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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3317058..3318726+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002694-T1 ID=KJC3_002694-T1|Name=KJC3_002694-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1669bp|location=Sequence derived from alignment at ch2:3317058..3318726+ (Aspergillus niger KJC3)
GGGCGATCGCCGGCCGCTCATTTACCGATCCTATCATCCATCAGCCAGCC
CTTCGACCCTTACTACTAATATCCTTTTCTCCGCCCCTCCCCCGTCTTTT
CTTCCTTCCATCCTTGGTGCGGAGTATCCTATCCATCTCCAGTCTGTATC
ACACCTGACCTCTCCTCTCCATCCGCTAGCCCGCCAGAGCTTCGTCTCCC
TTCTCGGTCCCCACGCCGTCCCGACACCGCGCGGAATTCGACTCCCGCCT
TTTTCTACCCTTTCAATAACTAACCGACACTTGAACCTTTCCCATCGAAC
CAACACATACTTCAGCCATCATCAACATGGTCGCAGACGCTTTAGTTTAC
CATCCCGCCTTGGCGCACTACCTGCGCTTTGTCGCAACGACCGGTACGTG
CCGGCTTTCTATCTGTCCTGCGCTGCTGGTTTCTCGGCCGGGAGAGAGCA
ATATGCCCCAATGCAGGGGAGATGTCTCTCGTGCTTCTGCAGGATACACT
TGATCACATTCCAGCATATCACTAATATCTCTCAGTCGGTCGCGATAAGA
TCCTTCGAACCCTGCAGTACTTCTCCCGCTTCTATGCTTGGTACCTCTAC
CGCACCAACCGCCCCCAGTCCGCCATCGAGCCTTTCAACGCTGTCAAGAA
GCAGTTCGGAACAACTCGGAAGATTCTGCGGATCGGCAAGTTTGTTGAGC
ATCTGAAGGCAGCCGCATTGGCCTCCGACAACAAGAACCCTATCGACCCT
GTACTCCGTTATCTCGCCGTCGGCCGTCAGCTTGGCTACGCGGGCTACCT
CTCTCTCGATACAGTCACCGTTATTGACACGATCGGTGTTCGTAAGCTTG
CTTCGGCCAAGCGACTGCAGGAGCACGCTTACCGTTCATGGATGGCGGGC
TTGGTCTGCAGCGCTGTCGCGGGCGTATACACTCTGTTCAGGTTGCGGGA
GAAGGAGAAGACCCTCGACCGCAAGGAAGGCGAAGGTGTTGTGGAGGCCA
AGAAGCTTGAGAAGTATGTGTTATGTTCTTTGGCCCAATCTACTCGCGCT
GGGTCAGTATACTAACATTGTATTTGCAGGGAGCGTTCTGCCGCACGCAT
TCAGCTCATTTCCGACCTTTGTGACCTGAGCGTGCCAGTGTCCGCCCTCG
GACTGGCATCTCTCGATGACGGCATCGTGGGTCTTGCAGGAACGGTCAGC
AGTTTGATCGGTATCTGGTCCCAGTGGCGGAAGACTGCGTAAGCTGTCGC
TACCTGGACTGCATCGTGGATATTCGATATCAACAAGGCCTTATAGATAG
TTCGTTCTGACCATCATCAAACGCCGTCTGCGTGGTTGTTGATACTAAAA
TTTGACGCGTCAGTGGATATGAGCGTACACAGACGAAGAGAGACAAATAC
TGACAGGTTGGACTAACTGAGTGTCTCATTTGCGAGGCGGTTCCCAACCA
TTTATTCTACGGATTCATGTAACTTAGAGCTTATTCCCTTTGTTTGCTTT
AGCCAAATATCATTTCCTCGGCTGCATCTGTAAATTCCCATTATACGGTT
TCGATATCGGCTGTCCATTTATTTTCATTATCCGGCTGAGCTTGATGCAT
CTCTTCCCTGCTACACTTACAGGTCCAAGCCACTGTCGGATACGTCAACT
GGCCGTGTTTCGCATGAGG back to topCoding sequence (CDS) from alignment at ch2:3317058..3318726+ >KJC3_002694-T1 ID=KJC3_002694-T1|Name=KJC3_002694-T1|organism=Aspergillus niger KJC3|type=CDS|length=2124bp|location=Sequence derived from alignment at ch2:3317058..3318726+ (Aspergillus niger KJC3)
ATGGTCGCAGACGCTTTAGTTTACCATCCCGCCTTGGCGCACTACCTGCG
CTTTGTCGCAACGACCGTCGGTCGCGATAAGATCCTTCGAACCCTGCAGT
ACTTCTCCCGCTTCTATGCTTGGTACCTCTACCGCACCAACCGCCCCCAG
TCCGCCATCGAGCCTTTCAACGCTGTCAAGAAGCAGTTCGGAACAACTCG
GAAGATTCTGCGGATCGGCAAGTTTGTTGAGCATCTGAAGGCAGCCGCAT
TGGCCTCCGACAACAAGAACCCTATCGACCCTGTACTCCGTTATCTCGCC
GTCGGCCGTCAGCTTGGCTACGCGGGCTACCTCTCTCTCGATACAGTCAC
CGTTATTGACACGATCGGTGTTCGTAAGCTTGCTTCGGCCAAGCGACTGC
AGGAGCACGCTTACCGTTCATGGATGGCGGGCTTGGTCTGCAGCGCTGTC
GCGGGCGTATACACTCTGTTCAGGTTGCGGGAGAAGGAGAAGACCCTCGA
CCGCAAGGAAGGCGAAGGTGTTGTGGAGGCCAAGAAGCTTGAGAAGGAGC
GTTCTGCCGCACGCATTCAGCTCATTTCCGACCTTTGTGACCTGAGCGTG
CCAGTGTCCGCCCTCGGACTGGCATCTCTCGATGACGGCATCGTGGGTCT
TGCAGGAACGGTCAGCAGTTTGATCGGTATCTGGTCCCAGTGGCGGAAGA
CTGCGTAAATGGTCGCAGACGCTTTAGTTTACCATCCCGCCTTGGCGCAC
TACCTGCGCTTTGTCGCAACGACCGTCGGTCGCGATAAGATCCTTCGAAC
CCTGCAGTACTTCTCCCGCTTCTATGCTTGGTACCTCTACCGCACCAACC
GCCCCCAGTCCGCCATCGAGCCTTTCAACGCTGTCAAGAAGCAGTTCGGA
ACAACTCGGAAGATTCTGCGGATCGGCAAGTTTGTTGAGCATCTGAAGGC
AGCCGCATTGGCCTCCGACAACAAGAACCCTATCGACCCTGTACTCCGTT
ATCTCGCCGTCGGCCGTCAGCTTGGCTACGCGGGCTACCTCTCTCTCGAT
ACAGTCACCGTTATTGACACGATCGGTGTTCGTAAGCTTGCTTCGGCCAA
GCGACTGCAGGAGCACGCTTACCGTTCATGGATGGCGGGCTTGGTCTGCA
GCGCTGTCGCGGGCGTATACACTCTGTTCAGGTTGCGGGAGAAGGAGAAG
ACCCTCGACCGCAAGGAAGGCGAAGGTGTTGTGGAGGCCAAGAAGCTTGA
GAAGGAGCGTTCTGCCGCACGCATTCAGCTCATTTCCGACCTTTGTGACC
TGAGCGTGCCAGTGTCCGCCCTCGGACTGGCATCTCTCGATGACGGCATC
GTGGGTCTTGCAGGAACGGTCAGCAGTTTGATCGGTATCTGGTCCCAGTG
GCGGAAGACTGCGTAAATGGTCGCAGACGCTTTAGTTTACCATCCCGCCT
TGGCGCACTACCTGCGCTTTGTCGCAACGACCGTCGGTCGCGATAAGATC
CTTCGAACCCTGCAGTACTTCTCCCGCTTCTATGCTTGGTACCTCTACCG
CACCAACCGCCCCCAGTCCGCCATCGAGCCTTTCAACGCTGTCAAGAAGC
AGTTCGGAACAACTCGGAAGATTCTGCGGATCGGCAAGTTTGTTGAGCAT
CTGAAGGCAGCCGCATTGGCCTCCGACAACAAGAACCCTATCGACCCTGT
ACTCCGTTATCTCGCCGTCGGCCGTCAGCTTGGCTACGCGGGCTACCTCT
CTCTCGATACAGTCACCGTTATTGACACGATCGGTGTTCGTAAGCTTGCT
TCGGCCAAGCGACTGCAGGAGCACGCTTACCGTTCATGGATGGCGGGCTT
GGTCTGCAGCGCTGTCGCGGGCGTATACACTCTGTTCAGGTTGCGGGAGA
AGGAGAAGACCCTCGACCGCAAGGAAGGCGAAGGTGTTGTGGAGGCCAAG
AAGCTTGAGAAGGAGCGTTCTGCCGCACGCATTCAGCTCATTTCCGACCT
TTGTGACCTGAGCGTGCCAGTGTCCGCCCTCGGACTGGCATCTCTCGATG
ACGGCATCGTGGGTCTTGCAGGAACGGTCAGCAGTTTGATCGGTATCTGG
TCCCAGTGGCGGAAGACTGCGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005779 | integral component of peroxisomal membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016559 | peroxisome fission |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002694-T1.utr5p1 | KJC3_002694-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002694-T1.utr3p1 | KJC3_002694-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG0926436T |
| DBxref | InterPro:IPR008733 |
| DBxref | PFAM:PF05648 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3317058..3318726 + |
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