You are here

Home

KJC3_002719-T1, KJC3_002719-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002719-T1
Unique NameKJC3_002719-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3378243..3381087-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002719-T1 ID=KJC3_002719-T1|Name=KJC3_002719-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2845bp|location=Sequence derived from alignment at ch2:3378243..3381087- (Aspergillus niger KJC3)
ATGGCCGACCGCACGGCAGCGGAAATCAAGCCGAAATGCACCCCCGCGGA
GCTCATGTTGAAGGTCATTTTGACGGGGACCTTGAGCCACTACGAAACCC
GCGGGATGATTGACGACAAACGCTTAGAACACATGCTCTCTGCTGGGAAG
CAGATTCTATACAAAACACACCAGGAGAGCGACGTCAGGTACGTCGATGA
TTTCTGTCTTGGGCCAGAGTCACTGTCCAGTGGCCCACCACCATCTGTCC
GCCACCCACTTCCACTCTTGCATACTGACCATTCTCTCGTGTAACAGACA
TAATCTCGGCCTATCACCGGATATCTGGCAAGGCTTCACGGACGTACTGA
CGAAGGCGATCCCGGTCCTCGAATCCCAATCGTTTGCCTGGAAGAGCCCA
CCGACGGCGAATTACGATCATTCCTCCTCCAACCTAATAGCCTACAATTA
TTTTTCGCTAGTGAAGGACATTGAGCGTCTAAATGATCTCTGTACGATCG
CCCGTAACCTCCTTGCCACCACGAAGAAGGCGCAGAACATGGCGGCGGAG
AAAGGTTTCGATCAGAGGATCTTAGCCTTGGTAGATACTTGCGTTAGAGT
AACCGCGCGAGGGTTTGACGGGGAGACGAATGCGAGGAACGAAGAGCGCT
GGCAAAAGGTTGTCAACCTTTACAAGCGTCTCCTTATCACCTGCTTGCAG
TTCTTGCATAACTTCATCATGCACAACGAACAACGCAAGATGGTGCTATG
GTTAGATTTGTTTGGGTACCACTCAACCGGCGACTCGAACATTATCCAGC
CCAGAGAGCCCCTTGACCCCACTTGCAGTCAGCAGGAAGGCATGGCGCCC
ATCGTAAAGACGGGAGAGAGGATAGTAAATCCCCCGATAAGGGCTCTTTA
CGACCAAACAGCAGAGGATCTGCTCCTGGAAACCATCTCTAACTTTCCGA
GAGAGCCCGCCACCATCAAGGAAGAGGCAGCCATGTTGCTTCTTGCTAAC
ATCAAGGACCATATGGAGAAGCTGCTTGGACGCGATTTGACTGCCATTCA
GGAAATGGGGAAGGATCCAGAACAGGTGAAGGAGATTCGCGCCGCTCTTA
CCGCCATACTCGGAGCCAAGGTTGATGGATGGTCTGATCTTCAGGACAGG
GCTAAGGACCTACCTCCTGCTCTGCCAGAAGATGAACCGCCTCGCAAGAA
GGCGATTGTCACGATTGACCGCAGCGCAACGGCTGGATTCCCACGTGTCT
GCTGGACCGATCTTCCTGATCTCGGAGATTACGGCGCGCTCTCGGGTGGC
GACGCAACTGTCATGGAGGAAGATATGAGCATGCCACGCTCGGCACAGTC
GGCGGCAGAAACACTGCAGGAGGCTAAAGACGAGCTGATGGCTCGGTTGC
AGGAGAGCTCCCAGATTGGCGACGGTGACCAGGACTATGACACTGGTGAT
GCAGGCACGGTTGGTGACGATGACTCGCGCAGTTTGGAGGCCGTTGCAGA
CGGAAGTATGGAAGAAGAAGAGGAAGAGGATGACGAGGATGATGACGACT
ATCGCGGCCGTCCAGGCGACCAGCAGCGGGGTCTCCTGACTGATATCCCA
CTTGTGCTGGGCCCTGCAGAGATCGAGGCGCTGCCAATGATAATCCAGGC
TGGTATTGTGGATAGTTTTGGGCTAAAGGGCGGAGAGAGAAGTGGCTCGA
GGAACATGCAGGCTCTCAGATGTCACATTCTGCTCACCCAGGAGACGGGT
CGGAATCTGCTTCGCGAGCTACTGATCTTCATCGCTGCCTGGGATCTCCC
TGATGACGAACTCTACTTCAAGATGATGGTTCAGATCATGGACGCGGTTT
TGAGAAATGGTCTGATGTCTCATGCATACTCCGATTTCGGCCAACCTAAG
GATATCATTTCGCCTGCGCAGGCAGTGGTTGTCAAGATCCTCACGCACAT
CTTCCGAGCCAAATACTCTCCTGCATCTGTTACAGGATCAACGCAGTCCA
ACGGAACAGCAACTAAGAACCCGGCGCCGCTTTCAAGAGTCGACATCCTT
ACTGTCCGGTACATCTTCACAATCTTCCGCGGCAACATCATCCCCGAAAC
TTGCGCTTTGATCTATCTGCAGGGTCAAATACGAGCTGGACGGGCTTTGC
CTGAGGACTTCCCGCTGAATCTCTGGGACATGGAGCGGGTGTACGAGGGT
GTCTACCAGTTCCTCGAGTTTTTTGCTGTGCTCACGGAGAACAACGACTG
GAAGAATCTGCTGGTCAAGTGGGAAATTGTCTACGACCTGGCCACGTTGA
TCAAGGAGCTCGAAGCCAGCATTCCCAAGGGTCAGCTGAGCGCGCTCAAC
CTGGGACATAACAACCCTTCCAAGGAGCCTCAGCATACGGCTCCAGCACC
GGTTGCAGTTGAACGCCCGTACGATCCCGGCGACCCGGACCCAATTGATG
CCCCCGGCTCTCGGGCCGAATCCCCGCCAATCACCGAAGATCCGTCCGAG
TTCGAATGGCGTAACCTCAAGAAACTCGTTGTGCTTGTTTTGTCATCTCT
TGTCTGGAAGTGCCCCGAGGTGCAGGACCAAATCCGTCGCTACGGCGGTG
TCGAGACCATTCTGTCCTGCACCAACTTTGATGCGCACAATCCCTACATC
AAGGAACACGCCGTCATGTGCCTGAAGTTCCTGCTGGAGGGCAACCGCGA
GAACCAGAAGATGGTCGAGGAGCTAGAAGCACGGGAAGTGGTGAAGGATG
ACGCAGGAATGTTGGAACGCAGCGGACTGGAGGCAGTTATCGACAAGGCA
GGCAAACTGGCCATCCGCACAAAGGATGGAGCAGATAAGCGGTAG
back to top

Coding sequence (CDS) from alignment at ch2:3378243..3381087-

>KJC3_002719-T1 ID=KJC3_002719-T1|Name=KJC3_002719-T1|organism=Aspergillus niger KJC3|type=CDS|length=5472bp|location=Sequence derived from alignment at ch2:3378243..3381087- (Aspergillus niger KJC3)
ACATAATCTCGGCCTATCACCGGATATCTGGCAAGGCTTCACGGACGTAC
TGACGAAGGCGATCCCGGTCCTCGAATCCCAATCGTTTGCCTGGAAGAGC
CCACCGACGGCGAATTACGATCATTCCTCCTCCAACCTAATAGCCTACAA
TTATTTTTCGCTAGTGAAGGACATTGAGCGTCTAAATGATCTCTGTACGA
TCGCCCGTAACCTCCTTGCCACCACGAAGAAGGCGCAGAACATGGCGGCG
GAGAAAGGTTTCGATCAGAGGATCTTAGCCTTGGTAGATACTTGCGTTAG
AGTAACCGCGCGAGGGTTTGACGGGGAGACGAATGCGAGGAACGAAGAGC
GCTGGCAAAAGGTTGTCAACCTTTACAAGCGTCTCCTTATCACCTGCTTG
CAGTTCTTGCATAACTTCATCATGCACAACGAACAACGCAAGATGGTGCT
ATGGTTAGATTTGTTTGGGTACCACTCAACCGGCGACTCGAACATTATCC
AGCCCAGAGAGCCCCTTGACCCCACTTGCAGTCAGCAGGAAGGCATGGCG
CCCATCGTAAAGACGGGAGAGAGGATAGTAAATCCCCCGATAAGGGCTCT
TTACGACCAAACAGCAGAGGATCTGCTCCTGGAAACCATCTCTAACTTTC
CGAGAGAGCCCGCCACCATCAAGGAAGAGGCAGCCATGTTGCTTCTTGCT
AACATCAAGGACCATATGGAGAAGCTGCTTGGACGCGATTTGACTGCCAT
TCAGGAAATGGGGAAGGATCCAGAACAGGTGAAGGAGATTCGCGCCGCTC
TTACCGCCATACTCGGAGCCAAGGTTGATGGATGGTCTGATCTTCAGGAC
AGGGCTAAGGACCTACCTCCTGCTCTGCCAGAAGATGAACCGCCTCGCAA
GAAGGCGATTGTCACGATTGACCGCAGCGCAACGGCTGGATTCCCACGTG
TCTGCTGGACCGATCTTCCTGATCTCGGAGATTACGGCGCGCTCTCGGGT
GGCGACGCAACTGTCATGGAGGAAGATATGAGCATGCCACGCTCGGCACA
GTCGGCGGCAGAAACACTGCAGGAGGCTAAAGACGAGCTGATGGCTCGGT
TGCAGGAGAGCTCCCAGATTGGCGACGGTGACCAGGACTATGACACTGGT
GATGCAGGCACGGTTGGTGACGATGACTCGCGCAGTTTGGAGGCCGTTGC
AGACGGAAGTATGGAAGAAGAAGAGGAAGAGGATGACGAGGATGATGACG
ACTATCGCGGCCGTCCAGGCGACCAGCAGCGGGGTCTCCTGACTGATATC
CCACTTGTGCTGGGCCCTGCAGAGATCGAGGCGCTGCCAATGATAATCCA
GGCTGGTATTGTGGATAGTTTTGGGCTAAAGGGCGGAGAGAGAAGTGGCT
CGAGGAACATGCAGGCTCTCAGATGTCACATTCTGCTCACCCAGGAGACG
GGTCGGAATCTGCTTCGCGAGCTACTGATCTTCATCGCTGCCTGGGATCT
CCCTGATGACGAACTCTACTTCAAGATGATGGTTCAGATCATGGACGCGG
TTTTGAGAAATGGTCTGATGTCTCATGCATACTCCGATTTCGGCCAACCT
AAGGATATCATTTCGCCTGCGCAGGCAGTGGTTGTCAAGATCCTCACGCA
CATCTTCCGAGCCAAATACTCTCCTGCATCTGTTACAGGATCAACGCAGT
CCAACGGAACAGCAACTAAGAACCCGGCGCCGCTTTCAAGAGTCGACATC
CTTACTGTCCGGTACATCTTCACAATCTTCCGCGGCAACATCATCCCCGA
AACTTGCGCTTTGATCTATCTGCAGGGTCAAATACGAGCTGGACGGGCTT
TGCCTGAGGACTTCCCGCTGAATCTCTGGGACATGGAGCGGGTGTACGAG
GGTGTCTACCAGTTCCTCGAGTTTTTTGCTGTGCTCACGGAGAACAACGA
CTGGAAGAATCTGCTGGTCAAGTGGGAAATTGTCTACGACCTGGCCACGT
TGATCAAGGAGCTCGAAGCCAGCATTCCCAAGGGTCAGCTGAGCGCGCTC
AACCTGGGACATAACAACCCTTCCAAGGAGCCTCAGCATACGGCTCCAGC
ACCGGTTGCAGTTGAACGCCCGTACGATCCCGGCGACCCGGACCCAATTG
ATGCCCCCGGCTCTCGGGCCGAATCCCCGCCAATCACCGAAGATCCGTCC
GAGTTCGAATGGCGTAACCTCAAGAAACTCGTTGTGCTTGTTTTGTCATC
TCTTGTCTGGAAGTGCCCCGAGGTGCAGGACCAAATCCGTCGCTACGGCG
GTGTCGAGACCATTCTGTCCTGCACCAACTTTGATGCGCACAATCCCTAC
ATCAAGGAACACGCCGTCATGTGCCTGAAGTTCCTGCTGGAGGGCAACCG
CGAGAACCAGAAGATGGTCGAGGAGCTAGAAGCACGGGAAGTGGTGAAGG
ATGACGCAGGAATGTTGGAACGCAGCGGACTGGAGGCAGTTATCGACAAG
GCAGGCAAACTGGCCATCCGCACAAAGGATGGAGCAGATAAGCGGTAGAT
GGCCGACCGCACGGCAGCGGAAATCAAGCCGAAATGCACCCCCGCGGAGC
TCATGTTGAAGGTCATTTTGACGGGGACCTTGAGCCACTACGAAACCCGC
GGGATGATTGACGACAAACGCTTAGAACACATGCTCTCTGCTGGGAAGCA
GATTCTATACAAAACACACCAGGAGAGCGACGTCAGACATAATCTCGGCC
TATCACCGGATATCTGGCAAGGCTTCACGGACGTACTGACGAAGGCGATC
CCGGTCCTCGAATCCCAATCGTTTGCCTGGAAGAGCCCACCGACGGCGAA
TTACGATCATTCCTCCTCCAACCTAATAGCCTACAATTATTTTTCGCTAG
TGAAGGACATTGAGCGTCTAAATGATCTCTGTACGATCGCCCGTAACCTC
CTTGCCACCACGAAGAAGGCGCAGAACATGGCGGCGGAGAAAGGTTTCGA
TCAGAGGATCTTAGCCTTGGTAGATACTTGCGTTAGAGTAACCGCGCGAG
GGTTTGACGGGGAGACGAATGCGAGGAACGAAGAGCGCTGGCAAAAGGTT
GTCAACCTTTACAAGCGTCTCCTTATCACCTGCTTGCAGTTCTTGCATAA
CTTCATCATGCACAACGAACAACGCAAGATGGTGCTATGGTTAGATTTGT
TTGGGTACCACTCAACCGGCGACTCGAACATTATCCAGCCCAGAGAGCCC
CTTGACCCCACTTGCAGTCAGCAGGAAGGCATGGCGCCCATCGTAAAGAC
GGGAGAGAGGATAGTAAATCCCCCGATAAGGGCTCTTTACGACCAAACAG
CAGAGGATCTGCTCCTGGAAACCATCTCTAACTTTCCGAGAGAGCCCGCC
ACCATCAAGGAAGAGGCAGCCATGTTGCTTCTTGCTAACATCAAGGACCA
TATGGAGAAGCTGCTTGGACGCGATTTGACTGCCATTCAGGAAATGGGGA
AGGATCCAGAACAGGTGAAGGAGATTCGCGCCGCTCTTACCGCCATACTC
GGAGCCAAGGTTGATGGATGGTCTGATCTTCAGGACAGGGCTAAGGACCT
ACCTCCTGCTCTGCCAGAAGATGAACCGCCTCGCAAGAAGGCGATTGTCA
CGATTGACCGCAGCGCAACGGCTGGATTCCCACGTGTCTGCTGGACCGAT
CTTCCTGATCTCGGAGATTACGGCGCGCTCTCGGGTGGCGACGCAACTGT
CATGGAGGAAGATATGAGCATGCCACGCTCGGCACAGTCGGCGGCAGAAA
CACTGCAGGAGGCTAAAGACGAGCTGATGGCTCGGTTGCAGGAGAGCTCC
CAGATTGGCGACGGTGACCAGGACTATGACACTGGTGATGCAGGCACGGT
TGGTGACGATGACTCGCGCAGTTTGGAGGCCGTTGCAGACGGAAGTATGG
AAGAAGAAGAGGAAGAGGATGACGAGGATGATGACGACTATCGCGGCCGT
CCAGGCGACCAGCAGCGGGGTCTCCTGACTGATATCCCACTTGTGCTGGG
CCCTGCAGAGATCGAGGCGCTGCCAATGATAATCCAGGCTGGTATTGTGG
ATAGTTTTGGGCTAAAGGGCGGAGAGAGAAGTGGCTCGAGGAACATGCAG
GCTCTCAGATGTCACATTCTGCTCACCCAGGAGACGGGTCGGAATCTGCT
TCGCGAGCTACTGATCTTCATCGCTGCCTGGGATCTCCCTGATGACGAAC
TCTACTTCAAGATGATGGTTCAGATCATGGACGCGGTTTTGAGAAATGGT
CTGATGTCTCATGCATACTCCGATTTCGGCCAACCTAAGGATATCATTTC
GCCTGCGCAGGCAGTGGTTGTCAAGATCCTCACGCACATCTTCCGAGCCA
AATACTCTCCTGCATCTGTTACAGGATCAACGCAGTCCAACGGAACAGCA
ACTAAGAACCCGGCGCCGCTTTCAAGAGTCGACATCCTTACTGTCCGGTA
CATCTTCACAATCTTCCGCGGCAACATCATCCCCGAAACTTGCGCTTTGA
TCTATCTGCAGGGTCAAATACGAGCTGGACGGGCTTTGCCTGAGGACTTC
CCGCTGAATCTCTGGGACATGGAGCGGGTGTACGAGGGTGTCTACCAGTT
CCTCGAGTTTTTTGCTGTGCTCACGGAGAACAACGACTGGAAGAATCTGC
TGGTCAAGTGGGAAATTGTCTACGACCTGGCCACGTTGATCAAGGAGCTC
GAAGCCAGCATTCCCAAGGGTCAGCTGAGCGCGCTCAACCTGGGACATAA
CAACCCTTCCAAGGAGCCTCAGCATACGGCTCCAGCACCGGTTGCAGTTG
AACGCCCGTACGATCCCGGCGACCCGGACCCAATTGATGCCCCCGGCTCT
CGGGCCGAATCCCCGCCAATCACCGAAGATCCGTCCGAGTTCGAATGGCG
TAACCTCAAGAAACTCGTTGTGCTTGTTTTGTCATCTCTTGTCTGGAAGT
GCCCCGAGGTGCAGGACCAAATCCGTCGCTACGGCGGTGTCGAGACCATT
CTGTCCTGCACCAACTTTGATGCGCACAATCCCTACATCAAGGAACACGC
CGTCATGTGCCTGAAGTTCCTGCTGGAGGGCAACCGCGAGAACCAGAAGA
TGGTCGAGGAGCTAGAAGCACGGGAAGTGGTGAAGGATGACGCAGGAATG
TTGGAACGCAGCGGACTGGAGGCAGTTATCGACAAGGCAGGCAAACTGGC
CATCCGCACAAAGGATGGAGCAGATAAGCGGTAGATGGCCGACCGCACGG
CAGCGGAAATCAAGCCGAAATGCACCCCCGCGGAGCTCATGTTGAAGGTC
ATTTTGACGGGGACCTTGAGCCACTACGAAACCCGCGGGATGATTGACGA
CAAACGCTTAGAACACATGCTCTCTGCTGGGAAGCAGATTCTATACAAAA
CACACCAGGAGAGCGACGTCAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002719KJC3_002719Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002719-T1KJC3_002719-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002719-T1.cdsKJC3_002719-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002719-T1.exon2KJC3_002719-T1.exon2Aspergillus niger KJC3exon
KJC3_002719-T1.exon1KJC3_002719-T1.exon1Aspergillus niger KJC3exon


Properties
Property NameValue
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR011989
DBxrefInterPro:IPR019156
DBxrefPFAM:PF09759
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3378243..3381087 -
Powered by Drupal