGTCTAGAACGAAGCTGAAGCTGAAGCTGGAGATGGCATGTCA
AGAACTGATAAAGCGAGCGGTGTAGAAC
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Coding sequence (CDS) from alignment at ch2:3126773..3128200-

>KJC3_002634-T1 ID=KJC3_002634-T1|Name=KJC3_002634-T1|organism=Aspergillus niger KJC3|type=CDS|length=1812bp|location=Sequence derived from alignment at ch2:3126773..3128200- (Aspergillus niger KJC3)
CCCGCTGCTCCCAAGGCCAAACTAGTACACTTTCATGGTTTCAGCGATCA
TATCAACAGCTACAATAACTTCTTTCCGTTACTAGCACGCCGTGGTATCT
ACTGCTCTGGTATCGACGAGCGTGGCTGGGGCCGATCGGCCCCGGCAAAG
TCCGACCGGGGAAACACAGGGCCAACCTCCTTGGTCCTGGCCGATATGGC
CGCCTTCATCAAGGACCAGCAGACCAACGTCTTCCCTGAGCTCCCCTTGT
TTATCAACGGTCACTCCATGGGTGGTGGAATGGTGGCTACTCTCGCCTCG
ACCAAGGAGTATCAGCCGCTTGTGTCCTCCCTCCGCGGGATTATGCTCTC
GGCTCCGTTGATGGGGCTCACTCCCGAGCAGACTCCTAGCTGGGTCACTG
TATTCGTGGGTCGGCTGGCAGGCAAGCTTCTCCCCCGCTTCCAGCTCGTG
CAGAAAATGCGGGTGGAGACGCTGGTGCGTGATCCCGCAGTGCAAAAGAG
CCTCAAAGAGGACCAGTTGAACCATGCCACGGGAACGCTGGAGATGTTTG
CCAACATGCTAGATCGTATGATGGCGCTGGATGAGGGCAAGTTGAACCTT
GTTGATGGAGTGCAGTCGGTCTTCCTGGCCCACGGAACCGGGGATAACTG
TACCAGTTACGATGCGAGTAAGAGATGGTTTGAGCGGGAGACGGCTCGGT
TCCCTGAAACAGCGAAGATGCACAAGTCCTACGATGGATGGAGTCACGTT
TTACATGCCGACCTGCCCGAGACTTACCCGATATATGCGGAGGATATGGC
TACCTGGATCCTCGACAAGTCTGAGGCTTAGATGGCAGACATCACGATAA
CAGAGAGCGAGTTTAAACTCGCGGACGGAACCGTCCTTTACCAGAAGACC
TGGTCGCCCGCTGCTCCCAAGGCCAAACTAGTACACTTTCATGGTTTCAG
CGATCATATCAACAGCTACAATAACTTCTTTCCGTTACTAGCACGCCGTG
GTATCTACTGCTCTGGTATCGACGAGCGTGGCTGGGGCCGATCGGCCCCG
GCAAAGTCCGACCGGGGAAACACAGGGCCAACCTCCTTGGTCCTGGCCGA
TATGGCCGCCTTCATCAAGGACCAGCAGACCAACGTCTTCCCTGAGCTCC
CCTTGTTTATCAACGGTCACTCCATGGGTGGTGGAATGGTGGCTACTCTC
GCCTCGACCAAGGAGTATCAGCCGCTTGTGTCCTCCCTCCGCGGGATTAT
GCTCTCGGCTCCGTTGATGGGGCTCACTCCCGAGCAGACTCCTAGCTGGG
TCACTGTATTCGTGGGTCGGCTGGCAGGCAAGCTTCTCCCCCGCTTCCAG
CTCGTGCAGAAAATGCGGGTGGAGACGCTGGTGCGTGATCCCGCAGTGCA
AAAGAGCCTCAAAGAGGACCAGTTGAACCATGCCACGGGAACGCTGGAGA
TGTTTGCCAACATGCTAGATCGTATGATGGCGCTGGATGAGGGCAAGTTG
AACCTTGTTGATGGAGTGCAGTCGGTCTTCCTGGCCCACGGAACCGGGGA
TAACTGTACCAGTTACGATGCGAGTAAGAGATGGTTTGAGCGGGAGACGG
CTCGGTTCCCTGAAACAGCGAAGATGCACAAGTCCTACGATGGATGGAGT
CACGTTTTACATGCCGACCTGCCCGAGACTTACCCGATATATGCGGAGGA
TATGGCTACCTGGATCCTCGACAAGTCTGAGGCTTAGATGGCAGACATCA
CGATAACAGAGAGCGAGTTTAAACTCGCGGACGGAACCGTCCTTTACCAG
AAGACCTGGTCG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002634KJC3_002634Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002634-T1KJC3_002634-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002634-T1.cdsKJC3_002634-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002634-T1.utr3p1KJC3_002634-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002634-T1.exon2KJC3_002634-T1.exon2Aspergillus niger KJC3exon
KJC3_002634-T1.exon1KJC3_002634-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002634-T1.utr5p1KJC3_002634-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092638EN
NoteMEROPS:MER0031618
DBxrefInterPro:IPR029058
DBxrefInterPro:IPR022742
DBxrefPFAM:PF12146
DBxrefPFAM:PF12697
DBxrefPFAM:PF00561
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3126773..3128200 -
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