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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3294624..3297583+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002686-T1 ID=KJC3_002686-T1|Name=KJC3_002686-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2960bp|location=Sequence derived from alignment at ch2:3294624..3297583+ (Aspergillus niger KJC3)
CAGGATCAGCTTGTCTTCATATTTACGCTGCGCCCTCTCTCCCCCGGCTT
TCGACAAAGGAATTGACGCCTGTTTCCGGGTTATATCTGTCGCTGCTGCT
CTTCGATCATCCGCGCAGTGGCTCTTTTGATTGAATTCCAGAGCGCTTCT
CACGCGAACGTCTGTTGTTGTCCCGTCGTCGCATCCTCTCTGGTTTCAAA
TAGGCAGTTCTCCGATAGCTTCATATCGCGACCCAGCTTTCAGCCCGTCA
CCGGAAAGCATCCCTCGAACCCAGCTGGCGAACAAACTCCTCGAAACACG
ACGAAATACCGATTTACGCCAACATACTCCGATCGTCTTAGAAAGGGAAT
TCGGAACGATATTCCAAAAAGACAAGAAAACGGCCTTCGAGAAACGGAGC
ATTTTCGAGTCCAACCTTTTTTGGCGCGTCCAGTAACGAGGTCTCGCGCT
TCTTTTGCGGAAGGTGCCCTTGATCAATAGACTGGGTCCGTTGGGTCGAC
CTTGGTCTTTCTCAGAGGTATTCCAGGGCGCCCTACAGAACCGGTTATCC
CCTTCGAAGGCGCGGAGCGATACACTCAATCGGTTTTTGGCGTGCTCGAG
TCAAAGCCAACATGTCTTCCCAAACCCCCCGCACGTCCCTCCGAGGTAAG
TGCTATCACCCTCATTTTGCCTGTGTCACTCGCGTCTTTGTTGGACGACC
AGTGCTAACCGTCCGTAGAGGGCTTGCGGCAGGCTCCCAAGGCCAATCAA
CCATTCATTCCCGATACTGCTCCGGTTCGGCGCTCACACCACAACTCAAA
TCAGTCACCTCAGCCAAGCTCGATGTCACAAACGCATTCGAATTCCCCCG
CGCCCAACTCAAACAATTCACATCTACCCACGGAGGGCTGGGACGGCAAA
GAGCAGAAAGTACCTATGAACACACGCGAAGTAGCAACCCCAGGCAACAG
GCCGGGCCTCTTTCTCACCGTACCGGGCAAAGTGGCTAAACAACCTGATT
TCTACGACCCTTACTTTCCCCTCAGATACCTCGAGGTCCCCAAGTGTGCG
TAGGCCTTTGCAGCAACCCATGATTATGACGATAATACCACTGACACGCT
ATAGCGGACCATATCTATAAGCGCGCCCACTACGGCCTGCAATCTGGTAT
ATCAGATGAGGTCGATTTCGCTCTGTACCATCTTGTTCAGATTTCCAACC
AGCGCTGGGACAAATTCAAGTTCGAGGGTTTCCCTTTGCTGGCCGAAACT
CTGATGGAAAAAGCCATTGATGTCTCCATAATATGCACGGGCGTAAAATG
GGAACTTCAGTACGAATACCGCCATCCTATGGAGCGTGTTAATGTCCTCA
ACTCGCTACATGGAACACGCGATTTGCTCGAGAGGATCAAGAGAATTCCC
GTCACTCTGCCAAGTGATACTCTCGAAACGCACGAGTTCAACCACCGTCT
ACGGAATGTCAAAGAAGCTACCCTGGTTCTCCGGAACATGGTTCTACTCC
CAGATAACGCGTTCTATGTCTCACGTTATGCGAAGGGACTTTTGAGGGAC
TTCCTGGTCATACTGCTCAATCTTCCCAACCAGCCTCGCCTCAACGAAAT
CAAGAACGATGCGTTAGACATTGCGGAAGAGGTTACCAAGTTCATGAGGA
CCGACCCTGAAGACCCGCTTTGGATCTCTCTCCTCCACTGCCTCGAGTCC
CCAGATCGTGCCCACGTCGTCCGGGCGCTCTGGGCGCTCACCCATTTCTC
CACTGAAATCAACGATTCTGAGGGTAACCAAGCCTTGGAACGCATGCCTA
AACAATCCCTGCAACAGATGTACTTCCACACGCTTCTGGACTTGGACAAG
GATATCCTCAGCGGAGCGTTGGACTTTTGGTACCAGTACACGCTTTCCCG
CGAGAACATCGAGACCATGCTTGACATCTTCGACTTCCCAAGCGTGTTCG
TTCCGCGAATGATCGCCTTATTAACCCATGAAGCGCGTCCCAGCAAGAAA
GAGACAGTTCTGCAAGAGGAGAAAGTCGCACCGCCGCCATCCGAGATCCC
TCGTGTGCCGGCAGAACTACTGAAAGATCTCATGGAGCTACAAGAGCCGG
AACGTAGCTCACGCTGGCTGCGTTGTTGCTTCGTTGAGGATGCAGAATGC
GAAATTACTCAAATAGCTCTGTGGCAGGCATACCAGAGCCGATTTGCAGA
CCCCCGTGTTCCGGGTGGTGGTGTCCTCCCTGCCGCCGAATTCATTAAGA
ATGTCAGCACGACATTCACCAATGCGCAAGCGCAGGTCATCAACGGCCCT
GGCGCGGCGACTCGCTTTATCATCAAGGGCATCCGTCCGTTAGAAACAGC
CTACACCTTCCAGGGATTCCCCTACCAATATTGCAAATGGGCCGACAACT
CGAAGCCCACCAAAACCTGCCAGCGCGCTTTCACTACTCCTACCGACCTG
CGCAACCATGTTTTCGCCGACCACATGGAGCTCAAGCCTACGGACACGCC
AGGCCACTACAATCTGGACAATGCCGAATCCCCGATTCACACGTGCCTCT
GGGATAACTGCACCCGGTTCCGTTCTTCCGGCCCCAGCAACAATACCGCC
ATGGTAGCGGGTCATGTGGCATCACACCTGCCTGAAGAGCGCCCTGCTGA
TGCAGAACCCCCGATCTCCAAGCGCGCTGTACTTCAAGAGCGGATCGTCC
GCAAATGGTTCTACATGGATACGCCGGTCAATGAGAGAGCCGAACCCTTC
GGTGTGGCCTACAAGGCGGCGTTGGTGCTGCGCAATATCGCCCGGAACTT
ACCGACCGGCATGGCTCAGAAATACAATGGCCTCTCGTGGAAGAAAGCCG
TATTCCTCAGTCACCGGCCGAAGATTGTGGAAACGTGGGACCGTAACCGG
TCGCTGCGTAAGGAACTCACTGAGTTGATTATGATAATAGAGAAAGAGGA
TTACTATTGA back to topCoding sequence (CDS) from alignment at ch2:3294624..3297583+ >KJC3_002686-T1 ID=KJC3_002686-T1|Name=KJC3_002686-T1|organism=Aspergillus niger KJC3|type=CDS|length=6651bp|location=Sequence derived from alignment at ch2:3294624..3297583+ (Aspergillus niger KJC3)
ATGTCTTCCCAAACCCCCCGCACGTCCCTCCGAGAGGGCTTGCGGCAGGC
TCCCAAGGCCAATCAACCATTCATTCCCGATACTGCTCCGGTTCGGCGCT
CACACCACAACTCAAATCAGTCACCTCAGCCAAGCTCGATGTCACAAACG
CATTCGAATTCCCCCGCGCCCAACTCAAACAATTCACATCTACCCACGGA
GGGCTGGGACGGCAAAGAGCAGAAAGTACCTATGAACACACGCGAAGTAG
CAACCCCAGGCAACAGGCCGGGCCTCTTTCTCACCGTACCGGGCAAAGTG
GCTAAACAACCTGATTTCTACGACCCTTACTTTCCCCTCAGATACCTCGA
GGTCCCCAAGTCGGACCATATCTATAAGCGCGCCCACTACGGCCTGCAAT
CTGGTATATCAGATGAGGTCGATTTCGCTCTGTACCATCTTGTTCAGATT
TCCAACCAGCGCTGGGACAAATTCAAGTTCGAGGGTTTCCCTTTGCTGGC
CGAAACTCTGATGGAAAAAGCCATTGATGTCTCCATAATATGCACGGGCG
TAAAATGGGAACTTCAGTACGAATACCGCCATCCTATGGAGCGTGTTAAT
GTCCTCAACTCGCTACATGGAACACGCGATTTGCTCGAGAGGATCAAGAG
AATTCCCGTCACTCTGCCAAGTGATACTCTCGAAACGCACGAGTTCAACC
ACCGTCTACGGAATGTCAAAGAAGCTACCCTGGTTCTCCGGAACATGGTT
CTACTCCCAGATAACGCGTTCTATGTCTCACGTTATGCGAAGGGACTTTT
GAGGGACTTCCTGGTCATACTGCTCAATCTTCCCAACCAGCCTCGCCTCA
ACGAAATCAAGAACGATGCGTTAGACATTGCGGAAGAGGTTACCAAGTTC
ATGAGGACCGACCCTGAAGACCCGCTTTGGATCTCTCTCCTCCACTGCCT
CGAGTCCCCAGATCGTGCCCACGTCGTCCGGGCGCTCTGGGCGCTCACCC
ATTTCTCCACTGAAATCAACGATTCTGAGGGTAACCAAGCCTTGGAACGC
ATGCCTAAACAATCCCTGCAACAGATGTACTTCCACACGCTTCTGGACTT
GGACAAGGATATCCTCAGCGGAGCGTTGGACTTTTGGTACCAGTACACGC
TTTCCCGCGAGAACATCGAGACCATGCTTGACATCTTCGACTTCCCAAGC
GTGTTCGTTCCGCGAATGATCGCCTTATTAACCCATGAAGCGCGTCCCAG
CAAGAAAGAGACAGTTCTGCAAGAGGAGAAAGTCGCACCGCCGCCATCCG
AGATCCCTCGTGTGCCGGCAGAACTACTGAAAGATCTCATGGAGCTACAA
GAGCCGGAACGTAGCTCACGCTGGCTGCGTTGTTGCTTCGTTGAGGATGC
AGAATGCGAAATTACTCAAATAGCTCTGTGGCAGGCATACCAGAGCCGAT
TTGCAGACCCCCGTGTTCCGGGTGGTGGTGTCCTCCCTGCCGCCGAATTC
ATTAAGAATGTCAGCACGACATTCACCAATGCGCAAGCGCAGGTCATCAA
CGGCCCTGGCGCGGCGACTCGCTTTATCATCAAGGGCATCCGTCCGTTAG
AAACAGCCTACACCTTCCAGGGATTCCCCTACCAATATTGCAAATGGGCC
GACAACTCGAAGCCCACCAAAACCTGCCAGCGCGCTTTCACTACTCCTAC
CGACCTGCGCAACCATGTTTTCGCCGACCACATGGAGCTCAAGCCTACGG
ACACGCCAGGCCACTACAATCTGGACAATGCCGAATCCCCGATTCACACG
TGCCTCTGGGATAACTGCACCCGGTTCCGTTCTTCCGGCCCCAGCAACAA
TACCGCCATGGTAGCGGGTCATGTGGCATCACACCTGCCTGAAGAGCGCC
CTGCTGATGCAGAACCCCCGATCTCCAAGCGCGCTGTACTTCAAGAGCGG
ATCGTCCGCAAATGGTTCTACATGGATACGCCGGTCAATGAGAGAGCCGA
ACCCTTCGGTGTGGCCTACAAGGCGGCGTTGGTGCTGCGCAATATCGCCC
GGAACTTACCGACCGGCATGGCTCAGAAATACAATGGCCTCTCGTGGAAG
AAAGCCGTATTCCTCAGTCACCGGCCGAAGATTGTGGAAACGTGGGACCG
TAACCGGTCGCTGCGTAAGGAACTCACTGAGTTGATTATGATAATAGAGA
AAGAGGATTACTATTGAATGTCTTCCCAAACCCCCCGCACGTCCCTCCGA
GAGGGCTTGCGGCAGGCTCCCAAGGCCAATCAACCATTCATTCCCGATAC
TGCTCCGGTTCGGCGCTCACACCACAACTCAAATCAGTCACCTCAGCCAA
GCTCGATGTCACAAACGCATTCGAATTCCCCCGCGCCCAACTCAAACAAT
TCACATCTACCCACGGAGGGCTGGGACGGCAAAGAGCAGAAAGTACCTAT
GAACACACGCGAAGTAGCAACCCCAGGCAACAGGCCGGGCCTCTTTCTCA
CCGTACCGGGCAAAGTGGCTAAACAACCTGATTTCTACGACCCTTACTTT
CCCCTCAGATACCTCGAGGTCCCCAAGTCGGACCATATCTATAAGCGCGC
CCACTACGGCCTGCAATCTGGTATATCAGATGAGGTCGATTTCGCTCTGT
ACCATCTTGTTCAGATTTCCAACCAGCGCTGGGACAAATTCAAGTTCGAG
GGTTTCCCTTTGCTGGCCGAAACTCTGATGGAAAAAGCCATTGATGTCTC
CATAATATGCACGGGCGTAAAATGGGAACTTCAGTACGAATACCGCCATC
CTATGGAGCGTGTTAATGTCCTCAACTCGCTACATGGAACACGCGATTTG
CTCGAGAGGATCAAGAGAATTCCCGTCACTCTGCCAAGTGATACTCTCGA
AACGCACGAGTTCAACCACCGTCTACGGAATGTCAAAGAAGCTACCCTGG
TTCTCCGGAACATGGTTCTACTCCCAGATAACGCGTTCTATGTCTCACGT
TATGCGAAGGGACTTTTGAGGGACTTCCTGGTCATACTGCTCAATCTTCC
CAACCAGCCTCGCCTCAACGAAATCAAGAACGATGCGTTAGACATTGCGG
AAGAGGTTACCAAGTTCATGAGGACCGACCCTGAAGACCCGCTTTGGATC
TCTCTCCTCCACTGCCTCGAGTCCCCAGATCGTGCCCACGTCGTCCGGGC
GCTCTGGGCGCTCACCCATTTCTCCACTGAAATCAACGATTCTGAGGGTA
ACCAAGCCTTGGAACGCATGCCTAAACAATCCCTGCAACAGATGTACTTC
CACACGCTTCTGGACTTGGACAAGGATATCCTCAGCGGAGCGTTGGACTT
TTGGTACCAGTACACGCTTTCCCGCGAGAACATCGAGACCATGCTTGACA
TCTTCGACTTCCCAAGCGTGTTCGTTCCGCGAATGATCGCCTTATTAACC
CATGAAGCGCGTCCCAGCAAGAAAGAGACAGTTCTGCAAGAGGAGAAAGT
CGCACCGCCGCCATCCGAGATCCCTCGTGTGCCGGCAGAACTACTGAAAG
ATCTCATGGAGCTACAAGAGCCGGAACGTAGCTCACGCTGGCTGCGTTGT
TGCTTCGTTGAGGATGCAGAATGCGAAATTACTCAAATAGCTCTGTGGCA
GGCATACCAGAGCCGATTTGCAGACCCCCGTGTTCCGGGTGGTGGTGTCC
TCCCTGCCGCCGAATTCATTAAGAATGTCAGCACGACATTCACCAATGCG
CAAGCGCAGGTCATCAACGGCCCTGGCGCGGCGACTCGCTTTATCATCAA
GGGCATCCGTCCGTTAGAAACAGCCTACACCTTCCAGGGATTCCCCTACC
AATATTGCAAATGGGCCGACAACTCGAAGCCCACCAAAACCTGCCAGCGC
GCTTTCACTACTCCTACCGACCTGCGCAACCATGTTTTCGCCGACCACAT
GGAGCTCAAGCCTACGGACACGCCAGGCCACTACAATCTGGACAATGCCG
AATCCCCGATTCACACGTGCCTCTGGGATAACTGCACCCGGTTCCGTTCT
TCCGGCCCCAGCAACAATACCGCCATGGTAGCGGGTCATGTGGCATCACA
CCTGCCTGAAGAGCGCCCTGCTGATGCAGAACCCCCGATCTCCAAGCGCG
CTGTACTTCAAGAGCGGATCGTCCGCAAATGGTTCTACATGGATACGCCG
GTCAATGAGAGAGCCGAACCCTTCGGTGTGGCCTACAAGGCGGCGTTGGT
GCTGCGCAATATCGCCCGGAACTTACCGACCGGCATGGCTCAGAAATACA
ATGGCCTCTCGTGGAAGAAAGCCGTATTCCTCAGTCACCGGCCGAAGATT
GTGGAAACGTGGGACCGTAACCGGTCGCTGCGTAAGGAACTCACTGAGTT
GATTATGATAATAGAGAAAGAGGATTACTATTGAATGTCTTCCCAAACCC
CCCGCACGTCCCTCCGAGAGGGCTTGCGGCAGGCTCCCAAGGCCAATCAA
CCATTCATTCCCGATACTGCTCCGGTTCGGCGCTCACACCACAACTCAAA
TCAGTCACCTCAGCCAAGCTCGATGTCACAAACGCATTCGAATTCCCCCG
CGCCCAACTCAAACAATTCACATCTACCCACGGAGGGCTGGGACGGCAAA
GAGCAGAAAGTACCTATGAACACACGCGAAGTAGCAACCCCAGGCAACAG
GCCGGGCCTCTTTCTCACCGTACCGGGCAAAGTGGCTAAACAACCTGATT
TCTACGACCCTTACTTTCCCCTCAGATACCTCGAGGTCCCCAAGTCGGAC
CATATCTATAAGCGCGCCCACTACGGCCTGCAATCTGGTATATCAGATGA
GGTCGATTTCGCTCTGTACCATCTTGTTCAGATTTCCAACCAGCGCTGGG
ACAAATTCAAGTTCGAGGGTTTCCCTTTGCTGGCCGAAACTCTGATGGAA
AAAGCCATTGATGTCTCCATAATATGCACGGGCGTAAAATGGGAACTTCA
GTACGAATACCGCCATCCTATGGAGCGTGTTAATGTCCTCAACTCGCTAC
ATGGAACACGCGATTTGCTCGAGAGGATCAAGAGAATTCCCGTCACTCTG
CCAAGTGATACTCTCGAAACGCACGAGTTCAACCACCGTCTACGGAATGT
CAAAGAAGCTACCCTGGTTCTCCGGAACATGGTTCTACTCCCAGATAACG
CGTTCTATGTCTCACGTTATGCGAAGGGACTTTTGAGGGACTTCCTGGTC
ATACTGCTCAATCTTCCCAACCAGCCTCGCCTCAACGAAATCAAGAACGA
TGCGTTAGACATTGCGGAAGAGGTTACCAAGTTCATGAGGACCGACCCTG
AAGACCCGCTTTGGATCTCTCTCCTCCACTGCCTCGAGTCCCCAGATCGT
GCCCACGTCGTCCGGGCGCTCTGGGCGCTCACCCATTTCTCCACTGAAAT
CAACGATTCTGAGGGTAACCAAGCCTTGGAACGCATGCCTAAACAATCCC
TGCAACAGATGTACTTCCACACGCTTCTGGACTTGGACAAGGATATCCTC
AGCGGAGCGTTGGACTTTTGGTACCAGTACACGCTTTCCCGCGAGAACAT
CGAGACCATGCTTGACATCTTCGACTTCCCAAGCGTGTTCGTTCCGCGAA
TGATCGCCTTATTAACCCATGAAGCGCGTCCCAGCAAGAAAGAGACAGTT
CTGCAAGAGGAGAAAGTCGCACCGCCGCCATCCGAGATCCCTCGTGTGCC
GGCAGAACTACTGAAAGATCTCATGGAGCTACAAGAGCCGGAACGTAGCT
CACGCTGGCTGCGTTGTTGCTTCGTTGAGGATGCAGAATGCGAAATTACT
CAAATAGCTCTGTGGCAGGCATACCAGAGCCGATTTGCAGACCCCCGTGT
TCCGGGTGGTGGTGTCCTCCCTGCCGCCGAATTCATTAAGAATGTCAGCA
CGACATTCACCAATGCGCAAGCGCAGGTCATCAACGGCCCTGGCGCGGCG
ACTCGCTTTATCATCAAGGGCATCCGTCCGTTAGAAACAGCCTACACCTT
CCAGGGATTCCCCTACCAATATTGCAAATGGGCCGACAACTCGAAGCCCA
CCAAAACCTGCCAGCGCGCTTTCACTACTCCTACCGACCTGCGCAACCAT
GTTTTCGCCGACCACATGGAGCTCAAGCCTACGGACACGCCAGGCCACTA
CAATCTGGACAATGCCGAATCCCCGATTCACACGTGCCTCTGGGATAACT
GCACCCGGTTCCGTTCTTCCGGCCCCAGCAACAATACCGCCATGGTAGCG
GGTCATGTGGCATCACACCTGCCTGAAGAGCGCCCTGCTGATGCAGAACC
CCCGATCTCCAAGCGCGCTGTACTTCAAGAGCGGATCGTCCGCAAATGGT
TCTACATGGATACGCCGGTCAATGAGAGAGCCGAACCCTTCGGTGTGGCC
TACAAGGCGGCGTTGGTGCTGCGCAATATCGCCCGGAACTTACCGACCGG
CATGGCTCAGAAATACAATGGCCTCTCGTGGAAGAAAGCCGTATTCCTCA
GTCACCGGCCGAAGATTGTGGAAACGTGGGACCGTAACCGGTCGCTGCGT
AAGGAACTCACTGAGTTGATTATGATAATAGAGAAAGAGGATTACTATTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002686-T1.utr5p1 | KJC3_002686-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260WUA |
| DBxref | InterPro:IPR003150 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3294624..3297583 + |
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