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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3202284..3205293- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002661-T1 ID=KJC3_002661-T1|Name=KJC3_002661-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3010bp|location=Sequence derived from alignment at ch2:3202284..3205293- (Aspergillus niger KJC3)
GTCAGTAGTAGTAGCGATAGTTCCACTCCGGACTAAGTAGATACGGGTAC
CTCCCCTGTCCCTCCCACGTCCCTCTCAGTCATGCTTTGGTCAAATTCTT
TCAGGAGATGCAGCGATGATCCATGCTCTTTTCCTCCCTTAAGGCTGAGA
GGGTCTTCAGGCATCCAACTAGGACTTGTGCTGCCGTCTCCCTGCATCCT
TCGTCAGGTACACCCAAGGCACCTCCCAAGAAGTCGTTCAAACTTCCGGT
CCTCCCACGTCAGTACCCAAGCGCCTCCCCCGCCAATGGAGCATCCCCTC
CGTTGGATCGTGCGGTGACAGCAACACAGTCCCCACGGATCCGTGCAGCC
ATTCAGATCTAAGAAATCCATCTTTTTGGCGCATTTTGTTGCCTTGTTCC
CAGCTTCATCGACACCCAACCGGTTTGCATTGGCAAGGCGGATACTTCCC
CCCTGTTCGTTGCTTTATGCCCATCTTAGGCGCCGGGGCCGGTCCTGCGT
CCTTTTAGACCCCCCAGCCCCCTCATATTTCTGTTCCTTGTACCTTCTCT
GTACTCTATTTCGCTGCCCTTACCTGTCAGCGTGGAAATCTCCTCTGTGG
CGTGGTCATCCGCCTGCATGCTAGCTACTAGTTACTGTTGGTTGCATCGT
ACCGGACCTTTCCGCAGCTTATCGTGATTCCTCTTCATATAATTCCGAAA
AACCACCACAGCTGAACGGTGAACCTTGACACCAGGCACCACTTTTAAAA
TTCGCCATCAGCGCAGTTATATATCTGCGATATCCAGGTCCCTGCTTTCT
CAATAATTTGTGTCGTCATTAAGGCCTGGACCACGATCTCTGGTCTGGAA
AACTTTGAGATCGGGCCAAATCTCCACCGCGACTCGACTAGTGTCGATAT
TATTCCATTTTTATACACTTTCGCCTGGTTGCGCTACACCGCTGGTCTTA
CGCTCGGGATCTTGTGGAACGCCAACCCATCATTTTATCGATGCTTGATC
CTATTTGAATGTCCACTGGGCAACATTTCACAAGCAAGAACGGAGTCAAT
TGACATCGTTCACTCTGATCAAGTGATAGAATAAGAAGCACACATTTATA
CACAGTCATCATGGCTCCTCTGGGCGAAACGATCGCTGTGATTGACAAGT
CCGGTAAGGTGGTGAGCACGGTACGTATACGATCATACTTCCCCGTACAC
TGACATGCGATACTGACATATGACGGATCATAGAGCAAGCACCTGTTCGG
CGTGTTCAGTCAAGCCAAGAATGCCTATCGCGAGCGCAAAGCTCAATTTC
AGTCTGAACGGAACGCCAAGATTGCCGAGAAGGAGGCACTGAGGGCTCTT
GAGAACTACCATATCGATGATGCGCCTTCAGTCGCATCCTCTCGAAGGAG
CCGTTCCCGACACCATTCAGGCCGCAGCCACTACGCTCGTGAACCTTCGG
TCTATGAAGAAAATGTGCAATGGCAGGACCCTTATGCCGATCCTTATGGT
GTTCGACCAGGGGAAATGGTCCGCCGTCATACCCATGACGTCGCCATGCG
TGGTCCAGAGCGACCAACCACCAGCCGCTCCAAGTCCGATGCTCATGTCG
ACATGGACCTAGCATACGGCGACTTCCACCCTTCGGCCCTAGAGACAGTA
CCACCACCTCCCGAACCACAAAACCAGCTCCAAAGAATTGAGAATCCGGA
ACTAAATACTCTTGTGGATCGGGCGCAGTGGCTCCTAGAGGAAGCTGACT
GCATGCAACATACTGCGACCGCCACTATTGCACATCTTCAGAAGAATCCA
GATGCCATGGCTGCTGTAGCTCTCACCTTGGCCGAGATCAGCAACATAGC
CACAAAGATGGCCCCATCTGCGCTTTCAACCCTCAAGGCTGCGGCCCCAA
CAGTCTTCGCCCTGCTTGCAAGCCCACAATTCTTGATCGCAGCGGGTGTT
GGTATCGGAGTCACGATTGTCATGTTTGGTGGCTACAAGATTGTCAAGCA
GATCCAGAACGCCACCACCGCTACTCCCAGCAGCCCTATGAGGGCAGCGG
CAGCTCCCGAGGAAGATCCTGGCATGGATGACATGATGGAGTTTAACACC
GAATGTCTAAGCACTGTCGAAATGTGGCGGCGCGGCGTAGCGGACGCCGA
GGCCGACAGCGTTGGCACGTCCGTCGATGGAGAGTTCATCACACCTAAAG
CAGCAGCAATGTCAGGCATTGATGTGACTACGGCACGAATGTCGCGGGAC
CCGCGATTCAAGTTCGACGACGATGATCAGTCGATGGCATCATCTCGCAG
ATCTCGTCGGTCGCGCAGCCATCGTGAAGGATCTCGTGCCAACCACCGAC
CAGAGTCGCACGTCAGCTCGAGGGCACCTTCCAAAGTTTTCTCGAAAGCG
CCATCGAAGGCACCGTCCAGAGCGCCCTCATACGCACCTTCCAGAGCCGA
ATCGCGTTACTCGGACATGGAACCTAAGCCGAAGGAGAAGAAGAAGCGAT
CCAGCCGTTTGCGTTTGATGTTCACTGCTTGATTTCTACACCTCTATATT
TTTTAAACGACAGATCGACACTTTACGACATGTATATAATATTGTATACT
GCGATTCCGGATAACATTACGACAGGATGGATATTTGCTTGGCGCAATTA
GAATTAGCGAAGTTTCTTCATTCTTTGACTTATGATCGGTGGTGATTTGT
GTCTTTCTCCTGACTATCATTTGACATGATACAGTTGCACATTTGGCGTT
TGATACCACTCCTTATGCATGTAGAATGCCTCTGATGTTGATATTCTTTT
TATCAAGATGCATATACTCGGACTGTGACAGTCTACCATGGAACACTTGA
CATAAGTGAAAAGTTCATACTGAAAATGGAAGTTCATACTATACATAGTG
AATTTGTATTCATCTTGAGTGTCTGTTTGAGTTTATGTTTTCCAGTACTC
AGTATTTACCGCGATTCCCAGAACAGGCCCATCCTAGCCCATCGATAGGA
CACAACAATG back to topCoding sequence (CDS) from alignment at ch2:3202284..3205293- >KJC3_002661-T1 ID=KJC3_002661-T1|Name=KJC3_002661-T1|organism=Aspergillus niger KJC3|type=CDS|length=2718bp|location=Sequence derived from alignment at ch2:3202284..3205293- (Aspergillus niger KJC3)
AGCAAGCACCTGTTCGGCGTGTTCAGTCAAGCCAAGAATGCCTATCGCGA
GCGCAAAGCTCAATTTCAGTCTGAACGGAACGCCAAGATTGCCGAGAAGG
AGGCACTGAGGGCTCTTGAGAACTACCATATCGATGATGCGCCTTCAGTC
GCATCCTCTCGAAGGAGCCGTTCCCGACACCATTCAGGCCGCAGCCACTA
CGCTCGTGAACCTTCGGTCTATGAAGAAAATGTGCAATGGCAGGACCCTT
ATGCCGATCCTTATGGTGTTCGACCAGGGGAAATGGTCCGCCGTCATACC
CATGACGTCGCCATGCGTGGTCCAGAGCGACCAACCACCAGCCGCTCCAA
GTCCGATGCTCATGTCGACATGGACCTAGCATACGGCGACTTCCACCCTT
CGGCCCTAGAGACAGTACCACCACCTCCCGAACCACAAAACCAGCTCCAA
AGAATTGAGAATCCGGAACTAAATACTCTTGTGGATCGGGCGCAGTGGCT
CCTAGAGGAAGCTGACTGCATGCAACATACTGCGACCGCCACTATTGCAC
ATCTTCAGAAGAATCCAGATGCCATGGCTGCTGTAGCTCTCACCTTGGCC
GAGATCAGCAACATAGCCACAAAGATGGCCCCATCTGCGCTTTCAACCCT
CAAGGCTGCGGCCCCAACAGTCTTCGCCCTGCTTGCAAGCCCACAATTCT
TGATCGCAGCGGGTGTTGGTATCGGAGTCACGATTGTCATGTTTGGTGGC
TACAAGATTGTCAAGCAGATCCAGAACGCCACCACCGCTACTCCCAGCAG
CCCTATGAGGGCAGCGGCAGCTCCCGAGGAAGATCCTGGCATGGATGACA
TGATGGAGTTTAACACCGAATGTCTAAGCACTGTCGAAATGTGGCGGCGC
GGCGTAGCGGACGCCGAGGCCGACAGCGTTGGCACGTCCGTCGATGGAGA
GTTCATCACACCTAAAGCAGCAGCAATGTCAGGCATTGATGTGACTACGG
CACGAATGTCGCGGGACCCGCGATTCAAGTTCGACGACGATGATCAGTCG
ATGGCATCATCTCGCAGATCTCGTCGGTCGCGCAGCCATCGTGAAGGATC
TCGTGCCAACCACCGACCAGAGTCGCACGTCAGCTCGAGGGCACCTTCCA
AAGTTTTCTCGAAAGCGCCATCGAAGGCACCGTCCAGAGCGCCCTCATAC
GCACCTTCCAGAGCCGAATCGCGTTACTCGGACATGGAACCTAAGCCGAA
GGAGAAGAAGAAGCGATCCAGCCGTTTGCGTTTGATGTTCACTGCTTGAA
TGGCTCCTCTGGGCGAAACGATCGCTGTGATTGACAAGTCCGGTAAGGTG
GTGAGCACGAGCAAGCACCTGTTCGGCGTGTTCAGTCAAGCCAAGAATGC
CTATCGCGAGCGCAAAGCTCAATTTCAGTCTGAACGGAACGCCAAGATTG
CCGAGAAGGAGGCACTGAGGGCTCTTGAGAACTACCATATCGATGATGCG
CCTTCAGTCGCATCCTCTCGAAGGAGCCGTTCCCGACACCATTCAGGCCG
CAGCCACTACGCTCGTGAACCTTCGGTCTATGAAGAAAATGTGCAATGGC
AGGACCCTTATGCCGATCCTTATGGTGTTCGACCAGGGGAAATGGTCCGC
CGTCATACCCATGACGTCGCCATGCGTGGTCCAGAGCGACCAACCACCAG
CCGCTCCAAGTCCGATGCTCATGTCGACATGGACCTAGCATACGGCGACT
TCCACCCTTCGGCCCTAGAGACAGTACCACCACCTCCCGAACCACAAAAC
CAGCTCCAAAGAATTGAGAATCCGGAACTAAATACTCTTGTGGATCGGGC
GCAGTGGCTCCTAGAGGAAGCTGACTGCATGCAACATACTGCGACCGCCA
CTATTGCACATCTTCAGAAGAATCCAGATGCCATGGCTGCTGTAGCTCTC
ACCTTGGCCGAGATCAGCAACATAGCCACAAAGATGGCCCCATCTGCGCT
TTCAACCCTCAAGGCTGCGGCCCCAACAGTCTTCGCCCTGCTTGCAAGCC
CACAATTCTTGATCGCAGCGGGTGTTGGTATCGGAGTCACGATTGTCATG
TTTGGTGGCTACAAGATTGTCAAGCAGATCCAGAACGCCACCACCGCTAC
TCCCAGCAGCCCTATGAGGGCAGCGGCAGCTCCCGAGGAAGATCCTGGCA
TGGATGACATGATGGAGTTTAACACCGAATGTCTAAGCACTGTCGAAATG
TGGCGGCGCGGCGTAGCGGACGCCGAGGCCGACAGCGTTGGCACGTCCGT
CGATGGAGAGTTCATCACACCTAAAGCAGCAGCAATGTCAGGCATTGATG
TGACTACGGCACGAATGTCGCGGGACCCGCGATTCAAGTTCGACGACGAT
GATCAGTCGATGGCATCATCTCGCAGATCTCGTCGGTCGCGCAGCCATCG
TGAAGGATCTCGTGCCAACCACCGACCAGAGTCGCACGTCAGCTCGAGGG
CACCTTCCAAAGTTTTCTCGAAAGCGCCATCGAAGGCACCGTCCAGAGCG
CCCTCATACGCACCTTCCAGAGCCGAATCGCGTTACTCGGACATGGAACC
TAAGCCGAAGGAGAAGAAGAAGCGATCCAGCCGTTTGCGTTTGATGTTCA
CTGCTTGAATGGCTCCTCTGGGCGAAACGATCGCTGTGATTGACAAGTCC
GGTAAGGTGGTGAGCACG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002661-T1.utr3p1 | KJC3_002661-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002661-T1.utr5p1 | KJC3_002661-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch2 | supercontig | ch2:3202284..3205293 - |
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