You are here

Home

KJC3_002660-T2, KJC3_002660-T2 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002660-T2
Unique NameKJC3_002660-T2
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3197226..3199720-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002660-T2 ID=KJC3_002660-T2|Name=KJC3_002660-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2495bp|location=Sequence derived from alignment at ch2:3197226..3199720- (Aspergillus niger KJC3)
CTCAGCGCCTTCGCTGGCCTGCCTTGCAGCTCAACGAGAAGACTAAGATT
TCTGGTCTTACTAACCTCCTGTACACAATGCAGCGCACTAATTTGACATC
ATGCATCCTTAGTATCAGGTGGAGCCTCGCGCCCACCACTTCCGGGGTCG
ACATGACCCTCGCGGATGGTTGGCCTGCTCCTCCTCCTTTACTAGCCATC
CAGGTCTCAATATTGGTCCAATGATGCGCTTCTGGTCTGACCTATACTCA
CCGGGGTTGTGGAGGGCTGGTCTGGTCTTGCTTCCCTCGGTGGAGAAGCG
ATCTGGGGGGGTTCGCGTCCTGCCGTCATTTCCGGCTGGAGGGAGTAAGG
ACAACCGAAGTCTGAGCCTGACTCTGGAATTATTTATCAGGAGCGTGCTT
GCCCATCTTGACTTTCTCTGTTGTTGCTATTGTTATTGTCAATCTCATCA
ATCTATCAGTGTTTTCAATGAACTCCCGTACCTGAGTGGCGAACCCTCAT
TTATCCACGGATATTGTACGGCCCAAATTTGCCCTTAGCCTAGGACCTCC
GAATTTTTCCCCAAATTTTTAAATCTTTATTTTTTCTTATAACTCCGGCC
CTCTCTTTCGCTTCCTTTATCATTTTGATTTCCATTTCCTTGTAATCCAA
CCTCTTTGTCAGAACCTTTGGATTCATTCGCGATTATGGAGCAAGCAAAG
ACTCCTCTGCAGGTGATTGTGGTTGGGTAAGATCAAACCATCCTGTCATC
TGAGACTATGTATTGTTACTGACGTTACCATATAGTGCCGGTAGGACAAC
TGTCTCATAGACTTGATAGCGAATGAAGCATGTAACTAATGAAATCAGGC
ATTGGCGGCATGGCTGCGGCCCTGACCCTGGGTCTGCGAGGACATCATGT
TACCATCCTCGAGTCCGCTCCCAAGGTGCGTATACCACTCCATGCTATGA
TACATAGTGCTGACTGACCTCTCGTAGCTCATGGAAGTTGGTGCTGGTAT
TCAAGTCTCACCGAATATGCTGACACTGTTTGACCGTAAGCGCCCCTTAC
TTCTCCTGTTACTCAACCCCATCTGATGATATGACTCAGGGTGGGGCGTC
TCCCCGTTGATCCACGCCCAGGATGTTGCCCTCGAGCACATTCATGTAAG
ACGGTGGGAGGATGGCAGCATGCTTGGCACCTTGCCAGTGAACAAGACCT
ACGGCCAACAGACTGTCATTCACCGCGCAGACCTCCACAACGCCCTCATC
GAAAAGGCGCTGGCGCTGTCGAATGTGGAGCTGCGCGTGAACTCGACCGT
CACTGGAGTTCAATTCGACCATGCCGCGGTGCAATTGGCCAACGGCACTA
TTGTTAAAGGAGACATCGTGATCGCGGCTGACGGCATCAAGTCTGCCCTC
CGTGATCACTTGCTGGAAGAAGCATCTGTCGCCATTCCTACGGGCGACGC
AGCCTACCGGATTATGCTGCCTCGTAGTGCTCTAGAGAATGACCCTGAGC
TAAAGGCACTGGTAGATGAGCCACAAGCCACTCGGTGGCTCGGACCTGGC
CGTCATGTCATCGCTTATCCAGTGCGCAACCATGATTTGTACAATGTTGT
CCTGCTTCATCCAGACAGCCATGGTGTCGAGGAGTCGTGGACGACCAAGG
GTTCCAAGCAGGCCATGGTCGACAACTACAAGGGCTGGGACCGGCGTGTG
ACGAAGCTTATCGACCTGGTACCGGACGATGAAGTCCTGGAATGGAAGCT
GTGCCTTCACGCTCCGCTGAAGACCTGGATTAGGGGTTCCGTGGCCCTCA
TCGGTGACGCCTGCCACCCAATGCTGTAAGCACCCTTCATTTTAGACATT
CTGGCTAGCACTAACGTCTTCTAGGCCATATGTTGCTCAAGGTGCTGCCC
AGGCCGTCGAAGACGCTGCTGCCCTCGGTGTCCTGCTCTCCACTATCTCT
TCCCGGGATGAAATCCCTCTTGCACTCAAAGCGTACGAGAAGTCCCGCAA
GCCTCGCGCAGACACCGTCCAGCAATCTGGGTCGGAGAACCGCATCACGC
TCCACCTGCCCGATGGCCCGGAGCAACGCGCGCGTGACGAACAGTTCCGT
TCTTCCCTGAAGAGCGGATCAAACCCCGACCGGTGGACAGACCTGGAAAC
CCAGAAGTTCCTCTGGGGCTGGGATGCTGAGAAGGCAGCTCTGGATGCAT
GGAATGGTAAGTTGCCATCGCCATTCACCTACCTATGGCAAGATATGCTA
ACAAAAACCAGAACTCCATGGCAACCACGTGTCCGAACTGCGGCACCACC
TGTGATCTGTGATTTGCAATAATATCACATGCACATAAGAAATACGTTCC
TTCTTCAACATGATTGGGATTGATTAACACTTTTAGCCCTGGCGTTCTCA
TCAACGTTTCATTAGCGATTATCATATACTTTTATGAATCACTGTACATA
CTTACCATCAGGCATATAGAATGCACATATGAACCTCTTTCTCTG
back to top

Coding sequence (CDS) from alignment at ch2:3197226..3199720-

>KJC3_002660-T2 ID=KJC3_002660-T2|Name=KJC3_002660-T2|organism=Aspergillus niger KJC3|type=CDS|length=3096bp|location=Sequence derived from alignment at ch2:3197226..3199720- (Aspergillus niger KJC3)
AACTCCATGGCAACCACGTGTCCGAACTGCGGCACCACCTGTGAGCCATA
TGTTGCTCAAGGTGCTGCCCAGGCCGTCGAAGACGCTGCTGCCCTCGGTG
TCCTGCTCTCCACTATCTCTTCCCGGGATGAAATCCCTCTTGCACTCAAA
GCGTACGAGAAGTCCCGCAAGCCTCGCGCAGACACCGTCCAGCAATCTGG
GTCGGAGAACCGCATCACGCTCCACCTGCCCGATGGCCCGGAGCAACGCG
CGCGTGACGAACAGTTCCGTTCTTCCCTGAAGAGCGGATCAAACCCCGAC
CGGTGGACAGACCTGGAAACCCAGAAGTTCCTCTGGGGCTGGGATGCTGA
GAAGGCAGCTCTGGATGCATGGAATGATGCTTGGCACCTTGCCAGTGAAC
AAGACCTACGGCCAACAGACTGTCATTCACCGCGCAGACCTCCACAACGC
CCTCATCGAAAAGGCGCTGGCGCTGTCGAATGTGGAGCTGCGCGTGAACT
CGACCGTCACTGGAGTTCAATTCGACCATGCCGCGGTGCAATTGGCCAAC
GGCACTATTGTTAAAGGAGACATCGTGATCGCGGCTGACGGCATCAAGTC
TGCCCTCCGTGATCACTTGCTGGAAGAAGCATCTGTCGCCATTCCTACGG
GCGACGCAGCCTACCGGATTATGCTGCCTCGTAGTGCTCTAGAGAATGAC
CCTGAGCTAAAGGCACTGGTAGATGAGCCACAAGCCACTCGGTGGCTCGG
ACCTGGCCGTCATGTCATCGCTTATCCAGTGCGCAACCATGATTTGTACA
ATGTTGTCCTGCTTCATCCAGACAGCCATGGTGTCGAGGAGTCGTGGACG
ACCAAGGGTTCCAAGCAGGCCATGGTCGACAACTACAAGGGCTGGGACCG
GCGTGTGACGAAGCTTATCGACCTGGTACCGGACGATGAAGTCCTGGAAT
GGAAGCTGTGCCTTCACGCTCCGCTGAAGACCTGGATTAGGGGTTCCGTG
GCCCTCATCGGTGACGCCTGCCACCCAATGCTAACTCCATGGCAACCACG
TGTCCGAACTGCGGCACCACCTGTGAGCCATATGTTGCTCAAGGTGCTGC
CCAGGCCGTCGAAGACGCTGCTGCCCTCGGTGTCCTGCTCTCCACTATCT
CTTCCCGGGATGAAATCCCTCTTGCACTCAAAGCGTACGAGAAGTCCCGC
AAGCCTCGCGCAGACACCGTCCAGCAATCTGGGTCGGAGAACCGCATCAC
GCTCCACCTGCCCGATGGCCCGGAGCAACGCGCGCGTGACGAACAGTTCC
GTTCTTCCCTGAAGAGCGGATCAAACCCCGACCGGTGGACAGACCTGGAA
ACCCAGAAGTTCCTCTGGGGCTGGGATGCTGAGAAGGCAGCTCTGGATGC
ATGGAATGATGCTTGGCACCTTGCCAGTGAACAAGACCTACGGCCAACAG
ACTGTCATTCACCGCGCAGACCTCCACAACGCCCTCATCGAAAAGGCGCT
GGCGCTGTCGAATGTGGAGCTGCGCGTGAACTCGACCGTCACTGGAGTTC
AATTCGACCATGCCGCGGTGCAATTGGCCAACGGCACTATTGTTAAAGGA
GACATCGTGATCGCGGCTGACGGCATCAAGTCTGCCCTCCGTGATCACTT
GCTGGAAGAAGCATCTGTCGCCATTCCTACGGGCGACGCAGCCTACCGGA
TTATGCTGCCTCGTAGTGCTCTAGAGAATGACCCTGAGCTAAAGGCACTG
GTAGATGAGCCACAAGCCACTCGGTGGCTCGGACCTGGCCGTCATGTCAT
CGCTTATCCAGTGCGCAACCATGATTTGTACAATGTTGTCCTGCTTCATC
CAGACAGCCATGGTGTCGAGGAGTCGTGGACGACCAAGGGTTCCAAGCAG
GCCATGGTCGACAACTACAAGGGCTGGGACCGGCGTGTGACGAAGCTTAT
CGACCTGGTACCGGACGATGAAGTCCTGGAATGGAAGCTGTGCCTTCACG
CTCCGCTGAAGACCTGGATTAGGGGTTCCGTGGCCCTCATCGGTGACGCC
TGCCACCCAATGCTAACTCCATGGCAACCACGTGTCCGAACTGCGGCACC
ACCTGTGAGCCATATGTTGCTCAAGGTGCTGCCCAGGCCGTCGAAGACGC
TGCTGCCCTCGGTGTCCTGCTCTCCACTATCTCTTCCCGGGATGAAATCC
CTCTTGCACTCAAAGCGTACGAGAAGTCCCGCAAGCCTCGCGCAGACACC
GTCCAGCAATCTGGGTCGGAGAACCGCATCACGCTCCACCTGCCCGATGG
CCCGGAGCAACGCGCGCGTGACGAACAGTTCCGTTCTTCCCTGAAGAGCG
GATCAAACCCCGACCGGTGGACAGACCTGGAAACCCAGAAGTTCCTCTGG
GGCTGGGATGCTGAGAAGGCAGCTCTGGATGCATGGAATGATGCTTGGCA
CCTTGCCAGTGAACAAGACCTACGGCCAACAGACTGTCATTCACCGCGCA
GACCTCCACAACGCCCTCATCGAAAAGGCGCTGGCGCTGTCGAATGTGGA
GCTGCGCGTGAACTCGACCGTCACTGGAGTTCAATTCGACCATGCCGCGG
TGCAATTGGCCAACGGCACTATTGTTAAAGGAGACATCGTGATCGCGGCT
GACGGCATCAAGTCTGCCCTCCGTGATCACTTGCTGGAAGAAGCATCTGT
CGCCATTCCTACGGGCGACGCAGCCTACCGGATTATGCTGCCTCGTAGTG
CTCTAGAGAATGACCCTGAGCTAAAGGCACTGGTAGATGAGCCACAAGCC
ACTCGGTGGCTCGGACCTGGCCGTCATGTCATCGCTTATCCAGTGCGCAA
CCATGATTTGTACAATGTTGTCCTGCTTCATCCAGACAGCCATGGTGTCG
AGGAGTCGTGGACGACCAAGGGTTCCAAGCAGGCCATGGTCGACAACTAC
AAGGGCTGGGACCGGCGTGTGACGAAGCTTATCGACCTGGTACCGGACGA
TGAAGTCCTGGAATGGAAGCTGTGCCTTCACGCTCCGCTGAAGACCTGGA
TTAGGGGTTCCGTGGCCCTCATCGGTGACGCCTGCCACCCAATGCT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0071949FAD binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002660KJC3_002660Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002660-T2KJC3_002660-T2-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002660-T2.cdsKJC3_002660-T2.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002660-T2.utr3p1KJC3_002660-T2.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002660-T2.exon3KJC3_002660-T2.exon3Aspergillus niger KJC3exon
KJC3_002660-T2.exon2KJC3_002660-T2.exon2Aspergillus niger KJC3exon
KJC3_002660-T2.exon1KJC3_002660-T2.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002660-T2.utr5p1KJC3_002660-T2.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036188
DBxrefInterPro:IPR002938
DBxrefPFAM:PF01494
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3197226..3199720 -
Powered by Drupal