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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3173686..3174709+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002650-T1 ID=KJC3_002650-T1|Name=KJC3_002650-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1024bp|location=Sequence derived from alignment at ch2:3173686..3174709+ (Aspergillus niger KJC3)
ATGCCTCCCATTATCCACTGCGTCCGTCACGCCCAGGTACGCCTCTATCC
GCCAGCTTTTTCCACCGATCGGCGCGGTCGCTAACAATTTCTCTCAGGGC
GTGCACAACCTCTGCGTCGCCAACCACGTCGTCCCAGACCCCCTTCTCAC
CGATCTCGGCAACGAACAATGTCGTAAACTCCGCGATACTTTCCCTCGCC
ACGCTCAGGTCGACCTCGTCACGGCCTCCCCACTCCGTCGCACCATCTAC
ACAGCCCTGCAGAGCTTCGAGCCCGTGTTCCAGTCACACCCAGACATGAA
GCTGATCGCTCTTCCGGATGCTCAGGAGACGAGCGACGTGGCTTGCGACA
CAGGAAGTGATCCGGAGGTGCTACGCAAGGAGATGGAGGAGAAGAACGTC
CCGATTGATTTGGGATTGGTGCATGATGGGTGGAACAATAAGGTCAGTTG
TTATTCTACCTGAAGTGGCGACGGGTTTAGTTAGCTGACCAGTGGCGTGG
TATAACCATATAGCAAGGCAAATACGCACCTACTCACAAGGCCATCAAGG
AGCGGGCGCGGGCAGCTCGCCGCTGGCTGAAGGCAAGACCGGAGAAGGAG
ATTGTCATTGTCACCCACGGAGGTTTCCTGCATTACTTCACGGAGGACTG
GGAGGATAGTAGCCAGTACCAGGGTATGTGCTCTGATGTGGCAATGTGCC
TCCTCAGTGCAGACAAAGGCTAATGATGGAACAGGAACCGGATGGGTCAA
CACCGAGTACCGGACGTATGAATTTACAAAGGAGGTTCACACAGATGACC
TCGAGGGATACGAGCTGGACGGAGACAATGCAACTCTGGTGGAGACGATT
GAATCGCGCGAGCGACGCGGGAAGTCTGGACCCATGCCGGACCGCGAGCA
GCAGAAGATGCTGTACGAGAAAGGTACCCAGGGATGGGACGACCAAGGCT
TGCAGCTGAGTATTGCAGAGCGGGAGGCGGCCAAGGTGCCGGAGGGTACA
GAGGTGGATGGTGTTCGAGTATAG back to topCoding sequence (CDS) from alignment at ch2:3173686..3174709+ >KJC3_002650-T1 ID=KJC3_002650-T1|Name=KJC3_002650-T1|organism=Aspergillus niger KJC3|type=CDS|length=3324bp|location=Sequence derived from alignment at ch2:3173686..3174709+ (Aspergillus niger KJC3)
ATGCCTCCCATTATCCACTGCGTCCGTCACGCCCAGGGCGTGCACAACCT
CTGCGTCGCCAACCACGTCGTCCCAGACCCCCTTCTCACCGATCTCGGCA
ACGAACAATGTCGTAAACTCCGCGATACTTTCCCTCGCCACGCTCAGGTC
GACCTCGTCACGGCCTCCCCACTCCGTCGCACCATCTACACAGCCCTGCA
GAGCTTCGAGCCCGTGTTCCAGTCACACCCAGACATGAAGCTGATCGCTC
TTCCGGATGCTCAGGAGACGAGCGACGTGGCTTGCGACACAGGAAGTGAT
CCGGAGGTGCTACGCAAGGAGATGGAGGAGAAGAACGTCCCGATTGATTT
GGGATTGGTGCATGATGGGTGGAACAATAAGCAAGGCAAATACGCACCTA
CTCACAAGGCCATCAAGGAGCGGGCGCGGGCAGCTCGCCGCTGGCTGAAG
GCAAGACCGGAGAAGGAGATTGTCATTGTCACCCACGGAGGTTTCCTGCA
TTACTTCACGGAGGACTGGGAGGATAGTAGCCAGTACCAGGGAACCGGAT
GGGTCAACACCGAGTACCGGACGTATGAATTTACAAAGGAGGTTCACACA
GATGACCTCGAGGGATACGAGCTGGACGGAGACAATGCAACTCTGGTGGA
GACGATTGAATCGCGCGAGCGACGCGGGAAGTCTGGACCCATGCCGGACC
GCGAGCAGCAGAAGATGCTGTACGAGAAAGGTACCCAGGGATGGGACGAC
CAAGGCTTGCAGCTGAGTATTGCAGAGCGGGAGGCGGCCAAGGTGCCGGA
GGGTACAGAGGTGGATGGTGTTCGAGTATAGATGCCTCCCATTATCCACT
GCGTCCGTCACGCCCAGGGCGTGCACAACCTCTGCGTCGCCAACCACGTC
GTCCCAGACCCCCTTCTCACCGATCTCGGCAACGAACAATGTCGTAAACT
CCGCGATACTTTCCCTCGCCACGCTCAGGTCGACCTCGTCACGGCCTCCC
CACTCCGTCGCACCATCTACACAGCCCTGCAGAGCTTCGAGCCCGTGTTC
CAGTCACACCCAGACATGAAGCTGATCGCTCTTCCGGATGCTCAGGAGAC
GAGCGACGTGGCTTGCGACACAGGAAGTGATCCGGAGGTGCTACGCAAGG
AGATGGAGGAGAAGAACGTCCCGATTGATTTGGGATTGGTGCATGATGGG
TGGAACAATAAGCAAGGCAAATACGCACCTACTCACAAGGCCATCAAGGA
GCGGGCGCGGGCAGCTCGCCGCTGGCTGAAGGCAAGACCGGAGAAGGAGA
TTGTCATTGTCACCCACGGAGGTTTCCTGCATTACTTCACGGAGGACTGG
GAGGATAGTAGCCAGTACCAGGGAACCGGATGGGTCAACACCGAGTACCG
GACGTATGAATTTACAAAGGAGGTTCACACAGATGACCTCGAGGGATACG
AGCTGGACGGAGACAATGCAACTCTGGTGGAGACGATTGAATCGCGCGAG
CGACGCGGGAAGTCTGGACCCATGCCGGACCGCGAGCAGCAGAAGATGCT
GTACGAGAAAGGTACCCAGGGATGGGACGACCAAGGCTTGCAGCTGAGTA
TTGCAGAGCGGGAGGCGGCCAAGGTGCCGGAGGGTACAGAGGTGGATGGT
GTTCGAGTATAGATGCCTCCCATTATCCACTGCGTCCGTCACGCCCAGGG
CGTGCACAACCTCTGCGTCGCCAACCACGTCGTCCCAGACCCCCTTCTCA
CCGATCTCGGCAACGAACAATGTCGTAAACTCCGCGATACTTTCCCTCGC
CACGCTCAGGTCGACCTCGTCACGGCCTCCCCACTCCGTCGCACCATCTA
CACAGCCCTGCAGAGCTTCGAGCCCGTGTTCCAGTCACACCCAGACATGA
AGCTGATCGCTCTTCCGGATGCTCAGGAGACGAGCGACGTGGCTTGCGAC
ACAGGAAGTGATCCGGAGGTGCTACGCAAGGAGATGGAGGAGAAGAACGT
CCCGATTGATTTGGGATTGGTGCATGATGGGTGGAACAATAAGCAAGGCA
AATACGCACCTACTCACAAGGCCATCAAGGAGCGGGCGCGGGCAGCTCGC
CGCTGGCTGAAGGCAAGACCGGAGAAGGAGATTGTCATTGTCACCCACGG
AGGTTTCCTGCATTACTTCACGGAGGACTGGGAGGATAGTAGCCAGTACC
AGGGAACCGGATGGGTCAACACCGAGTACCGGACGTATGAATTTACAAAG
GAGGTTCACACAGATGACCTCGAGGGATACGAGCTGGACGGAGACAATGC
AACTCTGGTGGAGACGATTGAATCGCGCGAGCGACGCGGGAAGTCTGGAC
CCATGCCGGACCGCGAGCAGCAGAAGATGCTGTACGAGAAAGGTACCCAG
GGATGGGACGACCAAGGCTTGCAGCTGAGTATTGCAGAGCGGGAGGCGGC
CAAGGTGCCGGAGGGTACAGAGGTGGATGGTGTTCGAGTATAGATGCCTC
CCATTATCCACTGCGTCCGTCACGCCCAGGGCGTGCACAACCTCTGCGTC
GCCAACCACGTCGTCCCAGACCCCCTTCTCACCGATCTCGGCAACGAACA
ATGTCGTAAACTCCGCGATACTTTCCCTCGCCACGCTCAGGTCGACCTCG
TCACGGCCTCCCCACTCCGTCGCACCATCTACACAGCCCTGCAGAGCTTC
GAGCCCGTGTTCCAGTCACACCCAGACATGAAGCTGATCGCTCTTCCGGA
TGCTCAGGAGACGAGCGACGTGGCTTGCGACACAGGAAGTGATCCGGAGG
TGCTACGCAAGGAGATGGAGGAGAAGAACGTCCCGATTGATTTGGGATTG
GTGCATGATGGGTGGAACAATAAGCAAGGCAAATACGCACCTACTCACAA
GGCCATCAAGGAGCGGGCGCGGGCAGCTCGCCGCTGGCTGAAGGCAAGAC
CGGAGAAGGAGATTGTCATTGTCACCCACGGAGGTTTCCTGCATTACTTC
ACGGAGGACTGGGAGGATAGTAGCCAGTACCAGGGAACCGGATGGGTCAA
CACCGAGTACCGGACGTATGAATTTACAAAGGAGGTTCACACAGATGACC
TCGAGGGATACGAGCTGGACGGAGACAATGCAACTCTGGTGGAGACGATT
GAATCGCGCGAGCGACGCGGGAAGTCTGGACCCATGCCGGACCGCGAGCA
GCAGAAGATGCTGTACGAGAAAGGTACCCAGGGATGGGACGACCAAGGCT
TGCAGCTGAGTATTGCAGAGCGGGAGGCGGCCAAGGTGCCGGAGGGTACA
GAGGTGGATGGTGTTCGAGTATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029033 |
| DBxref | InterPro:IPR013078 |
| DBxref | PFAM:PF00300 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3173686..3174709 + |
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