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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3193358..3196874+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002659-T1 ID=KJC3_002659-T1|Name=KJC3_002659-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3517bp|location=Sequence derived from alignment at ch2:3193358..3196874+ (Aspergillus niger KJC3)
ACTTCGTCGCTGCGAAAGACTACTTTAGATATCTGCATACCTAACAAGGG
CAGAGTATTATTTGGATCCAATTGACAGCCTGCAGTTTTACCCACAGCAT
GATCCCGAATCCTCCTTAATCTTCGGTCCGCTGGTCGCGTTGCGCAGTCA
GCCAGCTCGGCACTATCATCCACCCCTACCACCGTGGCCTCGCCTTCTTC
CCAACCCCCGCCGACGAATCCCTCGAGGCTCTTTCAGATAATGACACCAG
CGTTAATACCCAATTAGCGCTGCTATAGAATGGTTAATAGTCAGTGATAT
CAGTCATGGACGAACTACCCGGCCATCTCAATCAGCGAGCATCAGACACT
ATCGCCCATGTTGCCGCACCGGGCGGACAGGAAGCGCCAGTATCTCCCCG
GAAGAGAGAACATGCGAGCGGCATGGATCATGAGAGTCATAGCTTAGGGA
TTGAGAAGCTTCAGCAAAGCAGACCGATGGAATCGCGTCCTGCGGATAGC
GGGGACCGTGCCAACGGCACATTAAGCCGAAATATGCAACGTGGAGGATC
AGCAACATCGGATACTATGAGTACTCAGGAGCGGAGCAATAGGGAGGAAG
CTGTACACCGGTTTGGTGCGCTTGTCAGCGACCACGAACTAAATAGGTTC
CCCAGCCAACCCACAGTGAACGGCGACCAGAAAAGCGGTCAGCCTGCACT
TCCATCAGACCAGGCCCTAGGAATGGTCTTCGAACACTCGTTGGAGGGTG
CGGACAGTGCAGATCATCGTACGACACCAAGGACCTCCTTAGTGGATGTT
TTTGAAGGTTCCGACGTGGCTTCCGTCTTCCATCGCTGGTCGCGAAACAC
ATCACCTGTCAGGAACCAAGATAAGGAGCAGGAGCGGGTAGTGAAGCTAT
CTCCGGCCAGGATGCAGGAACTCGCATCATCCCCTCAGTCTATTCCTTAT
CGTGCAGCACCCCCGGAATCAGACCATGGTCGACGTGCAGTGTCAGATGG
CATGCATGCAGCGATCTCCCCATCGCAGCCTGACCAATCTGCAACTCTTC
TACCGAGCGAGCAGAAAGTAACCGGCGATAGCGTTCCCAAACTTCGTCCC
AACAAAGATCTTGCTATCGACGTCTCTGCTGCAACGGCAGCCAAGCAACC
TGTTCGGAGTCGGCCGCAAGGCTCTCGGGCTGTTTCTACTCCCAATTCGC
GACGGCAAACCATGCCGACGACTAGCGAACGACTGACGCAGACCTGGACG
TCTCGGGGGAAACAAGAGCGCGCTTCTCTCAGCCGAGAGTCAGATGGAAA
GCACCTTACCCCGTCGCCACACATCACTGGCACTGAGCCTGCTCTACCGT
CCCCTATGCCCCCAACCATTCCTCTCCCTCCGTTGTCTGTTCCGACATAC
CTACAATTAGAACTGGCCTCAGGTCGGCCGTCTCCACTATACATTCATCG
CTCTGCAATGAGCGATTTCCCATATGAATCTTCTCGAGTCAAGCTTGAAC
GCCTAATGAACTTTTTGATGTTGCCTCCCGCATTGGAACGGGTTCTCTGG
TTCGGTATATTAGCGTGTCTCGATTCCTGGTTGCATACGTTTACCATTCT
TCCTCTTCGTTTTGTCAAAGCATTGTACATTCTCTTGGAGTCTTGGGCTG
TCAATCTCGGCGTTGAGTTTCGTTATGTGACAGGATTCATTTTCAAAGGT
GTTGGGCGAGTGTGGCGGAGGCGACTCCGAGCATCATCGACGGACGAGTC
TTCGAAAATCGCTGACCCTGGGAGGTCCACCTCTGAGAAGCAGGAGAACG
GGTCAGTGGAACGAGAATCTCGCAATCGGGCCACAGAACCACGCAAGCGT
CATCATAAGCACCGGCGGCAGAAGAGCATCCCATCGGCTTTGATGCCAGA
TGACAAGGCTGACATCCTTAAAGGACTGCTCATTATAGCTACCTGCTGTG
TGTTAATGCGCTTCGATGCAAGTCGGATGTATCACTGGATCCGAGGACAG
GCTGCGATCAAACTTTATGTTATCTACAATGTGCTAGAGGTCAGCGATCG
GCTATTCGCTGCCATTGGACAAGACGTGCTTGAGTGTCTGTTTTCGCGCG
AAGCTCTCGAGCGTCGCCCGGACGGACGCAGCAAGGTCTTCCGACCATTC
GGACTGTTTTTGCTGGCATTGGCATACACAGTCATCCACGCAACGGCCCT
CTTTTATCAGGTGATGACCTTGAACGTCGCGGTGAATTCGTATTCGAACG
CGCTTATTACTCTGCTGCTCTCGAACCAGTTTGTCGAGATCAAGTCCACA
GTCTTCAAGAAATTCGAGAAGGAAAACTTGTTCCAACTTCTCTGCGCAGA
TGTGGTTGAACGCTTCCAGCTCTGGTTGATGCTTACCATCATCGCGTCGC
GTAACCTTGTCGAGACCGGAGCGTTCAACGCCCTTGGTAGCTTGAGTTTC
AGTCTTGGAGGATACACATCCACGGGGACAAACAGCACGCCCCTATCGAC
TCCTCCCCGGACCTCCTCATCCATCCTGCCACAGGCCTTTACCATTGTGC
CATCATCCATCATTGCGTCCTTTAGTCAAGTGAACACGTATTTGCCGACA
CTCGCACAGGTCTTAGGGCCGTTCCTGGTTGTTTTAGGGTCGGAAATGCT
AGTGGATTGGCTAAAACATGCCTATATTGGCAAATTCAACAACACACGAC
CAGCCATCTACGGGCGGTTCCTGGATATCCTGGCGAAAGACTACTACACC
AACGCCTTTGCAGACCAGAACCTGACCCGCCGTTTAGGTTTGCCGGTGAT
TCCACTATCTTGCCTCTTCTTCCGAGTCTCCGTCCAAACATACCAGATGT
TCATCACAGCCTTGCTTCCTCAACAGCCCTCCTCCACAGCGGTAGAGGCC
ACCACCCTATCCGCCATTCACAGCCAGTATGTGCCGGCTCCAATGCCCTC
ACCACCTCCATTGACGCTACGAAACTTCATCCCGACGTCAACCGCATACG
CGGGTGCCTTCTTCCGCCAGCTTCTAGCCAACACCATGCCGTCACCAGCC
CAATCAGTATACATCTTCACCATAGTCCTCATCTTAACGGGCTTCGTGGT
ACTCCTAATCCTGAAGCTTCTTCTGGGCATGGTCTTGCTAGCGTACGCAC
GGTCTCGGTACAAGGCGATGAAGCTGCGCGAATCATCCAGTCAAGCCAAT
GCCTCATCTGCAGCACCTGCTGATGAATCCAACGGGACAGGCCCCCGTGG
ACGAGCATTTGCAGTTGAGGGCAGCCGACGGTTCGGCGGATGGGGCGTGG
TCGAGGTTAACGATGATCATCGACGATGGATCTATGCGGATGACCCTGAG
GGACTGCGGCGGCTGAAGGCCAAAGAAGAGAAAGACAAGAATACCAAGGA
GGACCTGAACATGGATCATGTCCAACGATATGAGATGGTGGCCAAGAGGA
TCTGGTAGACGGTGAATATAGATATTTTTGTAATTAGCTTATGTACATCC
TAGGAGTAATAATTCTT back to topCoding sequence (CDS) from alignment at ch2:3193358..3196874+ >KJC3_002659-T1 ID=KJC3_002659-T1|Name=KJC3_002659-T1|organism=Aspergillus niger KJC3|type=CDS|length=3153bp|location=Sequence derived from alignment at ch2:3193358..3196874+ (Aspergillus niger KJC3)
ATGGACGAACTACCCGGCCATCTCAATCAGCGAGCATCAGACACTATCGC
CCATGTTGCCGCACCGGGCGGACAGGAAGCGCCAGTATCTCCCCGGAAGA
GAGAACATGCGAGCGGCATGGATCATGAGAGTCATAGCTTAGGGATTGAG
AAGCTTCAGCAAAGCAGACCGATGGAATCGCGTCCTGCGGATAGCGGGGA
CCGTGCCAACGGCACATTAAGCCGAAATATGCAACGTGGAGGATCAGCAA
CATCGGATACTATGAGTACTCAGGAGCGGAGCAATAGGGAGGAAGCTGTA
CACCGGTTTGGTGCGCTTGTCAGCGACCACGAACTAAATAGGTTCCCCAG
CCAACCCACAGTGAACGGCGACCAGAAAAGCGGTCAGCCTGCACTTCCAT
CAGACCAGGCCCTAGGAATGGTCTTCGAACACTCGTTGGAGGGTGCGGAC
AGTGCAGATCATCGTACGACACCAAGGACCTCCTTAGTGGATGTTTTTGA
AGGTTCCGACGTGGCTTCCGTCTTCCATCGCTGGTCGCGAAACACATCAC
CTGTCAGGAACCAAGATAAGGAGCAGGAGCGGGTAGTGAAGCTATCTCCG
GCCAGGATGCAGGAACTCGCATCATCCCCTCAGTCTATTCCTTATCGTGC
AGCACCCCCGGAATCAGACCATGGTCGACGTGCAGTGTCAGATGGCATGC
ATGCAGCGATCTCCCCATCGCAGCCTGACCAATCTGCAACTCTTCTACCG
AGCGAGCAGAAAGTAACCGGCGATAGCGTTCCCAAACTTCGTCCCAACAA
AGATCTTGCTATCGACGTCTCTGCTGCAACGGCAGCCAAGCAACCTGTTC
GGAGTCGGCCGCAAGGCTCTCGGGCTGTTTCTACTCCCAATTCGCGACGG
CAAACCATGCCGACGACTAGCGAACGACTGACGCAGACCTGGACGTCTCG
GGGGAAACAAGAGCGCGCTTCTCTCAGCCGAGAGTCAGATGGAAAGCACC
TTACCCCGTCGCCACACATCACTGGCACTGAGCCTGCTCTACCGTCCCCT
ATGCCCCCAACCATTCCTCTCCCTCCGTTGTCTGTTCCGACATACCTACA
ATTAGAACTGGCCTCAGGTCGGCCGTCTCCACTATACATTCATCGCTCTG
CAATGAGCGATTTCCCATATGAATCTTCTCGAGTCAAGCTTGAACGCCTA
ATGAACTTTTTGATGTTGCCTCCCGCATTGGAACGGGTTCTCTGGTTCGG
TATATTAGCGTGTCTCGATTCCTGGTTGCATACGTTTACCATTCTTCCTC
TTCGTTTTGTCAAAGCATTGTACATTCTCTTGGAGTCTTGGGCTGTCAAT
CTCGGCGTTGAGTTTCGTTATGTGACAGGATTCATTTTCAAAGGTGTTGG
GCGAGTGTGGCGGAGGCGACTCCGAGCATCATCGACGGACGAGTCTTCGA
AAATCGCTGACCCTGGGAGGTCCACCTCTGAGAAGCAGGAGAACGGGTCA
GTGGAACGAGAATCTCGCAATCGGGCCACAGAACCACGCAAGCGTCATCA
TAAGCACCGGCGGCAGAAGAGCATCCCATCGGCTTTGATGCCAGATGACA
AGGCTGACATCCTTAAAGGACTGCTCATTATAGCTACCTGCTGTGTGTTA
ATGCGCTTCGATGCAAGTCGGATGTATCACTGGATCCGAGGACAGGCTGC
GATCAAACTTTATGTTATCTACAATGTGCTAGAGGTCAGCGATCGGCTAT
TCGCTGCCATTGGACAAGACGTGCTTGAGTGTCTGTTTTCGCGCGAAGCT
CTCGAGCGTCGCCCGGACGGACGCAGCAAGGTCTTCCGACCATTCGGACT
GTTTTTGCTGGCATTGGCATACACAGTCATCCACGCAACGGCCCTCTTTT
ATCAGGTGATGACCTTGAACGTCGCGGTGAATTCGTATTCGAACGCGCTT
ATTACTCTGCTGCTCTCGAACCAGTTTGTCGAGATCAAGTCCACAGTCTT
CAAGAAATTCGAGAAGGAAAACTTGTTCCAACTTCTCTGCGCAGATGTGG
TTGAACGCTTCCAGCTCTGGTTGATGCTTACCATCATCGCGTCGCGTAAC
CTTGTCGAGACCGGAGCGTTCAACGCCCTTGGTAGCTTGAGTTTCAGTCT
TGGAGGATACACATCCACGGGGACAAACAGCACGCCCCTATCGACTCCTC
CCCGGACCTCCTCATCCATCCTGCCACAGGCCTTTACCATTGTGCCATCA
TCCATCATTGCGTCCTTTAGTCAAGTGAACACGTATTTGCCGACACTCGC
ACAGGTCTTAGGGCCGTTCCTGGTTGTTTTAGGGTCGGAAATGCTAGTGG
ATTGGCTAAAACATGCCTATATTGGCAAATTCAACAACACACGACCAGCC
ATCTACGGGCGGTTCCTGGATATCCTGGCGAAAGACTACTACACCAACGC
CTTTGCAGACCAGAACCTGACCCGCCGTTTAGGTTTGCCGGTGATTCCAC
TATCTTGCCTCTTCTTCCGAGTCTCCGTCCAAACATACCAGATGTTCATC
ACAGCCTTGCTTCCTCAACAGCCCTCCTCCACAGCGGTAGAGGCCACCAC
CCTATCCGCCATTCACAGCCAGTATGTGCCGGCTCCAATGCCCTCACCAC
CTCCATTGACGCTACGAAACTTCATCCCGACGTCAACCGCATACGCGGGT
GCCTTCTTCCGCCAGCTTCTAGCCAACACCATGCCGTCACCAGCCCAATC
AGTATACATCTTCACCATAGTCCTCATCTTAACGGGCTTCGTGGTACTCC
TAATCCTGAAGCTTCTTCTGGGCATGGTCTTGCTAGCGTACGCACGGTCT
CGGTACAAGGCGATGAAGCTGCGCGAATCATCCAGTCAAGCCAATGCCTC
ATCTGCAGCACCTGCTGATGAATCCAACGGGACAGGCCCCCGTGGACGAG
CATTTGCAGTTGAGGGCAGCCGACGGTTCGGCGGATGGGGCGTGGTCGAG
GTTAACGATGATCATCGACGATGGATCTATGCGGATGACCCTGAGGGACT
GCGGCGGCTGAAGGCCAAAGAAGAGAAAGACAAGAATACCAAGGAGGACC
TGAACATGGATCATGTCCAACGATATGAGATGGTGGCCAAGAGGATCTGG
TAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002659-T1.utr5p1 | KJC3_002659-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002659-T1.utr3p1 | KJC3_002659-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09263H0Y |
| DBxref | InterPro:IPR008010 |
| DBxref | PFAM:PF05346 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3193358..3196874 + |
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