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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3186019..3187967- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002656-T1 ID=KJC3_002656-T1|Name=KJC3_002656-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1949bp|location=Sequence derived from alignment at ch2:3186019..3187967- (Aspergillus niger KJC3)
AACTACCGTACCTCGTTAGCCTGTCAGTCTATCACTTGGCAGGGGGTTCA
ACGGTGTCTCAAGTGACTGATACATGTCGAATCCGAGTCCAGAGGGTACC
CCTCTTGGTTGCCTTGGAGTCCCTGCCCTCTCTGTTAGAGGGCGAACCGA
CGTACGGAGCAAACACCCCTTCGTGATCTTCACCAGCCCTGGGCTCGGTG
TCTTCGAAAATGGACATACAGAGCCCCTGGCTGGCCTGTCATTGGCTCTG
CCCTGGAACAGGATGTGATGTATAGACACCGAATGTGTAGCCCCATGCAG
ATCAGGATACATCCAACGTCCCTGGAGAACCAGCCCTTCTCCCTACCCAA
AAATAGTCCTGTCAGAAAGTATTTATGAGTTCGTTGGTCTGCAGTTTGCC
TCGATTCCAAATACCTACAGCCACGAACCATCCATCACCTGCAGTCTTTA
CCGGCCCATACTCTATCCTTGCCCATAATGTCGCTAGAACAAGTGTCAGG
TGGAGGCACCGAGGGTGACTTTCAGCACCCAAACGAGAACTTACGTCGGT
CGACCATCATTGCACTTTATTTTGCCTTTATTATGTCCACGGTTGCCGTG
GCCCTACGCCTTCTCGCGAGAAAGATCACTGGGTCAAGGTTGTATCTGGA
TGACTATCTTATGATAATAGCTTTGGTATAGCCGTCGCTTGTATCCTTTC
CGAAATTCACGCTAACTGGTCACTAAAATTAAGCTTTTCAAATATGGCTG
TTCGATCGGTGTCACAATCCGTAAGTTATTATCACCCAAGATTGCCCACG
ATAAGTCTAACCGTTACAGTTTTATGGAACGGCCTTGGATGCCACATCAC
GATGATCCCGCAAAAGAACCTGACGGTTTACTTTCAAGTCCGTGTCTCCA
GATCCTCATCCCATGGTTATCACTAACCACAAACAGATCGGATGGTCCAA
CTCCTTCGTTTACACACTCTGCGTCATGTTCATTAAATTGTCTATCCTGG
CGGTCTATAAGCGACTATTCGCTGCTAGGAGCATGAAAATTGCTGCCAAC
ATTGTTGCCGTGATTGTCGTCCTCTGGGCCGTGAGCATCAGCATTGGCGG
TGTTCTGAACTGTGTTCCGGTTCAGAAATTCTGGGATCGCGCGGTCCCGG
GACACTGCGTCAATACTGTGGCCTACTACTACGGCCAGCAGATTCCCAAC
ATCCTCACAGATGTGGTTCTGCTCATCATGCCGCTGAAAAGCGTCTGGGA
ACTACCCATTTCCAAGACTCAACGGTTGTTGCTGTCGGGGGTGTTTCTGG
TCGGAATACTGTATGGCCCCGATTTCAGAATCAGCAAAAGGATTGTCTCG
TATTGACCTGATTTAGGACCCTGATTTTCGACATCTTGCGCCTGGTCGCG
ATGATTGAGCTGACGCAAGCCGGTCCAGATATTACCTGTGAGTACATGTT
TTTTTTCTCCTCTGCCCTCACATACAAGGCGCTAATGATCCCTCATAGAC
AACCAAGTCCCAGTCGTCGTGTGGACATGCATGGAGGCAGCAGTGGGAAT
CACAGCGGCATGCATGTCTCATATCCGACCTCTTTTCAACCTCAAGCTCT
GGTCTCGAATTCGCTACTCCGGCCAGGAACCTGGAAAGGGATCGACCAAC
TCGTCCGAAGAGGGTTTCTCTTCTTCCGACCGAACCCTCTTTGATCCATG
CGGAACCCAGACTACCATCTCCGCTGGCCACGAAGTGCACGCTGAGCATG
AGAAGCCATGAGGTGTTCCTACGACGGCTATCGAGCAGTATCAAAATCTA
AGGTCTTATCATCATTCGTGGAGGATTTATATGTTGGTCATGTAATGCCT
CGAATTCTTGACGCATCTTTTTCTGCATGTCTTATGTTACGATGAAGGAA
GCTCTTAATATTCGTGAGATGTATATAGTTAGTGAATTATTAATGCACA back to topCoding sequence (CDS) from alignment at ch2:3186019..3187967- >KJC3_002656-T1 ID=KJC3_002656-T1|Name=KJC3_002656-T1|organism=Aspergillus niger KJC3|type=CDS|length=6066bp|location=Sequence derived from alignment at ch2:3186019..3187967- (Aspergillus niger KJC3)
ACAACCAAGTCCCAGTCGTCGTGTGGACATGCATGGAGGCAGCAGTGGGA
ATCACAGCGGCATGCATGTCTCATATCCGACCTCTTTTCAACCTCAAGCT
CTGGTCTCGAATTCGCTACTCCGGCCAGGAACCTGGAAAGGGATCGACCA
ACTCGTCCGAAGAGGGTTTCTCTTCTTCCGACCGAACCCTCTTTGATCCA
TGCGGAACCCAGACTACCATCTCCGCTGGCCACGAAGTGCACGCTGAGCA
TGAGAAGCCATGAGACCCTGATTTTCGACATCTTGCGCCTGGTCGCGATG
ATTGAGCTGACGCAAGCCGGTCCAGATATTACCTATCGGATGGTCCAACT
CCTTCGTTTACACACTCTGCGTCATGTTCATTAAATTGTCTATCCTGGCG
GTCTATAAGCGACTATTCGCTGCTAGGAGCATGAAAATTGCTGCCAACAT
TGTTGCCGTGATTGTCGTCCTCTGGGCCGTGAGCATCAGCATTGGCGGTG
TTCTGAACTGTGTTCCGGTTCAGAAATTCTGGGATCGCGCGGTCCCGGGA
CACTGCGTCAATACTGTGGCCTACTACTACGGCCAGCAGATTCCCAACAT
CCTCACAGATGTGGTTCTGCTCATCATGCCGCTGAAAAGCGTCTGGGAAC
TACCCATTTCCAAGACTCAACGGTTGTTGCTGTCGGGGGTGTTTCTGGTC
GGAATACTTTTTATGGAACGGCCTTGGATGCCACATCACGATGATCCCGC
AAAAGAACCTGACGGTTTACTTTCAACTTTTCAAATATGGCTGTTCGATC
GGTGTCACAATCCATGTCGCTAGAACAAGTGTCAGGTGGAGGCACCGAGG
GTGACTTTCAGCACCCAAACGAGAACTTACGTCGGTCGACCATCATTGCA
CTTTATTTTGCCTTTATTATGTCCACGGTTGCCGTGGCCCTACGCCTTCT
CGCGAGAAAGATCACTGGGTCAAGGTTGTATCTGGATGACTATCTTATGA
TAATAGCTTTGACAACCAAGTCCCAGTCGTCGTGTGGACATGCATGGAGG
CAGCAGTGGGAATCACAGCGGCATGCATGTCTCATATCCGACCTCTTTTC
AACCTCAAGCTCTGGTCTCGAATTCGCTACTCCGGCCAGGAACCTGGAAA
GGGATCGACCAACTCGTCCGAAGAGGGTTTCTCTTCTTCCGACCGAACCC
TCTTTGATCCATGCGGAACCCAGACTACCATCTCCGCTGGCCACGAAGTG
CACGCTGAGCATGAGAAGCCATGAGACCCTGATTTTCGACATCTTGCGCC
TGGTCGCGATGATTGAGCTGACGCAAGCCGGTCCAGATATTACCTATCGG
ATGGTCCAACTCCTTCGTTTACACACTCTGCGTCATGTTCATTAAATTGT
CTATCCTGGCGGTCTATAAGCGACTATTCGCTGCTAGGAGCATGAAAATT
GCTGCCAACATTGTTGCCGTGATTGTCGTCCTCTGGGCCGTGAGCATCAG
CATTGGCGGTGTTCTGAACTGTGTTCCGGTTCAGAAATTCTGGGATCGCG
CGGTCCCGGGACACTGCGTCAATACTGTGGCCTACTACTACGGCCAGCAG
ATTCCCAACATCCTCACAGATGTGGTTCTGCTCATCATGCCGCTGAAAAG
CGTCTGGGAACTACCCATTTCCAAGACTCAACGGTTGTTGCTGTCGGGGG
TGTTTCTGGTCGGAATACTTTTTATGGAACGGCCTTGGATGCCACATCAC
GATGATCCCGCAAAAGAACCTGACGGTTTACTTTCAACTTTTCAAATATG
GCTGTTCGATCGGTGTCACAATCCATGTCGCTAGAACAAGTGTCAGGTGG
AGGCACCGAGGGTGACTTTCAGCACCCAAACGAGAACTTACGTCGGTCGA
CCATCATTGCACTTTATTTTGCCTTTATTATGTCCACGGTTGCCGTGGCC
CTACGCCTTCTCGCGAGAAAGATCACTGGGTCAAGGTTGTATCTGGATGA
CTATCTTATGATAATAGCTTTGACAACCAAGTCCCAGTCGTCGTGTGGAC
ATGCATGGAGGCAGCAGTGGGAATCACAGCGGCATGCATGTCTCATATCC
GACCTCTTTTCAACCTCAAGCTCTGGTCTCGAATTCGCTACTCCGGCCAG
GAACCTGGAAAGGGATCGACCAACTCGTCCGAAGAGGGTTTCTCTTCTTC
CGACCGAACCCTCTTTGATCCATGCGGAACCCAGACTACCATCTCCGCTG
GCCACGAAGTGCACGCTGAGCATGAGAAGCCATGAGACCCTGATTTTCGA
CATCTTGCGCCTGGTCGCGATGATTGAGCTGACGCAAGCCGGTCCAGATA
TTACCTATCGGATGGTCCAACTCCTTCGTTTACACACTCTGCGTCATGTT
CATTAAATTGTCTATCCTGGCGGTCTATAAGCGACTATTCGCTGCTAGGA
GCATGAAAATTGCTGCCAACATTGTTGCCGTGATTGTCGTCCTCTGGGCC
GTGAGCATCAGCATTGGCGGTGTTCTGAACTGTGTTCCGGTTCAGAAATT
CTGGGATCGCGCGGTCCCGGGACACTGCGTCAATACTGTGGCCTACTACT
ACGGCCAGCAGATTCCCAACATCCTCACAGATGTGGTTCTGCTCATCATG
CCGCTGAAAAGCGTCTGGGAACTACCCATTTCCAAGACTCAACGGTTGTT
GCTGTCGGGGGTGTTTCTGGTCGGAATACTTTTTATGGAACGGCCTTGGA
TGCCACATCACGATGATCCCGCAAAAGAACCTGACGGTTTACTTTCAACT
TTTCAAATATGGCTGTTCGATCGGTGTCACAATCCATGTCGCTAGAACAA
GTGTCAGGTGGAGGCACCGAGGGTGACTTTCAGCACCCAAACGAGAACTT
ACGTCGGTCGACCATCATTGCACTTTATTTTGCCTTTATTATGTCCACGG
TTGCCGTGGCCCTACGCCTTCTCGCGAGAAAGATCACTGGGTCAAGGTTG
TATCTGGATGACTATCTTATGATAATAGCTTTGACAACCAAGTCCCAGTC
GTCGTGTGGACATGCATGGAGGCAGCAGTGGGAATCACAGCGGCATGCAT
GTCTCATATCCGACCTCTTTTCAACCTCAAGCTCTGGTCTCGAATTCGCT
ACTCCGGCCAGGAACCTGGAAAGGGATCGACCAACTCGTCCGAAGAGGGT
TTCTCTTCTTCCGACCGAACCCTCTTTGATCCATGCGGAACCCAGACTAC
CATCTCCGCTGGCCACGAAGTGCACGCTGAGCATGAGAAGCCATGAGACC
CTGATTTTCGACATCTTGCGCCTGGTCGCGATGATTGAGCTGACGCAAGC
CGGTCCAGATATTACCTATCGGATGGTCCAACTCCTTCGTTTACACACTC
TGCGTCATGTTCATTAAATTGTCTATCCTGGCGGTCTATAAGCGACTATT
CGCTGCTAGGAGCATGAAAATTGCTGCCAACATTGTTGCCGTGATTGTCG
TCCTCTGGGCCGTGAGCATCAGCATTGGCGGTGTTCTGAACTGTGTTCCG
GTTCAGAAATTCTGGGATCGCGCGGTCCCGGGACACTGCGTCAATACTGT
GGCCTACTACTACGGCCAGCAGATTCCCAACATCCTCACAGATGTGGTTC
TGCTCATCATGCCGCTGAAAAGCGTCTGGGAACTACCCATTTCCAAGACT
CAACGGTTGTTGCTGTCGGGGGTGTTTCTGGTCGGAATACTTTTTATGGA
ACGGCCTTGGATGCCACATCACGATGATCCCGCAAAAGAACCTGACGGTT
TACTTTCAACTTTTCAAATATGGCTGTTCGATCGGTGTCACAATCCATGT
CGCTAGAACAAGTGTCAGGTGGAGGCACCGAGGGTGACTTTCAGCACCCA
AACGAGAACTTACGTCGGTCGACCATCATTGCACTTTATTTTGCCTTTAT
TATGTCCACGGTTGCCGTGGCCCTACGCCTTCTCGCGAGAAAGATCACTG
GGTCAAGGTTGTATCTGGATGACTATCTTATGATAATAGCTTTGACAACC
AAGTCCCAGTCGTCGTGTGGACATGCATGGAGGCAGCAGTGGGAATCACA
GCGGCATGCATGTCTCATATCCGACCTCTTTTCAACCTCAAGCTCTGGTC
TCGAATTCGCTACTCCGGCCAGGAACCTGGAAAGGGATCGACCAACTCGT
CCGAAGAGGGTTTCTCTTCTTCCGACCGAACCCTCTTTGATCCATGCGGA
ACCCAGACTACCATCTCCGCTGGCCACGAAGTGCACGCTGAGCATGAGAA
GCCATGAGACCCTGATTTTCGACATCTTGCGCCTGGTCGCGATGATTGAG
CTGACGCAAGCCGGTCCAGATATTACCTATCGGATGGTCCAACTCCTTCG
TTTACACACTCTGCGTCATGTTCATTAAATTGTCTATCCTGGCGGTCTAT
AAGCGACTATTCGCTGCTAGGAGCATGAAAATTGCTGCCAACATTGTTGC
CGTGATTGTCGTCCTCTGGGCCGTGAGCATCAGCATTGGCGGTGTTCTGA
ACTGTGTTCCGGTTCAGAAATTCTGGGATCGCGCGGTCCCGGGACACTGC
GTCAATACTGTGGCCTACTACTACGGCCAGCAGATTCCCAACATCCTCAC
AGATGTGGTTCTGCTCATCATGCCGCTGAAAAGCGTCTGGGAACTACCCA
TTTCCAAGACTCAACGGTTGTTGCTGTCGGGGGTGTTTCTGGTCGGAATA
CTTTTTATGGAACGGCCTTGGATGCCACATCACGATGATCCCGCAAAAGA
ACCTGACGGTTTACTTTCAACTTTTCAAATATGGCTGTTCGATCGGTGTC
ACAATCCATGTCGCTAGAACAAGTGTCAGGTGGAGGCACCGAGGGTGACT
TTCAGCACCCAAACGAGAACTTACGTCGGTCGACCATCATTGCACTTTAT
TTTGCCTTTATTATGTCCACGGTTGCCGTGGCCCTACGCCTTCTCGCGAG
AAAGATCACTGGGTCAAGGTTGTATCTGGATGACTATCTTATGATAATAG
CTTTGACAACCAAGTCCCAGTCGTCGTGTGGACATGCATGGAGGCAGCAG
TGGGAATCACAGCGGCATGCATGTCTCATATCCGACCTCTTTTCAACCTC
AAGCTCTGGTCTCGAATTCGCTACTCCGGCCAGGAACCTGGAAAGGGATC
GACCAACTCGTCCGAAGAGGGTTTCTCTTCTTCCGACCGAACCCTCTTTG
ATCCATGCGGAACCCAGACTACCATCTCCGCTGGCCACGAAGTGCACGCT
GAGCATGAGAAGCCATGAGACCCTGATTTTCGACATCTTGCGCCTGGTCG
CGATGATTGAGCTGACGCAAGCCGGTCCAGATATTACCTATCGGATGGTC
CAACTCCTTCGTTTACACACTCTGCGTCATGTTCATTAAATTGTCTATCC
TGGCGGTCTATAAGCGACTATTCGCTGCTAGGAGCATGAAAATTGCTGCC
AACATTGTTGCCGTGATTGTCGTCCTCTGGGCCGTGAGCATCAGCATTGG
CGGTGTTCTGAACTGTGTTCCGGTTCAGAAATTCTGGGATCGCGCGGTCC
CGGGACACTGCGTCAATACTGTGGCCTACTACTACGGCCAGCAGATTCCC
AACATCCTCACAGATGTGGTTCTGCTCATCATGCCGCTGAAAAGCGTCTG
GGAACTACCCATTTCCAAGACTCAACGGTTGTTGCTGTCGGGGGTGTTTC
TGGTCGGAATACTTTTTATGGAACGGCCTTGGATGCCACATCACGATGAT
CCCGCAAAAGAACCTGACGGTTTACTTTCAACTTTTCAAATATGGCTGTT
CGATCGGTGTCACAATCCATGTCGCTAGAACAAGTGTCAGGTGGAGGCAC
CGAGGGTGACTTTCAGCACCCAAACGAGAACTTACGTCGGTCGACCATCA
TTGCACTTTATTTTGCCTTTATTATGTCCACGGTTGCCGTGGCCCTACGC
CTTCTCGCGAGAAAGATCACTGGGTCAAGGTTGTATCTGGATGACTATCT
TATGATAATAGCTTTG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002656-T1.utr3p1 | KJC3_002656-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002656-T1.utr5p1 | KJC3_002656-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
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| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch2 | supercontig | ch2:3186019..3187967 - |
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