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KJC3_002679-T1, KJC3_002679-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002679-T1
Unique NameKJC3_002679-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3262992..3264868-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002679-T1 ID=KJC3_002679-T1|Name=KJC3_002679-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1877bp|location=Sequence derived from alignment at ch2:3262992..3264868- (Aspergillus niger KJC3)
CTCCTTAACCCTCTCTTCGCCCTCAGTTTCCGTCAAGCATAGCCAGAATG
CCTCTCGGAATTCACAATCCGTTACCTTCATCGTTAGGAAGTATGTTCCG
CGCCGTTTTCGTTCCAATTTCCCCGCAATTCTCTTAAACAGGTGGTTCGG
CTGCGACTAACAATCAGACAGGCGAATGTAGAAAGGCGGGCAAAATCCTC
GCCTCCTTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGATTCC
TCCGGAGATTTTGGCAGGAGCCAAGGTAATTAGCAAATTCAATACTGAGC
CTGTTGCTCGAAAGTCGCACCGTCGCTCACGGTTTCTTCCCTAGGGTCTC
GCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTTCGG
TTCTGGTGTCGTCGTCGCTCGACTAGCTGATGGAACCTGGTCTGCTCCGT
CGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTTGAG
TTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGACCTT
CTCGCAGGTCGGGACCCTGACGCTAGGTGGAAACGTTTCGATCGCTGCTG
GACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAGGGT
GTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGGTGT
CAGTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGATGCGAACGAGAAGA
TGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATTCGA
CCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGCGTT
CTACGGCAATTCCCGGAATGGTAGTGATATGTACAACGACATCCCCGTTT
ATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAGGCG
TACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGGTTC
AGATGACTTCCGGGACCGGCCCCGCCGTGCGAATACATGGGCAGACGATA
TATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGGTAC
AGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCGGAGCAATAC
CACCCCAATCGACGAGGACTATGTATATTCTGACCGCAAGCCTAGCCGAC
CCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCTGCT
CTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGCGGACCAGGA
AGGTGACTTGGGTTTCAAGAAAGGAGACATCATTACCATCCTCAAGAGGA
CTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTTGGC
ATTTTCCCAAGGTAAGCAGGCCCGCGTTTCGCAGAAACCATGTCTTCCTC
GGCCATGAAACTAATCATTGCTATTCAGTAACTATGTCGAAACTGCTTAG
GAGTCGGCTTGTCCTAGTTGGACTCACGCGGAATGATATTGGACGATGCG
AGCACTTTTAACGCCTTGTTCCTCTTTACGAATGCTTCGATGTTCCTTTC
TTGTTTGGTATTGAGCTCTCTTGTCATCGTTTAAGACTCACCCCCTTTAG
TTTTTGTTCTCTCTTTGCTTTTTCCTGTCGGCTTTCTAGTGTAAGCGCCG
GAGTTGCCTGTTGGGCCGACCAGCGGATTCGGGGTGGCTTTTGAACGGAT
AAGTGACAAAACGGGACAGTTACACCTGTGTATGTGTTCTCTTTGGCGAT
GGTTCTAGCTTTTGGTATATGCTTGTGTGATAGTGTTGGACCACCTCTGG
GTATACATAAGACTTCCCTCTTGCTGT
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Coding sequence (CDS) from alignment at ch2:3262992..3264868-

>KJC3_002679-T1 ID=KJC3_002679-T1|Name=KJC3_002679-T1|organism=Aspergillus niger KJC3|type=CDS|length=4944bp|location=Sequence derived from alignment at ch2:3262992..3264868- (Aspergillus niger KJC3)
TAACTATGTCGAAACTGCTTAGGGTCTCGCCGTTCTTACTGTCCTGAAAG
CTGGATTTTTGGGCTCAGCTCGGTTCGGTTCTGGTGTCGTCGTCGCTCGA
CTAGCTGATGGAACCTGGTCTGCTCCGTCGGCCATTGCCACTGCTGGTGC
TGGGTTCGGAGGTCAGATTGGGTTTGAGTTAACCGACTTTGTGTTTATCT
TGAACGATGCCGCAGCCGTCCGGACCTTCTCGCAGGTCGGGACCCTGACG
CTAGGTGGAAACGTTTCGATCGCTGCTGGACCGGTCGGACGAAACGCGGA
AGCTGCTGGTGCGGCTAGCACAAAGGGTGTGGCGGCAGTGTTCTCATACT
CCAAGACCAAGGGTCTCTTTGCCGGTGTCAGTCTGGAGGGAAGCATGCTG
GTGGAACGTAAGGATGCGAACGAGAAGATGTACAACAGCCGGGTTTCGGC
ACGCCAGCTCCTCAGCGGAACCATTCGACCTCCCCCGGGCGCGGATCCTC
TCCTGACCGTATTGAACTCGCGTGCGTTCTACGGCAATTCCCGGAATGGT
AGTGATATGTACAACGACATCCCCGTTTATGATGACAGCCATGACGATGT
GGTTTGGGAGGGCCGCAGGGGCGAGGCGTACGGCGAAGGAACGCGGCGCG
ACCGCACTGGGTTCAGTGGCTCAGGTTCAGATGACTTCCGGGACCGGCCC
CGCCGTGCGAATACATGGGCAGACGATATATATGATCGACCTGCTGGAGG
GTTGAGCCGTTCATCGACTACTCGGTACAGCGGTCGCACCGACAATTACG
ACTCCTTCAACCGCAGCCGGAGCAATACCACCCCAATCGACGAGGACTAT
GTATATTCTGACCGCAAGCCTAGCCGACCCACAGCTCCAAAACCGGTGTT
TGGACAGCGGACCGGGGCGGCTCCTGCTCTACGCCAGGACCAGGCCATAG
CACTGTACACCTTTGATGCGGACCAGGAAGGTGACTTGGGTTTCAAGAAA
GGAGACATCATTACCATCCTCAAGAGGACTGACAAGAAAGAGGACTGGTG
GACCGGGCGGATCGGGAGTCGCGTTGGCATTTTCCCAAGGCGAATGTAGA
AAGGCGGGCAAAATCCTCGCCTCCTTTGTCGATCCACGACAAGCGTTTGG
GCCCGATAAAGTGATTCCTCCGGAGATTTTGGCAGGAGCCAAGATGCCTC
TCGGAATTCACAATCCGTTACCTTCATCGTTAGGAATAACTATGTCGAAA
CTGCTTAGGGTCTCGCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGC
TCAGCTCGGTTCGGTTCTGGTGTCGTCGTCGCTCGACTAGCTGATGGAAC
CTGGTCTGCTCCGTCGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTC
AGATTGGGTTTGAGTTAACCGACTTTGTGTTTATCTTGAACGATGCCGCA
GCCGTCCGGACCTTCTCGCAGGTCGGGACCCTGACGCTAGGTGGAAACGT
TTCGATCGCTGCTGGACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGG
CTAGCACAAAGGGTGTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGT
CTCTTTGCCGGTGTCAGTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGA
TGCGAACGAGAAGATGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCA
GCGGAACCATTCGACCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTG
AACTCGCGTGCGTTCTACGGCAATTCCCGGAATGGTAGTGATATGTACAA
CGACATCCCCGTTTATGATGACAGCCATGACGATGTGGTTTGGGAGGGCC
GCAGGGGCGAGGCGTACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTC
AGTGGCTCAGGTTCAGATGACTTCCGGGACCGGCCCCGCCGTGCGAATAC
ATGGGCAGACGATATATATGATCGACCTGCTGGAGGGTTGAGCCGTTCAT
CGACTACTCGGTACAGCGGTCGCACCGACAATTACGACTCCTTCAACCGC
AGCCGGAGCAATACCACCCCAATCGACGAGGACTATGTATATTCTGACCG
CAAGCCTAGCCGACCCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCG
GGGCGGCTCCTGCTCTACGCCAGGACCAGGCCATAGCACTGTACACCTTT
GATGCGGACCAGGAAGGTGACTTGGGTTTCAAGAAAGGAGACATCATTAC
CATCCTCAAGAGGACTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCG
GGAGTCGCGTTGGCATTTTCCCAAGGCGAATGTAGAAAGGCGGGCAAAAT
CCTCGCCTCCTTTGTCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGA
TTCCTCCGGAGATTTTGGCAGGAGCCAAGATGCCTCTCGGAATTCACAAT
CCGTTACCTTCATCGTTAGGAATAACTATGTCGAAACTGCTTAGGGTCTC
GCCGTTCTTACTGTCCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTTCGG
TTCTGGTGTCGTCGTCGCTCGACTAGCTGATGGAACCTGGTCTGCTCCGT
CGGCCATTGCCACTGCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTTGAG
TTAACCGACTTTGTGTTTATCTTGAACGATGCCGCAGCCGTCCGGACCTT
CTCGCAGGTCGGGACCCTGACGCTAGGTGGAAACGTTTCGATCGCTGCTG
GACCGGTCGGACGAAACGCGGAAGCTGCTGGTGCGGCTAGCACAAAGGGT
GTGGCGGCAGTGTTCTCATACTCCAAGACCAAGGGTCTCTTTGCCGGTGT
CAGTCTGGAGGGAAGCATGCTGGTGGAACGTAAGGATGCGAACGAGAAGA
TGTACAACAGCCGGGTTTCGGCACGCCAGCTCCTCAGCGGAACCATTCGA
CCTCCCCCGGGCGCGGATCCTCTCCTGACCGTATTGAACTCGCGTGCGTT
CTACGGCAATTCCCGGAATGGTAGTGATATGTACAACGACATCCCCGTTT
ATGATGACAGCCATGACGATGTGGTTTGGGAGGGCCGCAGGGGCGAGGCG
TACGGCGAAGGAACGCGGCGCGACCGCACTGGGTTCAGTGGCTCAGGTTC
AGATGACTTCCGGGACCGGCCCCGCCGTGCGAATACATGGGCAGACGATA
TATATGATCGACCTGCTGGAGGGTTGAGCCGTTCATCGACTACTCGGTAC
AGCGGTCGCACCGACAATTACGACTCCTTCAACCGCAGCCGGAGCAATAC
CACCCCAATCGACGAGGACTATGTATATTCTGACCGCAAGCCTAGCCGAC
CCACAGCTCCAAAACCGGTGTTTGGACAGCGGACCGGGGCGGCTCCTGCT
CTACGCCAGGACCAGGCCATAGCACTGTACACCTTTGATGCGGACCAGGA
AGGTGACTTGGGTTTCAAGAAAGGAGACATCATTACCATCCTCAAGAGGA
CTGACAAGAAAGAGGACTGGTGGACCGGGCGGATCGGGAGTCGCGTTGGC
ATTTTCCCAAGGCGAATGTAGAAAGGCGGGCAAAATCCTCGCCTCCTTTG
TCGATCCACGACAAGCGTTTGGGCCCGATAAAGTGATTCCTCCGGAGATT
TTGGCAGGAGCCAAGATGCCTCTCGGAATTCACAATCCGTTACCTTCATC
GTTAGGAATAACTATGTCGAAACTGCTTAGGGTCTCGCCGTTCTTACTGT
CCTGAAAGCTGGATTTTTGGGCTCAGCTCGGTTCGGTTCTGGTGTCGTCG
TCGCTCGACTAGCTGATGGAACCTGGTCTGCTCCGTCGGCCATTGCCACT
GCTGGTGCTGGGTTCGGAGGTCAGATTGGGTTTGAGTTAACCGACTTTGT
GTTTATCTTGAACGATGCCGCAGCCGTCCGGACCTTCTCGCAGGTCGGGA
CCCTGACGCTAGGTGGAAACGTTTCGATCGCTGCTGGACCGGTCGGACGA
AACGCGGAAGCTGCTGGTGCGGCTAGCACAAAGGGTGTGGCGGCAGTGTT
CTCATACTCCAAGACCAAGGGTCTCTTTGCCGGTGTCAGTCTGGAGGGAA
GCATGCTGGTGGAACGTAAGGATGCGAACGAGAAGATGTACAACAGCCGG
GTTTCGGCACGCCAGCTCCTCAGCGGAACCATTCGACCTCCCCCGGGCGC
GGATCCTCTCCTGACCGTATTGAACTCGCGTGCGTTCTACGGCAATTCCC
GGAATGGTAGTGATATGTACAACGACATCCCCGTTTATGATGACAGCCAT
GACGATGTGGTTTGGGAGGGCCGCAGGGGCGAGGCGTACGGCGAAGGAAC
GCGGCGCGACCGCACTGGGTTCAGTGGCTCAGGTTCAGATGACTTCCGGG
ACCGGCCCCGCCGTGCGAATACATGGGCAGACGATATATATGATCGACCT
GCTGGAGGGTTGAGCCGTTCATCGACTACTCGGTACAGCGGTCGCACCGA
CAATTACGACTCCTTCAACCGCAGCCGGAGCAATACCACCCCAATCGACG
AGGACTATGTATATTCTGACCGCAAGCCTAGCCGACCCACAGCTCCAAAA
CCGGTGTTTGGACAGCGGACCGGGGCGGCTCCTGCTCTACGCCAGGACCA
GGCCATAGCACTGTACACCTTTGATGCGGACCAGGAAGGTGACTTGGGTT
TCAAGAAAGGAGACATCATTACCATCCTCAAGAGGACTGACAAGAAAGAG
GACTGGTGGACCGGGCGGATCGGGAGTCGCGTTGGCATTTTCCCAAGGCG
AATGTAGAAAGGCGGGCAAAATCCTCGCCTCCTTTGTCGATCCACGACAA
GCGTTTGGGCCCGATAAAGTGATTCCTCCGGAGATTTTGGCAGGAGCCAA
GATGCCTCTCGGAATTCACAATCCGTTACCTTCATCGTTAGGAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002679KJC3_002679Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002679-T1KJC3_002679-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002679-T1.cdsKJC3_002679-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002679-T1.utr3p1KJC3_002679-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002679-T1.exon4KJC3_002679-T1.exon4Aspergillus niger KJC3exon
KJC3_002679-T1.exon3KJC3_002679-T1.exon3Aspergillus niger KJC3exon
KJC3_002679-T1.exon2KJC3_002679-T1.exon2Aspergillus niger KJC3exon
KJC3_002679-T1.exon1KJC3_002679-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002679-T1.utr5p1KJC3_002679-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036028
DBxrefInterPro:IPR033643
DBxrefInterPro:IPR007461
DBxrefInterPro:IPR001452
DBxrefPFAM:PF04366
DBxrefPFAM:PF14604
DBxrefPFAM:PF07653
DBxrefPFAM:PF00018
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3262992..3264868 -
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