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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3352507..3353469+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002708-T1 ID=KJC3_002708-T1|Name=KJC3_002708-T1|organism=Aspergillus niger KJC3|type=mRNA|length=963bp|location=Sequence derived from alignment at ch2:3352507..3353469+ (Aspergillus niger KJC3)
ATGCCCCTCATCTTCCTAACCGGCGGAAGCGGCTACCTCGGACACGCCAT
CACAACCCACGCTCTATCCAAGAACTACACCATCCACTCCCTCTCACGCA
GTCCCGAAAGCGACGCCAAAATCACCTCCCTCGGCGCCGTTCCGATCCGT
GGTGATCTCACCACACACTCCGTCCTCCGTGAGCAAAGCCAAAAAGCAGA
TATAGTCATCCACCTGGCGGACCCCATGGCAGGGAACTACAGCCTCCCAT
ACGAAGAACGCATCCGTATCGACGACGAATCAGTCACCGCCATCGCCGAG
GGATTAGTGGGTACTAACAAGCCACTTGTTGTGACCTCCGGATCATTGGT
AGTTGCTGCTACGGGAACAGAGACGGACGAGAACTCCGCACTATGGGAGG
AAGGGAAGGCGCTGAATGAGCGGATTGTCTCTGAGAGGAAGAATCTGAGG
TGGTGGGAGGAGAAAGGGGTAAGGGTTATTGTGATTCGGTTGCCGCCGTT
TGTATACGGACGGGGAGGGAGTGGGGTGGGGTTGTTCATGGGGATGTTTT
GGAATGGTGGTGATGGGGGGAAGAAGGAGGTGAAGGTTGTGAAGGAGGCG
GAGGAGGTGGTTACGTCTGCGGTGCATGTCGAGGATGCGGCCGAGTTGTA
TTTGCTTGCTGCGGAGAGGGCCGGTGCTGGGGAGGTGTTTAATGGGTGTT
CGGAGTGGGGAGTGACGTTTGGGGAGTTGGGGAGGGCCATGGCGGATGTT
TTGGGGGTTGAGGTTGGTTTGGTTGGGTTTGAGGAGGCGAAGAGGGTGTG
GGGGGAGTTCTTTGCTGGGTTTTTGAGTACGGAGAATAGGGCTTCTGGGG
GGAAGGCGATGAGGGTGTTGGGGTGGGCGCCGAAGAAGGTTGGGATTGTG
GAGGAGGTGAGGCATGGGTCGTATGTTGAGGTGGCGGAGAGGTTGAGGAA
TGGTGCTGCGTGA back to topCoding sequence (CDS) from alignment at ch2:3352507..3353469+ >KJC3_002708-T1 ID=KJC3_002708-T1|Name=KJC3_002708-T1|organism=Aspergillus niger KJC3|type=CDS|length=963bp|location=Sequence derived from alignment at ch2:3352507..3353469+ (Aspergillus niger KJC3)
ATGCCCCTCATCTTCCTAACCGGCGGAAGCGGCTACCTCGGACACGCCAT
CACAACCCACGCTCTATCCAAGAACTACACCATCCACTCCCTCTCACGCA
GTCCCGAAAGCGACGCCAAAATCACCTCCCTCGGCGCCGTTCCGATCCGT
GGTGATCTCACCACACACTCCGTCCTCCGTGAGCAAAGCCAAAAAGCAGA
TATAGTCATCCACCTGGCGGACCCCATGGCAGGGAACTACAGCCTCCCAT
ACGAAGAACGCATCCGTATCGACGACGAATCAGTCACCGCCATCGCCGAG
GGATTAGTGGGTACTAACAAGCCACTTGTTGTGACCTCCGGATCATTGGT
AGTTGCTGCTACGGGAACAGAGACGGACGAGAACTCCGCACTATGGGAGG
AAGGGAAGGCGCTGAATGAGCGGATTGTCTCTGAGAGGAAGAATCTGAGG
TGGTGGGAGGAGAAAGGGGTAAGGGTTATTGTGATTCGGTTGCCGCCGTT
TGTATACGGACGGGGAGGGAGTGGGGTGGGGTTGTTCATGGGGATGTTTT
GGAATGGTGGTGATGGGGGGAAGAAGGAGGTGAAGGTTGTGAAGGAGGCG
GAGGAGGTGGTTACGTCTGCGGTGCATGTCGAGGATGCGGCCGAGTTGTA
TTTGCTTGCTGCGGAGAGGGCCGGTGCTGGGGAGGTGTTTAATGGGTGTT
CGGAGTGGGGAGTGACGTTTGGGGAGTTGGGGAGGGCCATGGCGGATGTT
TTGGGGGTTGAGGTTGGTTTGGTTGGGTTTGAGGAGGCGAAGAGGGTGTG
GGGGGAGTTCTTTGCTGGGTTTTTGAGTACGGAGAATAGGGCTTCTGGGG
GGAAGGCGATGAGGGTGTTGGGGTGGGCGCCGAAGAAGGTTGGGATTGTG
GAGGAGGTGAGGCATGGGTCGTATGTTGAGGTGGCGGAGAGGTTGAGGAA
TGGTGCTGCGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.16 |
| Note | SMCOG1010:NAD-dependent epimerase/dehydratase |
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR001509 |
| DBxref | PFAM:PF13460 |
| DBxref | PFAM:PF01370 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3352507..3353469 + |
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