|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3276204..3278977+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002683-T1 ID=KJC3_002683-T1|Name=KJC3_002683-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2774bp|location=Sequence derived from alignment at ch2:3276204..3278977+ (Aspergillus niger KJC3)
CGTCTATTATTGAGGTATCATGGCAGTGAGTCTGGAAATCACTCTATGTG
GAAATACGCCAGCTAAAGTTTTATCATCGCTAGCAGTCAGTTCGCGCTAT
AAACACAGCCACGAACGACCAAGAATGGCTAGGTTCGGACTCAGACCAAC
ATACACTGTTCCAGGCCTTCTCTGGAAATGCTGTTATGATTTCATCGGAT
TCTACACATTATAAGGTTGCGCATATGCCTTGTATACAAGGTGATAAATG
CTGAGACGTTAAGAGCAACAACAGGACTGCAGGCGCAGCATGGCGGGCTA
GATAGATCGAATGAATACACTTCAAGTTGCACGGCCCTACTATTTGTATA
ATAGTAACTTGGCTGTTATCCATATGTGATGCGAGACAGGCAGTGGGGCA
GCTACGAGGCAGGGACCAAGGGGTCCCGATCTGACACGTTTTGAGATGCA
TTTGCGCAGGAATCTAGGGGTATGCCTCCACGAGGACGCGCGCGATACTG
GTACGCACCTTTGATCCTATAACCCCTCGCATACATCGGTATGTTTCCCG
TGAAGCTGGACCTTGATACATGTAGCTCATGTCTGAAAATGGTCAACTAA
CGGCGGACTGAGGCCCTCTTACCTAGTACGCATCCCTTCGTGGTCACATT
CCTCGGAACTCCATCACACCCATGGGAGGAAATTGTGCTACACAAACCAA
GTTCGAGGATTCCTCACCCTTGCAAACATTACTAGGAACAGCCTAAAAGC
CAGTATGAACAATGAAGGGGATTCCAACAAGCGCAATGTTCCCACAATTG
TCCAATAGTGCGGCATACACTGTATTGCCTCTTCCACAACAGAGTTGCTT
GCGAATATGGCTTGCCAAATGAATGCGGCCGTCCACGGTTTAGCTATGTG
TGCTGGGCTCAGTCCAGGCAGTTCATTCGCTATGCCTCATCGGCATATCA
TATTTCGTGATCAAGCGGGCTTTTTCGGTATATAAACCAAGGCCTGTTCA
CTTGGTCTTCGGTTATGCGGTTCTCATTCACATCCCAGTCGACCCTTGTT
TCTGCTGTTTTTCGCTTGTTGCTCCTTTTAAGTCTGGTTTAGTCGGTGTT
TTTGAGTATTCAGAGCAGTCATCAACCAGCCTGCGTCATCATGAAGGCCC
AAACAGCGGCAATTATCCTGTCGTTCTGCAGCTCTATTCTCGCTGTCCCT
GTCCACAACCCGGATGCTAAACGGGCTGCTTATCCGAGTAGCCAGCCCCA
ATGGCCCACCGATCCTTTCGGGAGCGGATTCCCCTTTTCTTTTGGTTCCC
ACGGGAATAAGGAACAGGCTCCTGGCAGCAGCAGCATAGCCACTCCTTCG
GGCACCCCATTTAGCCTCCCGTCAGGGGCTTCCAGCGGAGTCCCACGGCC
TGTCGCGACTCCCGCTCCTAACCAGCTCGTCCATGGGCCCTTTTCTGTCA
ACGCTCCCCCAGCCAATGGGGTCGCTTCCAGGCCCACGGAAACCTCAGTG
AGCGCTCCGGCCGGACAAGTTGCTGGCGCTGGACGACCTCAAAGCCAGTC
CTCCCAGGGATTCCCGCCATACGGGCAAACCGAAGGTGTGTCACCTAGCG
GCGGTCTTTCTGGAGGCCCGCCCTCGGAGGGTTCTGCCCCGAGCAGCCAA
GACCCCGGTAGCATCGATACAAGCTCTGCTTACGAAGATGGATATTATGT
GGGATACACCCCAACTGGCCACACGTCTGCTCCTTCCAATAGTGAGCCTA
CTAGCAGTCCTGGTGGCCAGACTGGCCAGTACCCAGGCGCTCAACACACT
GGTGTTCCTGGAGGTCAGCAATCTCAGGGCTACCCTTCGAGCGGACAGTA
CCCTGGTGAGTCTAGTACAACGCCTTTCGGGGGTCATTCTCAGAGTACAA
GTGGCCAGTACCCGTATGGCCAATCTACTGGAGCTCCTTCTGAAGGAGGA
TACACTCCTAGTGGTTCCACGACTGGTGGACAATATCCTGGTTCTGGCTC
CGGATCTGTGTACCCAGGTGAACAATCAACAGGACCATTTGGCAACAGCT
ACCCCAGTGAACAGTCGAGCGAGCCCTCAACCAACGGCTACCCTAGCACT
GGCCACTCAACGAGTTCTTACCCCAGTACCGGATACTCTGGAGGCTCTTC
TTCTGGAGCTACCTACCCTTCATCTGGGCACTCCGCAGGGACTTATCCTA
GCTCTGGCCAGTTCAAGAGCCCCTCCCAGGGCACCTATCCTTCCACTGGG
CAGTCAACGGGCTCCTTTCCTGGCTCGGGACTTTCTGGAAGTACTTCGGG
AGCCAGCTATCCTTCGTCGGAGCATTCGACGGGCAGCTACCCTGTTGCGG
GGTCTTCCCAGGGCCCTTCCAGCGGCGCTAGTTTCCCTTCCACTGGCCAC
TCCGCGAGCACCTTCCCTGGAACTGGGTATTCGGAAGGCACTGGAGCTGG
AAGCACCTACCCATCCTCCGGACACTCCACGGGCAGCATCCCTAGCTCTG
GATATTCTGAGGGTCGTCCTTCCACTGGAGCTGGCTATCCTGCCACGGGT
AGCTCTCAGAGCGGATATTCCGGGACTTCTCAGGGTCAGCATGGGTTCTA
AGGGATGAGAAGTGGGAAAGCAGTAGAAATTTTCGGGTACAAGCGAGTTC
AGCATTGGTTTAGTATTATGTCGATCTTGAATTAATATCTTGCAATAATG
AGTTGTCATCAAACTTGACATCGTAGCCAAGCCGTGGTGGGAATAGTTGA
TCCACGAGTATGGAAGATACCTAG back to topCoding sequence (CDS) from alignment at ch2:3276204..3278977+ >KJC3_002683-T1 ID=KJC3_002683-T1|Name=KJC3_002683-T1|organism=Aspergillus niger KJC3|type=CDS|length=1461bp|location=Sequence derived from alignment at ch2:3276204..3278977+ (Aspergillus niger KJC3)
ATGAAGGCCCAAACAGCGGCAATTATCCTGTCGTTCTGCAGCTCTATTCT
CGCTGTCCCTGTCCACAACCCGGATGCTAAACGGGCTGCTTATCCGAGTA
GCCAGCCCCAATGGCCCACCGATCCTTTCGGGAGCGGATTCCCCTTTTCT
TTTGGTTCCCACGGGAATAAGGAACAGGCTCCTGGCAGCAGCAGCATAGC
CACTCCTTCGGGCACCCCATTTAGCCTCCCGTCAGGGGCTTCCAGCGGAG
TCCCACGGCCTGTCGCGACTCCCGCTCCTAACCAGCTCGTCCATGGGCCC
TTTTCTGTCAACGCTCCCCCAGCCAATGGGGTCGCTTCCAGGCCCACGGA
AACCTCAGTGAGCGCTCCGGCCGGACAAGTTGCTGGCGCTGGACGACCTC
AAAGCCAGTCCTCCCAGGGATTCCCGCCATACGGGCAAACCGAAGGTGTG
TCACCTAGCGGCGGTCTTTCTGGAGGCCCGCCCTCGGAGGGTTCTGCCCC
GAGCAGCCAAGACCCCGGTAGCATCGATACAAGCTCTGCTTACGAAGATG
GATATTATGTGGGATACACCCCAACTGGCCACACGTCTGCTCCTTCCAAT
AGTGAGCCTACTAGCAGTCCTGGTGGCCAGACTGGCCAGTACCCAGGCGC
TCAACACACTGGTGTTCCTGGAGGTCAGCAATCTCAGGGCTACCCTTCGA
GCGGACAGTACCCTGGTGAGTCTAGTACAACGCCTTTCGGGGGTCATTCT
CAGAGTACAAGTGGCCAGTACCCGTATGGCCAATCTACTGGAGCTCCTTC
TGAAGGAGGATACACTCCTAGTGGTTCCACGACTGGTGGACAATATCCTG
GTTCTGGCTCCGGATCTGTGTACCCAGGTGAACAATCAACAGGACCATTT
GGCAACAGCTACCCCAGTGAACAGTCGAGCGAGCCCTCAACCAACGGCTA
CCCTAGCACTGGCCACTCAACGAGTTCTTACCCCAGTACCGGATACTCTG
GAGGCTCTTCTTCTGGAGCTACCTACCCTTCATCTGGGCACTCCGCAGGG
ACTTATCCTAGCTCTGGCCAGTTCAAGAGCCCCTCCCAGGGCACCTATCC
TTCCACTGGGCAGTCAACGGGCTCCTTTCCTGGCTCGGGACTTTCTGGAA
GTACTTCGGGAGCCAGCTATCCTTCGTCGGAGCATTCGACGGGCAGCTAC
CCTGTTGCGGGGTCTTCCCAGGGCCCTTCCAGCGGCGCTAGTTTCCCTTC
CACTGGCCACTCCGCGAGCACCTTCCCTGGAACTGGGTATTCGGAAGGCA
CTGGAGCTGGAAGCACCTACCCATCCTCCGGACACTCCACGGGCAGCATC
CCTAGCTCTGGATATTCTGAGGGTCGTCCTTCCACTGGAGCTGGCTATCC
TGCCACGGGTAGCTCTCAGAGCGGATATTCCGGGACTTCTCAGGGTCAGC
ATGGGTTCTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002683-T1.utr3p1 | KJC3_002683-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-18) |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3276204..3278977 + |
|
