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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3191500..3193208+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002658-T1 ID=KJC3_002658-T1|Name=KJC3_002658-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1709bp|location=Sequence derived from alignment at ch2:3191500..3193208+ (Aspergillus niger KJC3)
TAAAGCCAACCGCTGTTCGCTTCTGTTAGGCCCCTTTTCTCATTCTTTGT
TGATCGTATCCAGCGGCGTCCACCCGTTTCCTGAGGTAGGTAGAATATAT
TCAATGGCTCTCAGACCATGCAAAGTTATTGTCGCAGGAGGCGGTGTTGC
CGGGCTTTCTCTGGCACTTATGCTGGAGAAGCATGGCATTGACTTTTTGC
TTCTAGAAGCATATCCAGATGTCGTCGCTGCTGTTGGCGCTGGCATTGCC
CTAGCTCCCAATGGCCTTCGCCTTATTGAACAGTTGGGATGCTATGAGGA
TTTGCAGAAATGTTCGGCAGGCGCTGACCAAGTTCACTTTCGGAAGCCTG
ATGGAGAGATACTCTGGGGGATGGACGAAGGATTGGCTGAGGCGTGTATT
GAGAAGTGTGTCCCTCGTGCTTTCTCCCTCAAGTGTTGAATGATTTGCTT
ACCAGATGACAGGCATGGGTATACTTATGTCTGGATGGATAGGAAGTCTC
TCCTAGAGGTTTTGTACAACAACATTGCGGACAAATCGAAGGTTTTGCCT
GGCAAGCGTGTGGCCAGTGTCACGCATACCGACGAAGGTGTTGATGTTGT
CACAACTGATGGCTCAACGTACTCTGCCGATATTATCGTTGGAACGGACG
GTACCCACTCCAAGCTGAGGCAGGAAATGGCTAGATACGCCAAAGTCCTT
GGGCTGAGCAAGGATTATGCGGAAGAAGACAGTCAGTTGAGCATCACACT
TGTTTTTCCATGGATAGGATGTGATATTCTCTAACCGATCTGGCATAATG
CAGAGGTTGCTGCCGCTTACAGTTGTATCTTTGGGATGTCTGATCCCGTC
GCAGGCTTCCCCAGTCGCTCACTTGAATTCGTGACGAACGAAGGGTTTTC
ATATGTGCTAGGCGCTGGTCCTGCTGACCGTGTCTATTGGTTCCTGATGA
AGAAGATGAAGCAGACATACTGTGGCGCTGACATCCCCCAATTCACTGAA
GAAGATAAGCAGCGCACGCTCCAAAAGCATTGGAATGACCAGGTCACGCC
AGATGTTCGCCTGTCTGATCTCTGCGAGCGTCAGTTGAGCACAACATATA
CACCCATTCCAGAGTTTGTCTACAAGAAGTGGCACCTGGGAAGAATTATT
ACCATTGGAGACGCCTGCCACAAGGTGAGGAGACCAAACCCCCTACTATC
CGCGTCATACTGTGACTAACTAATAGATGATATCGATACAGGTCCTCCCT
ATTACCGCGCAAGGGGGCAATCAGGCTTTAGAAAGCGCCGCGGCTGTGGT
AAATGGTTTGATGACAGCGTTATCGCAGGCTTCGGGCTCAGGCCCGCTCT
CCCAGGCGGAGATTCAGTCGATGTTCGAGCGAGTGCAGGACATCCGCGAG
CCGCGCACCTTTGATATTATCAAAACCACTCATCAACGACAGAAGTTGGA
TTCAATGGATACTCCGGAGCTGAAAGAGTTTCTGCTTACTAAGTATGCAG
GGCTGATGCCAGGAGCATTGTGGAAACGATGGGCGGATACATTTACCCCG
GCCGTGTCTTTGAATATGCTCGATCTGCCTGCTAGACCGAAGAGTGTTCC
CTTTGACGATGAGGCCCTGAGAAATGCAGGAAGCAATAATGCTCTAGCGG
CACACCTGTAGTTAGATTACAATGTGAAAGGCACTAGTTACTCCGTACTA
GTTAATGAC back to topCoding sequence (CDS) from alignment at ch2:3191500..3193208+ >KJC3_002658-T1 ID=KJC3_002658-T1|Name=KJC3_002658-T1|organism=Aspergillus niger KJC3|type=CDS|length=5448bp|location=Sequence derived from alignment at ch2:3191500..3193208+ (Aspergillus niger KJC3)
ATGGCTCTCAGACCATGCAAAGTTATTGTCGCAGGAGGCGGTGTTGCCGG
GCTTTCTCTGGCACTTATGCTGGAGAAGCATGGCATTGACTTTTTGCTTC
TAGAAGCATATCCAGATGTCGTCGCTGCTGTTGGCGCTGGCATTGCCCTA
GCTCCCAATGGCCTTCGCCTTATTGAACAGTTGGGATGCTATGAGGATTT
GCAGAAATGTTCGGCAGGCGCTGACCAAGTTCACTTTCGGAAGCCTGATG
GAGAGATACTCTGGGGGATGGACGAAGGATTGGCTGAGGCGTGTATTGAG
AAGCATGGGTATACTTATGTCTGGATGGATAGGAAGTCTCTCCTAGAGGT
TTTGTACAACAACATTGCGGACAAATCGAAGGTTTTGCCTGGCAAGCGTG
TGGCCAGTGTCACGCATACCGACGAAGGTGTTGATGTTGTCACAACTGAT
GGCTCAACGTACTCTGCCGATATTATCGTTGGAACGGACGGTACCCACTC
CAAGCTGAGGCAGGAAATGGCTAGATACGCCAAAGTCCTTGGGCTGAGCA
AGGATTATGCGGAAGAAGACAAGGTTGCTGCCGCTTACAGTTGTATCTTT
GGGATGTCTGATCCCGTCGCAGGCTTCCCCAGTCGCTCACTTGAATTCGT
GACGAACGAAGGGTTTTCATATGTGCTAGGCGCTGGTCCTGCTGACCGTG
TCTATTGGTTCCTGATGAAGAAGATGAAGCAGACATACTGTGGCGCTGAC
ATCCCCCAATTCACTGAAGAAGATAAGCAGCGCACGCTCCAAAAGCATTG
GAATGACCAGGTCACGCCAGATGTTCGCCTGTCTGATCTCTGCGAGCGTC
AGTTGAGCACAACATATACACCCATTCCAGAGTTTGTCTACAAGAAGTGG
CACCTGGGAAGAATTATTACCATTGGAGACGCCTGCCACAAGGTCCTCCC
TATTACCGCGCAAGGGGGCAATCAGGCTTTAGAAAGCGCCGCGGCTGTGG
TAAATGGTTTGATGACAGCGTTATCGCAGGCTTCGGGCTCAGGCCCGCTC
TCCCAGGCGGAGATTCAGTCGATGTTCGAGCGAGTGCAGGACATCCGCGA
GCCGCGCACCTTTGATATTATCAAAACCACTCATCAACGACAGAAGTTGG
ATTCAATGGATACTCCGGAGCTGAAAGAGTTTCTGCTTACTAAGTATGCA
GGGCTGATGCCAGGAGCATTGTGGAAACGATGGGCGGATACATTTACCCC
GGCCGTGTCTTTGAATATGCTCGATCTGCCTGCTAGACCGAAGAGTGTTC
CCTTTGACGATGAGGCCCTGAGAAATGCAGGAAGCAATAATGCTCTAGCG
GCACACCTGTAGATGGCTCTCAGACCATGCAAAGTTATTGTCGCAGGAGG
CGGTGTTGCCGGGCTTTCTCTGGCACTTATGCTGGAGAAGCATGGCATTG
ACTTTTTGCTTCTAGAAGCATATCCAGATGTCGTCGCTGCTGTTGGCGCT
GGCATTGCCCTAGCTCCCAATGGCCTTCGCCTTATTGAACAGTTGGGATG
CTATGAGGATTTGCAGAAATGTTCGGCAGGCGCTGACCAAGTTCACTTTC
GGAAGCCTGATGGAGAGATACTCTGGGGGATGGACGAAGGATTGGCTGAG
GCGTGTATTGAGAAGCATGGGTATACTTATGTCTGGATGGATAGGAAGTC
TCTCCTAGAGGTTTTGTACAACAACATTGCGGACAAATCGAAGGTTTTGC
CTGGCAAGCGTGTGGCCAGTGTCACGCATACCGACGAAGGTGTTGATGTT
GTCACAACTGATGGCTCAACGTACTCTGCCGATATTATCGTTGGAACGGA
CGGTACCCACTCCAAGCTGAGGCAGGAAATGGCTAGATACGCCAAAGTCC
TTGGGCTGAGCAAGGATTATGCGGAAGAAGACAAGGTTGCTGCCGCTTAC
AGTTGTATCTTTGGGATGTCTGATCCCGTCGCAGGCTTCCCCAGTCGCTC
ACTTGAATTCGTGACGAACGAAGGGTTTTCATATGTGCTAGGCGCTGGTC
CTGCTGACCGTGTCTATTGGTTCCTGATGAAGAAGATGAAGCAGACATAC
TGTGGCGCTGACATCCCCCAATTCACTGAAGAAGATAAGCAGCGCACGCT
CCAAAAGCATTGGAATGACCAGGTCACGCCAGATGTTCGCCTGTCTGATC
TCTGCGAGCGTCAGTTGAGCACAACATATACACCCATTCCAGAGTTTGTC
TACAAGAAGTGGCACCTGGGAAGAATTATTACCATTGGAGACGCCTGCCA
CAAGGTCCTCCCTATTACCGCGCAAGGGGGCAATCAGGCTTTAGAAAGCG
CCGCGGCTGTGGTAAATGGTTTGATGACAGCGTTATCGCAGGCTTCGGGC
TCAGGCCCGCTCTCCCAGGCGGAGATTCAGTCGATGTTCGAGCGAGTGCA
GGACATCCGCGAGCCGCGCACCTTTGATATTATCAAAACCACTCATCAAC
GACAGAAGTTGGATTCAATGGATACTCCGGAGCTGAAAGAGTTTCTGCTT
ACTAAGTATGCAGGGCTGATGCCAGGAGCATTGTGGAAACGATGGGCGGA
TACATTTACCCCGGCCGTGTCTTTGAATATGCTCGATCTGCCTGCTAGAC
CGAAGAGTGTTCCCTTTGACGATGAGGCCCTGAGAAATGCAGGAAGCAAT
AATGCTCTAGCGGCACACCTGTAGATGGCTCTCAGACCATGCAAAGTTAT
TGTCGCAGGAGGCGGTGTTGCCGGGCTTTCTCTGGCACTTATGCTGGAGA
AGCATGGCATTGACTTTTTGCTTCTAGAAGCATATCCAGATGTCGTCGCT
GCTGTTGGCGCTGGCATTGCCCTAGCTCCCAATGGCCTTCGCCTTATTGA
ACAGTTGGGATGCTATGAGGATTTGCAGAAATGTTCGGCAGGCGCTGACC
AAGTTCACTTTCGGAAGCCTGATGGAGAGATACTCTGGGGGATGGACGAA
GGATTGGCTGAGGCGTGTATTGAGAAGCATGGGTATACTTATGTCTGGAT
GGATAGGAAGTCTCTCCTAGAGGTTTTGTACAACAACATTGCGGACAAAT
CGAAGGTTTTGCCTGGCAAGCGTGTGGCCAGTGTCACGCATACCGACGAA
GGTGTTGATGTTGTCACAACTGATGGCTCAACGTACTCTGCCGATATTAT
CGTTGGAACGGACGGTACCCACTCCAAGCTGAGGCAGGAAATGGCTAGAT
ACGCCAAAGTCCTTGGGCTGAGCAAGGATTATGCGGAAGAAGACAAGGTT
GCTGCCGCTTACAGTTGTATCTTTGGGATGTCTGATCCCGTCGCAGGCTT
CCCCAGTCGCTCACTTGAATTCGTGACGAACGAAGGGTTTTCATATGTGC
TAGGCGCTGGTCCTGCTGACCGTGTCTATTGGTTCCTGATGAAGAAGATG
AAGCAGACATACTGTGGCGCTGACATCCCCCAATTCACTGAAGAAGATAA
GCAGCGCACGCTCCAAAAGCATTGGAATGACCAGGTCACGCCAGATGTTC
GCCTGTCTGATCTCTGCGAGCGTCAGTTGAGCACAACATATACACCCATT
CCAGAGTTTGTCTACAAGAAGTGGCACCTGGGAAGAATTATTACCATTGG
AGACGCCTGCCACAAGGTCCTCCCTATTACCGCGCAAGGGGGCAATCAGG
CTTTAGAAAGCGCCGCGGCTGTGGTAAATGGTTTGATGACAGCGTTATCG
CAGGCTTCGGGCTCAGGCCCGCTCTCCCAGGCGGAGATTCAGTCGATGTT
CGAGCGAGTGCAGGACATCCGCGAGCCGCGCACCTTTGATATTATCAAAA
CCACTCATCAACGACAGAAGTTGGATTCAATGGATACTCCGGAGCTGAAA
GAGTTTCTGCTTACTAAGTATGCAGGGCTGATGCCAGGAGCATTGTGGAA
ACGATGGGCGGATACATTTACCCCGGCCGTGTCTTTGAATATGCTCGATC
TGCCTGCTAGACCGAAGAGTGTTCCCTTTGACGATGAGGCCCTGAGAAAT
GCAGGAAGCAATAATGCTCTAGCGGCACACCTGTAGATGGCTCTCAGACC
ATGCAAAGTTATTGTCGCAGGAGGCGGTGTTGCCGGGCTTTCTCTGGCAC
TTATGCTGGAGAAGCATGGCATTGACTTTTTGCTTCTAGAAGCATATCCA
GATGTCGTCGCTGCTGTTGGCGCTGGCATTGCCCTAGCTCCCAATGGCCT
TCGCCTTATTGAACAGTTGGGATGCTATGAGGATTTGCAGAAATGTTCGG
CAGGCGCTGACCAAGTTCACTTTCGGAAGCCTGATGGAGAGATACTCTGG
GGGATGGACGAAGGATTGGCTGAGGCGTGTATTGAGAAGCATGGGTATAC
TTATGTCTGGATGGATAGGAAGTCTCTCCTAGAGGTTTTGTACAACAACA
TTGCGGACAAATCGAAGGTTTTGCCTGGCAAGCGTGTGGCCAGTGTCACG
CATACCGACGAAGGTGTTGATGTTGTCACAACTGATGGCTCAACGTACTC
TGCCGATATTATCGTTGGAACGGACGGTACCCACTCCAAGCTGAGGCAGG
AAATGGCTAGATACGCCAAAGTCCTTGGGCTGAGCAAGGATTATGCGGAA
GAAGACAAGGTTGCTGCCGCTTACAGTTGTATCTTTGGGATGTCTGATCC
CGTCGCAGGCTTCCCCAGTCGCTCACTTGAATTCGTGACGAACGAAGGGT
TTTCATATGTGCTAGGCGCTGGTCCTGCTGACCGTGTCTATTGGTTCCTG
ATGAAGAAGATGAAGCAGACATACTGTGGCGCTGACATCCCCCAATTCAC
TGAAGAAGATAAGCAGCGCACGCTCCAAAAGCATTGGAATGACCAGGTCA
CGCCAGATGTTCGCCTGTCTGATCTCTGCGAGCGTCAGTTGAGCACAACA
TATACACCCATTCCAGAGTTTGTCTACAAGAAGTGGCACCTGGGAAGAAT
TATTACCATTGGAGACGCCTGCCACAAGGTCCTCCCTATTACCGCGCAAG
GGGGCAATCAGGCTTTAGAAAGCGCCGCGGCTGTGGTAAATGGTTTGATG
ACAGCGTTATCGCAGGCTTCGGGCTCAGGCCCGCTCTCCCAGGCGGAGAT
TCAGTCGATGTTCGAGCGAGTGCAGGACATCCGCGAGCCGCGCACCTTTG
ATATTATCAAAACCACTCATCAACGACAGAAGTTGGATTCAATGGATACT
CCGGAGCTGAAAGAGTTTCTGCTTACTAAGTATGCAGGGCTGATGCCAGG
AGCATTGTGGAAACGATGGGCGGATACATTTACCCCGGCCGTGTCTTTGA
ATATGCTCGATCTGCCTGCTAGACCGAAGAGTGTTCCCTTTGACGATGAG
GCCCTGAGAAATGCAGGAAGCAATAATGCTCTAGCGGCACACCTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002658-T1.utr5p1 | KJC3_002658-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002658-T1.utr3p1 | KJC3_002658-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002938 |
| DBxref | InterPro:IPR036188 |
| DBxref | PFAM:PF01494 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3191500..3193208 + |
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