|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3243934..3247893- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002676-T2 ID=KJC3_002676-T2|Name=KJC3_002676-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3960bp|location=Sequence derived from alignment at ch2:3243934..3247893- (Aspergillus niger KJC3)
CTTGATAAAATAAAAGTCTTGGTATCTGCTCATAGAAGTCATTGATTGTG
TCTCTCTACTCTATCTCTGTCTGTCACTGCAATATTAGCCAACCCACCCC
ACTTTGTGTGACCAACTCCCACGAGGGAAAACAGAAACAGAATAATCAAA
TCACACACTTATCGTGTGATTATTACGGGTCGCGATAACGAGTGGGAGGA
TCACTACTATCGAATTGATCTAGCGGGAAAAGCACACCGTGACAGTTCAC
CCCTCCAGCCTTGTTTCCCTTACGAAAGGGAACCCCCGTGGCATCTGGTT
CCTGCGCCCGCGGCCTTTTCTCCGGTATGTTGGTGATGTAACGTATTCAG
GCTGAACATTTGCATTCGCCTCTCTCCATTGCTCTTGCTTTCTCATTCTC
TCGCCATCACTCCGGCTCACCTTCTTGATTCACTTTGTTGTTACTGTCCT
CTGAGCCCTTGTAAAAAAGCATCTTCCCTCCCACCCCCACATTCACACTC
AAAAACATTCAGTTTGGCTCAAAAGCCCAGCTGCCATCCATCCATCCATC
CCCTTTCGGCCTACTTCCCGCTTCTTAAATTCTCACTGTCTGCGCTGCCG
ATACCGATACTACCCGTTCACTACCTTTGAACTCCTCCCATACTAACTTG
TTGTCTTCTTTTCTCCAAAAGTGCTGTCACATCATCGAGTCATCGTTCTA
TCTTTAGAGCATCAGGTTATCTCATCAGCCTGGCTTAGTCAACACACCGC
TGGTAAATCGCATCATCCTCGGGACACTTAACCCAAAATTTTCCCTACCC
AAGGACCGCCTTGCCACTCCCGGGGCCAAAAAGGCCTCTCCGAAAAAGAC
CCAAAGACGCAAGTGACGGAAACGGCTGCTTTGGAGTCTCCACTCACCAA
CTTCCTTGCTCATAGTGGGACCCGTTGTCGACCCGGTCTTGCCTGCAAAT
CTGGACAGTCCTAAGCAGATCAGTGGCAGGCTTTATTCCCTTTCGCGCCA
TAGTTCCGTCGCATTGTCGTGGTTCCTTGGACACCTTCTTTTTAAAATTT
TCTTTTTCCATTTTTTTTCAATTTTTTTTACGTTTCTCCTTTTTTAGTTT
GATTAAATACATCAACCTCCCGCCCACCCACTCCTCCCTTTCACATTCCA
ACCATAATCACGCCCATATATCTTCTTGGCTCCCCCCCATTCTACTAGCA
GCTGCACACGAGCAGCTGTTGGTTGACACAATAACGTCATGGCTTTGAGT
TTCTTTGGTGGCGGAGGCAGCTCCAGTCACGCGAAATACTTCGATATCCG
GTGAGTCACGCCATTCTCGCACTTACTCCGGCACGCCGGCTTCCTTACCC
GAGTGCGCTGGCTAACCACCCTGTTGTCGCATAACAGTCTTGATGAAGAT
TATATTGTATTTCGCGGAGGCGAGGAAGAAGCGGCCAGTGCCCATTTGAG
CGGAAAGCTCATTCTTTGTCTGTCGGAGCCCTTGTCCATCAAGCACATCA
GACTCCACCTTACGGGTATTTCTCGGGTTTGGTAAGTGCTGTCGGCAACC
CCCCGATGCGACAAGAATTGAAACTGATTGAGTTTGATCAGCTGGCATTT
GCCGTCTAGTACTGCTGGAGGTGGTAGAAAGTCATGGAGAGAACGCGTGT
TCTACGAAAAGACCTGGAGGTTCAGAGATGCGGGCAAGAGCAAGACGGAG
GTTCTGCCAGCGGGCAACTACGAGTATCCCATCAACCTTGTTCTCGAGGG
ATCCATGCCGGAGAGCGTTGAAGGCCTTAACGACACCTACGTGACCTATC
GCTTCAAGGCGGAAATCGGACGCAAATATGCCAAGGACATTGTTGTTCGT
CGGCCGCTCCGTATCATTCGGACTCTGGAGCCTAGTGCTCTTGAGCTTGC
ACACGCAATGGTGCGCTCCCACATATATACTATACTTTTGGCGCATGTTT
TACTAACAATTCTTGGTAGTCTGTGGAAAATGTCTGGCCAAACAAGATAG
AATACTCGATCAGTACACCGACGAAGGCCGTGGTTTTCGGAACCAGCATC
CGTGTGGACTTCAAGCTGATCCCTCTCCTGAAGGGACTCAGAATTGGACA
GATTGTCTCTCAGCTCATTGAAAGCCACGACCTTACCCTCAACCCCGAAG
ACCCTGATTCCGTCCGCAACACATACAAGAGTACGAGAACCATTTTGAAC
GATGAGCATGAGCTGGATGAGGATAGCGGCCTGGAAATTATCGATGAAAT
GGCAGAGGGATACCAGTTTTCGCGTCATCTGGAACTGCCCAAGACTTTGA
CTCGGTGCCTGCAGGACACTGACACCAGGGGCATCAAAATTCGTCACAAG
CTCAAGTTTCGCGTTCAGCTCTTGAACCCTGATGGACATGTCAGCGAGGT
ATGCAAACTCATCACTTGGTATTGGTACTGAGAAGTTTATTCTGACCTTG
TCGCAGCTTCGCGCCACCCTTCCCGTCTCGATCTTTATCTCTCCTAGCCT
AGCCATCGATGAGAACAACAACCTTGTCGACCAAACCCCTCATTCTGCTC
AAAGAGCGATCGATGATCTCGCTCAGCAGGCTCCTCCCTTGTACGGCGAG
CATCAATTCGACCAACTGTACAGCGAACTTGATCCTTCGGGATACCGTAC
CCCTGGCCCTGGAAGTGGTCCTGGTACTCCGTTCGGCACCCTCAGCCGTA
ATCTGTCGGCGGAGAACCTTGCTTCGATGAATGCGTTGACCAACACCGAC
ATCTCCGCTTCTGCCTTGCACACCCGTCTATCGATCTTGCGCGCCAATGG
ACATGATCAACCTTCCCCTACCGACCAAGAGCATCCGGACAACGATAGCC
GTCGCCTAGGCGTTCCTCCCGATTACTTCGGAGCGGGATCCGGTTCCAAC
TCGCACAGTCCCGCTAGCCCCGAGCTCTCTCGCCGTGCCTCCGATGAGGT
CGATCACGACTACATTCACTCCGGAATGGCGACTCCCTACCATCCTCAGT
ATGCCGAGGTCGAGACCCTGAGCCGTGTGCCGAGTTACTCCACCGCCGTC
CGCACTACTGTCCGCCCTTGCGACTCCGAACTGCCTGATTACCAAGCCGT
CATAGCCGAGGATGTTGTCATCTCAGCGCCCCAGTCGCCTCAGCAGGCTC
ATGTCCGCACCGCCGGCCGCGGGTCTTCATATTTCTCCGCCATCGATGCG
CTTCACAGTCGGTCTGGTCTCCTCCACTCCACCTCCAGTCACGACGATGA
TGAACGTCGACTGCGTCTTGTCCAAGCTCGAGCCAGGGTCTAATTAGGTT
GCAGATTCCATTAACAGTAATAGTCGATCAAGTTTCTTGAAAGAGAAAGT
GTCGGCAAGAGTTGGAGTTGTTCTGCTATGTCGGGCCACTCGGTGGTCGG
GTCAAGGCGAGACTGGCTCCGCCTGATCGGCCTGTCGGATAGAGCACCAC
CTCGCACATATTCATCGGTCCTCGGATGCTGGCTGTCTGGGGACATTGCG
TTTCAGATCTCGGCCTACCCTTTAGAGCATCAACAGCGTGTACTGCCGTT
CCCCGTGACAGTGTGTTTCTGAACAAAACACGGAGGGTCTCAATGCGCCT
CTTGAATGATTCTAGTTGCATACATACTTAGACTCGTTGGGTGGGGATTT
TATTTTACCGGCGTTTGCAACTAATAGACGGAATGGGTTGACTGGAAGGA
CAAGGAGTCCGGGTTTTTCTTCTTCATTTTCTACCCTGATCATTATCCAT
GATGAGATGACAGGCACATTACGAGCAAGATATTTCATGACCAGGTGTCG
GCACGAATTATGCACATGTTACCCCTCCAAAAAAAAAGACCTCTCTAAAA
AGGAGGCAACACACTTTACATGTTAATAATACTTTTTATAGCATTAGCGT
TACGACAGCAATAGATCTAAACTCCATTATTGCAACAATGACATAGAAAA
GAGTGTACCG back to topCoding sequence (CDS) from alignment at ch2:3243934..3247893- >KJC3_002676-T2 ID=KJC3_002676-T2|Name=KJC3_002676-T2|organism=Aspergillus niger KJC3|type=CDS|length=4266bp|location=Sequence derived from alignment at ch2:3243934..3247893- (Aspergillus niger KJC3)
CTTCGCGCCACCCTTCCCGTCTCGATCTTTATCTCTCCTAGCCTAGCCAT
CGATGAGAACAACAACCTTGTCGACCAAACCCCTCATTCTGCTCAAAGAG
CGATCGATGATCTCGCTCAGCAGGCTCCTCCCTTGTACGGCGAGCATCAA
TTCGACCAACTGTACAGCGAACTTGATCCTTCGGGATACCGTACCCCTGG
CCCTGGAAGTGGTCCTGGTACTCCGTTCGGCACCCTCAGCCGTAATCTGT
CGGCGGAGAACCTTGCTTCGATGAATGCGTTGACCAACACCGACATCTCC
GCTTCTGCCTTGCACACCCGTCTATCGATCTTGCGCGCCAATGGACATGA
TCAACCTTCCCCTACCGACCAAGAGCATCCGGACAACGATAGCCGTCGCC
TAGGCGTTCCTCCCGATTACTTCGGAGCGGGATCCGGTTCCAACTCGCAC
AGTCCCGCTAGCCCCGAGCTCTCTCGCCGTGCCTCCGATGAGGTCGATCA
CGACTACATTCACTCCGGAATGGCGACTCCCTACCATCCTCAGTATGCCG
AGGTCGAGACCCTGAGCCGTGTGCCGAGTTACTCCACCGCCGTCCGCACT
ACTGTCCGCCCTTGCGACTCCGAACTGCCTGATTACCAAGCCGTCATAGC
CGAGGATGTTGTCATCTCAGCGCCCCAGTCGCCTCAGCAGGCTCATGTCC
GCACCGCCGGCCGCGGGTCTTCATATTTCTCCGCCATCGATGCGCTTCAC
AGTCGGTCTGGTCTCCTCCACTCCACCTCCAGTCACGACGATGATGAACG
TCGACTGCGTCTTGTCCAAGCTCGAGCCAGGGTCTAATCTGTGGAAAATG
TCTGGCCAAACAAGATAGAATACTCGATCAGTACACCGACGAAGGCCGTG
GTTTTCGGAACCAGCATCCGTGTGGACTTCAAGCTGATCCCTCTCCTGAA
GGGACTCAGAATTGGACAGATTGTCTCTCAGCTCATTGAAAGCCACGACC
TTACCCTCAACCCCGAAGACCCTGATTCCGTCCGCAACACATACAAGAGT
ACGAGAACCATTTTGAACGATGAGCATGAGCTGGATGAGGATAGCGGCCT
GGAAATTATCGATGAAATGGCAGAGGGATACCAGTTTTCGCGTCATCTGG
AACTGCCCAAGACTTTGACTCGGTGCCTGCAGGACACTGACACCAGGGGC
ATCAAAATTCGTCACAAGCTCAAGTTTCGCGTTCAGCTCTTGAACCCTGA
TGGACATGTCAGCGAGATGCCGGAGAGCGTTGAAGGCCTTAACGACACCT
ACGTGACCTATCGCTTCAAGGCGGAAATCGGACGCAAATATGCCAAGGAC
ATTGTTGTTCGTCGGCCGCTCCGTATCATTCGGACTCTGGAGCCTAGTGC
TCTTGAGCTTGCACACGCAATGCTTCGCGCCACCCTTCCCGTCTCGATCT
TTATCTCTCCTAGCCTAGCCATCGATGAGAACAACAACCTTGTCGACCAA
ACCCCTCATTCTGCTCAAAGAGCGATCGATGATCTCGCTCAGCAGGCTCC
TCCCTTGTACGGCGAGCATCAATTCGACCAACTGTACAGCGAACTTGATC
CTTCGGGATACCGTACCCCTGGCCCTGGAAGTGGTCCTGGTACTCCGTTC
GGCACCCTCAGCCGTAATCTGTCGGCGGAGAACCTTGCTTCGATGAATGC
GTTGACCAACACCGACATCTCCGCTTCTGCCTTGCACACCCGTCTATCGA
TCTTGCGCGCCAATGGACATGATCAACCTTCCCCTACCGACCAAGAGCAT
CCGGACAACGATAGCCGTCGCCTAGGCGTTCCTCCCGATTACTTCGGAGC
GGGATCCGGTTCCAACTCGCACAGTCCCGCTAGCCCCGAGCTCTCTCGCC
GTGCCTCCGATGAGGTCGATCACGACTACATTCACTCCGGAATGGCGACT
CCCTACCATCCTCAGTATGCCGAGGTCGAGACCCTGAGCCGTGTGCCGAG
TTACTCCACCGCCGTCCGCACTACTGTCCGCCCTTGCGACTCCGAACTGC
CTGATTACCAAGCCGTCATAGCCGAGGATGTTGTCATCTCAGCGCCCCAG
TCGCCTCAGCAGGCTCATGTCCGCACCGCCGGCCGCGGGTCTTCATATTT
CTCCGCCATCGATGCGCTTCACAGTCGGTCTGGTCTCCTCCACTCCACCT
CCAGTCACGACGATGATGAACGTCGACTGCGTCTTGTCCAAGCTCGAGCC
AGGGTCTAATCTGTGGAAAATGTCTGGCCAAACAAGATAGAATACTCGAT
CAGTACACCGACGAAGGCCGTGGTTTTCGGAACCAGCATCCGTGTGGACT
TCAAGCTGATCCCTCTCCTGAAGGGACTCAGAATTGGACAGATTGTCTCT
CAGCTCATTGAAAGCCACGACCTTACCCTCAACCCCGAAGACCCTGATTC
CGTCCGCAACACATACAAGAGTACGAGAACCATTTTGAACGATGAGCATG
AGCTGGATGAGGATAGCGGCCTGGAAATTATCGATGAAATGGCAGAGGGA
TACCAGTTTTCGCGTCATCTGGAACTGCCCAAGACTTTGACTCGGTGCCT
GCAGGACACTGACACCAGGGGCATCAAAATTCGTCACAAGCTCAAGTTTC
GCGTTCAGCTCTTGAACCCTGATGGACATGTCAGCGAGATGCCGGAGAGC
GTTGAAGGCCTTAACGACACCTACGTGACCTATCGCTTCAAGGCGGAAAT
CGGACGCAAATATGCCAAGGACATTGTTGTTCGTCGGCCGCTCCGTATCA
TTCGGACTCTGGAGCCTAGTGCTCTTGAGCTTGCACACGCAATGCTTCGC
GCCACCCTTCCCGTCTCGATCTTTATCTCTCCTAGCCTAGCCATCGATGA
GAACAACAACCTTGTCGACCAAACCCCTCATTCTGCTCAAAGAGCGATCG
ATGATCTCGCTCAGCAGGCTCCTCCCTTGTACGGCGAGCATCAATTCGAC
CAACTGTACAGCGAACTTGATCCTTCGGGATACCGTACCCCTGGCCCTGG
AAGTGGTCCTGGTACTCCGTTCGGCACCCTCAGCCGTAATCTGTCGGCGG
AGAACCTTGCTTCGATGAATGCGTTGACCAACACCGACATCTCCGCTTCT
GCCTTGCACACCCGTCTATCGATCTTGCGCGCCAATGGACATGATCAACC
TTCCCCTACCGACCAAGAGCATCCGGACAACGATAGCCGTCGCCTAGGCG
TTCCTCCCGATTACTTCGGAGCGGGATCCGGTTCCAACTCGCACAGTCCC
GCTAGCCCCGAGCTCTCTCGCCGTGCCTCCGATGAGGTCGATCACGACTA
CATTCACTCCGGAATGGCGACTCCCTACCATCCTCAGTATGCCGAGGTCG
AGACCCTGAGCCGTGTGCCGAGTTACTCCACCGCCGTCCGCACTACTGTC
CGCCCTTGCGACTCCGAACTGCCTGATTACCAAGCCGTCATAGCCGAGGA
TGTTGTCATCTCAGCGCCCCAGTCGCCTCAGCAGGCTCATGTCCGCACCG
CCGGCCGCGGGTCTTCATATTTCTCCGCCATCGATGCGCTTCACAGTCGG
TCTGGTCTCCTCCACTCCACCTCCAGTCACGACGATGATGAACGTCGACT
GCGTCTTGTCCAAGCTCGAGCCAGGGTCTAATCTGTGGAAAATGTCTGGC
CAAACAAGATAGAATACTCGATCAGTACACCGACGAAGGCCGTGGTTTTC
GGAACCAGCATCCGTGTGGACTTCAAGCTGATCCCTCTCCTGAAGGGACT
CAGAATTGGACAGATTGTCTCTCAGCTCATTGAAAGCCACGACCTTACCC
TCAACCCCGAAGACCCTGATTCCGTCCGCAACACATACAAGAGTACGAGA
ACCATTTTGAACGATGAGCATGAGCTGGATGAGGATAGCGGCCTGGAAAT
TATCGATGAAATGGCAGAGGGATACCAGTTTTCGCGTCATCTGGAACTGC
CCAAGACTTTGACTCGGTGCCTGCAGGACACTGACACCAGGGGCATCAAA
ATTCGTCACAAGCTCAAGTTTCGCGTTCAGCTCTTGAACCCTGATGGACA
TGTCAGCGAGATGCCGGAGAGCGTTGAAGGCCTTAACGACACCTACGTGA
CCTATCGCTTCAAGGCGGAAATCGGACGCAAATATGCCAAGGACATTGTT
GTTCGTCGGCCGCTCCGTATCATTCGGACTCTGGAGCCTAGTGCTCTTGA
GCTTGCACACGCAATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002676-T2.utr3p1 | KJC3_002676-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011022 |
| DBxref | PFAM:PF02752 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3243934..3247893 - |
|
