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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3163326..3165344+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002647-T1 ID=KJC3_002647-T1|Name=KJC3_002647-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2019bp|location=Sequence derived from alignment at ch2:3163326..3165344+ (Aspergillus niger KJC3) CTTTATAAAGATCTGCACGGGCGAGCAAACATCGCTTCCGTATAGGCATA
CCTCTATTAACTGTGAATGGCTTATATGACGGACAAGGATCCGGGAGAAA
TTTCGGGGAAATTTCAACGCTGAGCATGCGACTATCAGATTGGGGAAATG
AAAGGCGTCTTGGCCATGATATTTATATAGCTCGCTTCTCCGTGCGAGTA
GATGGCTATACTTTTCTGCCACTCACAGGTCTCTCAGAGAAGTGGAATTC
AAGAATACCAAATTGTTCGTTTTGCTTTGTTACTCCAAGATGTTGAATCC
GAAGGTTGCCTACATGGTCTGGATGACGTGCCTGGGTTTAACGTTGCCCA
GCCAGGCGCAGTCTAATGATTACCGTCCTTCATACCACTTCACACCGGAC
CAGTACTGGATGAACGAGCCAAACGGCCTGATTAAAATCGGATCCACCTG
GCACCTGTTCTTTCAACACAATCCGACGGCCAATGTATGGGGCAACATAT
GCTGGGGGCACGCTACGAGCACCGATCTGATGCACTGGGCACACAAACCC
ACTGCCATTGCGGATGAGAACGGAGTCGAAGCGTTTACCGGTACAGCCTA
TTATGATCCAAACAATACCTCTGGCCTTGGGGATTCGGCAAACCCACCCT
ACCTGGCCTGGTTCACAGGTTATACCGTTTCAAGCCAAACACAGGACCAG
CGCCTGGCTTTCAGTGTCGATAACGGGGCGACGTGGACCAAATTTCAAGG
CAACCCCATCATATCAACAAGCCAGGAAGCACCACATGATATAACGGGCG
GCCTCGAGAGTCGGGATCCAAAGGTATTCTTCCATCGCCAATCGGGGAAC
TGGATCATGGTTCTCGCCCATGGCGGGCAGGACAAGCTGTCTTTCTGGAC
GTCTGCAGACACCATAAACTGGACATGGCAGAGTGACCTGAAGTCCACCT
CGATCAACGGCCTATCGTCCGATATTACAGGGTGGGAAGTCCCCGACATG
TTTGAACTCCCGGTTGAAGGCACTGAGGAGACCACGTGGGTGGTGATGAT
GACGCCGGCTGAAGGATCCCCTACCAGTGGTAACGGGGTCTTAGCTATCA
CCGGTACTTTTGACGGGAAAAGTTTTACGGCAGATCCCGTCGATGCTTCG
ACCATGTGGCTGGACAATGGGCGTGATTTCGATGGCGCTCTGAGCTGGGT
GAACGTGCCTGCGTCCGATGGACGGCGGATTATCGCCGCCGTCATGAATA
GCTACGGTTCCAACCCGCCTACGACCACCTGGAAAGGGATGCTCTCCTTT
CCCCGGACGCTGTCGCTCAAGAAAGTTGGCACGCAGCAGCACTTTGTTCA
ACAGCCGATCACAGAGTTGGATACAATTAGTACCAGTCTGCAAACACTAG
CAAACCAGACCATTACCCCTGGCCAAACATTGCTGTCATCGATTCGGGGA
ACTGCTCTCGATGTTCGAGTTGCTTTCTACCCTGATGCTGGCTCGGTTCT
GTCCCTCGCCGTCCGAAAGGGTGCTTCGGAGCAAACAGTCATTAAGTACA
CCCAGTCAGATGCCACATTGTCGGTTGATCGAACAGAGAGTGGAGATATC
TCGTATGACCCGGCCGCAGGTGGTGTCCATACCGCCAAGTTGGAAGAGGA
CGGCACCGGACTGGTTTCCATCCGGGTGTTGGTGGATACGTGTTCTGTAG
AGGTTTTTGGCGGACAAGGAGAGGCCGTCATTTCCGACCTCATCTTCCCG
AGTGACAGTTCCGACGGCCTGGCCTTGGAGGTTACTGGCGGAAACGCAGT
GCTGCAGTCGGTGGACGTGCGGAGTGTTTCACTTGAATGAAGGAGGCGTG
GGAGGCTGCCAGACGGGGGAAGGGGATTAAGACGGTGATTGAGGGCCTAG
GTAGGAGGGTGAGGACTGGATATTGAAGTTGTGCTGTCTGGGCTAGAAGT
ATACTAATGAAAGTCCATCTTTCAAGTGATTCAGAGCAGGCAGGGACCCA
ATCCTTGCTCCAAAATGGC back to topCoding sequence (CDS) from alignment at ch2:3163326..3165344+ >KJC3_002647-T1 ID=KJC3_002647-T1|Name=KJC3_002647-T1|organism=Aspergillus niger KJC3|type=CDS|length=1551bp|location=Sequence derived from alignment at ch2:3163326..3165344+ (Aspergillus niger KJC3) ATGTTGAATCCGAAGGTTGCCTACATGGTCTGGATGACGTGCCTGGGTTT AACGTTGCCCAGCCAGGCGCAGTCTAATGATTACCGTCCTTCATACCACT TCACACCGGACCAGTACTGGATGAACGAGCCAAACGGCCTGATTAAAATC GGATCCACCTGGCACCTGTTCTTTCAACACAATCCGACGGCCAATGTATG GGGCAACATATGCTGGGGGCACGCTACGAGCACCGATCTGATGCACTGGG CACACAAACCCACTGCCATTGCGGATGAGAACGGAGTCGAAGCGTTTACC GGTACAGCCTATTATGATCCAAACAATACCTCTGGCCTTGGGGATTCGGC AAACCCACCCTACCTGGCCTGGTTCACAGGTTATACCGTTTCAAGCCAAA CACAGGACCAGCGCCTGGCTTTCAGTGTCGATAACGGGGCGACGTGGACC AAATTTCAAGGCAACCCCATCATATCAACAAGCCAGGAAGCACCACATGA TATAACGGGCGGCCTCGAGAGTCGGGATCCAAAGGTATTCTTCCATCGCC AATCGGGGAACTGGATCATGGTTCTCGCCCATGGCGGGCAGGACAAGCTG TCTTTCTGGACGTCTGCAGACACCATAAACTGGACATGGCAGAGTGACCT GAAGTCCACCTCGATCAACGGCCTATCGTCCGATATTACAGGGTGGGAAG TCCCCGACATGTTTGAACTCCCGGTTGAAGGCACTGAGGAGACCACGTGG GTGGTGATGATGACGCCGGCTGAAGGATCCCCTACCAGTGGTAACGGGGT CTTAGCTATCACCGGTACTTTTGACGGGAAAAGTTTTACGGCAGATCCCG TCGATGCTTCGACCATGTGGCTGGACAATGGGCGTGATTTCGATGGCGCT CTGAGCTGGGTGAACGTGCCTGCGTCCGATGGACGGCGGATTATCGCCGC CGTCATGAATAGCTACGGTTCCAACCCGCCTACGACCACCTGGAAAGGGA TGCTCTCCTTTCCCCGGACGCTGTCGCTCAAGAAAGTTGGCACGCAGCAG CACTTTGTTCAACAGCCGATCACAGAGTTGGATACAATTAGTACCAGTCT GCAAACACTAGCAAACCAGACCATTACCCCTGGCCAAACATTGCTGTCAT CGATTCGGGGAACTGCTCTCGATGTTCGAGTTGCTTTCTACCCTGATGCT GGCTCGGTTCTGTCCCTCGCCGTCCGAAAGGGTGCTTCGGAGCAAACAGT CATTAAGTACACCCAGTCAGATGCCACATTGTCGGTTGATCGAACAGAGA GTGGAGATATCTCGTATGACCCGGCCGCAGGTGGTGTCCATACCGCCAAG TTGGAAGAGGACGGCACCGGACTGGTTTCCATCCGGGTGTTGGTGGATAC GTGTTCTGTAGAGGTTTTTGGCGGACAAGGAGAGGCCGTCATTTCCGACC TCATCTTCCCGAGTGACAGTTCCGACGGCCTGGCCTTGGAGGTTACTGGC GGAAACGCAGTGCTGCAGTCGGTGGACGTGCGGAGTGTTTCACTTGAATG A back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
Term | Definition |
GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_002647-T1.utr5p1 | KJC3_002647-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_002647-T1.utr3p1 | KJC3_002647-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
Property Name | Value |
Note | SECRETED:SignalP(1-23) |
Note | CAZy:GH32 |
DBxref | InterPro:IPR013320 |
DBxref | InterPro:IPR023296 |
DBxref | InterPro:IPR013189 |
DBxref | InterPro:IPR013148 |
DBxref | InterPro:IPR001362 |
DBxref | PFAM:PF00251 |
DBxref | PFAM:PF08244 |
Product | Extracellular endo-inulinase inu2 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch2 | supercontig | ch2:3163326..3165344 + |
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