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KJC3_002722-T1, KJC3_002722-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002722-T1
Unique NameKJC3_002722-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3384832..3386349-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002722-T1 ID=KJC3_002722-T1|Name=KJC3_002722-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1518bp|location=Sequence derived from alignment at ch2:3384832..3386349- (Aspergillus niger KJC3)
CGCTGATGTCTATTTCTTTGTCATTCAATCTGTAATTACACTAAACCGTT
GGACGATCTCTCGCGAAATCCGCCAAGCTGTTTTCCCGACTTCTCAGCCT
TGCTTCTTTCGGAACAATGCCCCGTAAGTAGCCGCAAACTAAAACAGTTA
TGCTTTTCATTGAGACAAGGTCATATTAACTTCATTTCAGCGCCGGTTCC
TGACATTTCCGATGACGAGTCGTCGAGTGGCGAGTCGATTCCCTATGACG
ATGCTCGATCAAAAAAGAAGGCGTCTAAGGATGACGATGAAGACGAGGAC
GAGGATGAGGAAGAAGAGGATGTGTAAGCTTGCGCGCGTGCGACCTAGTC
GCGAGCAAGAATTGACGTGAACAGATACATTGTTGAGAAGATTGTGAATC
ATGAATGGGCCAAAAATGTGCGCGACATTATATCTACCCGTTCAATTGAC
CAACAGGGCATGCTTTAGCTAATGATGTGGCAGGGCGACCTCCTTCTTCA
AGTCAAGTGGCAGGGCTACGATGACCCCGCTGACTTGACACTGGAGCCAG
AAGAGAATCTACTGTATGCTGCTGGATGTCGTTTCTTTCAGCTTCAACAA
AACTGATGGGTCGTTTACAGAGAAGGCGCGAAGGAAATAGTCGAGGAATA
CTTTCGAATTTTGGGAGGTCGTCCTGAAAAGCCACAACCGCAAACGAAAA
AGCGCAAGTCGATAGGGAGACCTCCAAAGTCCGCGCCCGAGAAAACCCCC
GAGCCCAAGAGACGCCGCAAGTCGCGGGCTGAAACAGCAACAGAGTCACC
CGAAAAAGAAAAAGAGAAGGCCGATGAAGGTGAAAGCGACGACACATCTA
CGTGGGTTCCTTCGTCTCGCAACTGGGAGAAGGAGGTCGATACGGTGGAA
ACAATCATACGACAACCTGGAACGTCGAATCTGCTTGCGTTTATTAGCTG
GAAGAATGGTAAAAAGTCAAAGGTCAACATAGAGATGTGCTACGACAAGT
GCCCGAAGAAGGTGAGTTATCTGGGATCCGCGGTTCTTCACCGGCGCTGA
CTTGTAGCAAGATGCTCCAATTCTATGAATCACATCTGTAAATCATCCTT
ATCCATCGCCTCATAAGACGAGCATATGCTAACCACTCTCATTAGGGTCT
TTAAGGAGGGCTAAACCTCTATTCGTTAAAGTTCGGGTTCTTTATTAATC
ATCGTCTAATTTACGACAGGCGCAATTGCAGATTAGTGTTGAAGGAGCAA
GCATATAGGGCGTTTTTGAAGTTTCACATACTGGTTCCAGATAACCTAAG
TGTAAGACAATGGCCTGGGCTAGTCTCGACATGGACTTTTCTTAGAGTCC
TCCTGTTTGAAGGGAACCAACACCGGAATATAACGGGAATGCGCCAGCTG
CTCCAGGCCTTCGCGAACTCATTCGCACCATTTCTCTTTGGATATCAATT
GTTTCCCGGATTTTTATCTTTGTGTCTCTATTTAGCGTCTTAAGATCCAT
GTACATTATCATTAGTTC
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Coding sequence (CDS) from alignment at ch2:3384832..3386349-

>KJC3_002722-T1 ID=KJC3_002722-T1|Name=KJC3_002722-T1|organism=Aspergillus niger KJC3|type=CDS|length=4893bp|location=Sequence derived from alignment at ch2:3384832..3386349- (Aspergillus niger KJC3)
GGTCTTTAAGGAGGGCTAAATGCTCCAATTCTATGAATCACATCTAGAAG
GCGCGAAGGAAATAGTCGAGGAATACTTTCGAATTTTGGGAGGTCGTCCT
GAAAAGCCACAACCGCAAACGAAAAAGCGCAAGTCGATAGGGAGACCTCC
AAAGTCCGCGCCCGAGAAAACCCCCGAGCCCAAGAGACGCCGCAAGTCGC
GGGCTGAAACAGCAACAGAGTCACCCGAAAAAGAAAAAGAGAAGGCCGAT
GAAGGTGAAAGCGACGACACATCTACGTGGGTTCCTTCGTCTCGCAACTG
GGAGAAGGAGGTCGATACGGTGGAAACAATCATACGACAACCTGGAACGT
CGAATCTGCTTGCGTTTATTAGCTGGAAGAATGGTAAAAAGTCAAAGGTC
AACATAGAGATGTGCTACGACAAGTGCCCGAAGAAGGGCGACCTCCTTCT
TCAAGTCAAGTGGCAGGGCTACGATGACCCCGCTGACTTGACACTGGAGC
CAGAAGAGAATCTACTATACATTGTTGAGAAGATTGTGAATCATGAATGG
GCCAAAAATCGCCGGTTCCTGACATTTCCGATGACGAGTCGTCGAGTGGC
GAGTCGATTCCCTATGACGATGCTCGATCAAAAAAGAAGGCGTCTAAGGA
TGACGATGAAGACGAGGACGAGGATGAGGAAGAAGAGGATGTATGCCCCG
GTCTTTAAGGAGGGCTAAATGCTCCAATTCTATGAATCACATCTAGAAGG
CGCGAAGGAAATAGTCGAGGAATACTTTCGAATTTTGGGAGGTCGTCCTG
AAAAGCCACAACCGCAAACGAAAAAGCGCAAGTCGATAGGGAGACCTCCA
AAGTCCGCGCCCGAGAAAACCCCCGAGCCCAAGAGACGCCGCAAGTCGCG
GGCTGAAACAGCAACAGAGTCACCCGAAAAAGAAAAAGAGAAGGCCGATG
AAGGTGAAAGCGACGACACATCTACGTGGGTTCCTTCGTCTCGCAACTGG
GAGAAGGAGGTCGATACGGTGGAAACAATCATACGACAACCTGGAACGTC
GAATCTGCTTGCGTTTATTAGCTGGAAGAATGGTAAAAAGTCAAAGGTCA
ACATAGAGATGTGCTACGACAAGTGCCCGAAGAAGGGCGACCTCCTTCTT
CAAGTCAAGTGGCAGGGCTACGATGACCCCGCTGACTTGACACTGGAGCC
AGAAGAGAATCTACTATACATTGTTGAGAAGATTGTGAATCATGAATGGG
CCAAAAATCGCCGGTTCCTGACATTTCCGATGACGAGTCGTCGAGTGGCG
AGTCGATTCCCTATGACGATGCTCGATCAAAAAAGAAGGCGTCTAAGGAT
GACGATGAAGACGAGGACGAGGATGAGGAAGAAGAGGATGTATGCCCCGG
TCTTTAAGGAGGGCTAAATGCTCCAATTCTATGAATCACATCTAGAAGGC
GCGAAGGAAATAGTCGAGGAATACTTTCGAATTTTGGGAGGTCGTCCTGA
AAAGCCACAACCGCAAACGAAAAAGCGCAAGTCGATAGGGAGACCTCCAA
AGTCCGCGCCCGAGAAAACCCCCGAGCCCAAGAGACGCCGCAAGTCGCGG
GCTGAAACAGCAACAGAGTCACCCGAAAAAGAAAAAGAGAAGGCCGATGA
AGGTGAAAGCGACGACACATCTACGTGGGTTCCTTCGTCTCGCAACTGGG
AGAAGGAGGTCGATACGGTGGAAACAATCATACGACAACCTGGAACGTCG
AATCTGCTTGCGTTTATTAGCTGGAAGAATGGTAAAAAGTCAAAGGTCAA
CATAGAGATGTGCTACGACAAGTGCCCGAAGAAGGGCGACCTCCTTCTTC
AAGTCAAGTGGCAGGGCTACGATGACCCCGCTGACTTGACACTGGAGCCA
GAAGAGAATCTACTATACATTGTTGAGAAGATTGTGAATCATGAATGGGC
CAAAAATCGCCGGTTCCTGACATTTCCGATGACGAGTCGTCGAGTGGCGA
GTCGATTCCCTATGACGATGCTCGATCAAAAAAGAAGGCGTCTAAGGATG
ACGATGAAGACGAGGACGAGGATGAGGAAGAAGAGGATGTATGCCCCGGT
CTTTAAGGAGGGCTAAATGCTCCAATTCTATGAATCACATCTAGAAGGCG
CGAAGGAAATAGTCGAGGAATACTTTCGAATTTTGGGAGGTCGTCCTGAA
AAGCCACAACCGCAAACGAAAAAGCGCAAGTCGATAGGGAGACCTCCAAA
GTCCGCGCCCGAGAAAACCCCCGAGCCCAAGAGACGCCGCAAGTCGCGGG
CTGAAACAGCAACAGAGTCACCCGAAAAAGAAAAAGAGAAGGCCGATGAA
GGTGAAAGCGACGACACATCTACGTGGGTTCCTTCGTCTCGCAACTGGGA
GAAGGAGGTCGATACGGTGGAAACAATCATACGACAACCTGGAACGTCGA
ATCTGCTTGCGTTTATTAGCTGGAAGAATGGTAAAAAGTCAAAGGTCAAC
ATAGAGATGTGCTACGACAAGTGCCCGAAGAAGGGCGACCTCCTTCTTCA
AGTCAAGTGGCAGGGCTACGATGACCCCGCTGACTTGACACTGGAGCCAG
AAGAGAATCTACTATACATTGTTGAGAAGATTGTGAATCATGAATGGGCC
AAAAATCGCCGGTTCCTGACATTTCCGATGACGAGTCGTCGAGTGGCGAG
TCGATTCCCTATGACGATGCTCGATCAAAAAAGAAGGCGTCTAAGGATGA
CGATGAAGACGAGGACGAGGATGAGGAAGAAGAGGATGTATGCCCCGGTC
TTTAAGGAGGGCTAAATGCTCCAATTCTATGAATCACATCTAGAAGGCGC
GAAGGAAATAGTCGAGGAATACTTTCGAATTTTGGGAGGTCGTCCTGAAA
AGCCACAACCGCAAACGAAAAAGCGCAAGTCGATAGGGAGACCTCCAAAG
TCCGCGCCCGAGAAAACCCCCGAGCCCAAGAGACGCCGCAAGTCGCGGGC
TGAAACAGCAACAGAGTCACCCGAAAAAGAAAAAGAGAAGGCCGATGAAG
GTGAAAGCGACGACACATCTACGTGGGTTCCTTCGTCTCGCAACTGGGAG
AAGGAGGTCGATACGGTGGAAACAATCATACGACAACCTGGAACGTCGAA
TCTGCTTGCGTTTATTAGCTGGAAGAATGGTAAAAAGTCAAAGGTCAACA
TAGAGATGTGCTACGACAAGTGCCCGAAGAAGGGCGACCTCCTTCTTCAA
GTCAAGTGGCAGGGCTACGATGACCCCGCTGACTTGACACTGGAGCCAGA
AGAGAATCTACTATACATTGTTGAGAAGATTGTGAATCATGAATGGGCCA
AAAATCGCCGGTTCCTGACATTTCCGATGACGAGTCGTCGAGTGGCGAGT
CGATTCCCTATGACGATGCTCGATCAAAAAAGAAGGCGTCTAAGGATGAC
GATGAAGACGAGGACGAGGATGAGGAAGAAGAGGATGTATGCCCCGGTCT
TTAAGGAGGGCTAAATGCTCCAATTCTATGAATCACATCTAGAAGGCGCG
AAGGAAATAGTCGAGGAATACTTTCGAATTTTGGGAGGTCGTCCTGAAAA
GCCACAACCGCAAACGAAAAAGCGCAAGTCGATAGGGAGACCTCCAAAGT
CCGCGCCCGAGAAAACCCCCGAGCCCAAGAGACGCCGCAAGTCGCGGGCT
GAAACAGCAACAGAGTCACCCGAAAAAGAAAAAGAGAAGGCCGATGAAGG
TGAAAGCGACGACACATCTACGTGGGTTCCTTCGTCTCGCAACTGGGAGA
AGGAGGTCGATACGGTGGAAACAATCATACGACAACCTGGAACGTCGAAT
CTGCTTGCGTTTATTAGCTGGAAGAATGGTAAAAAGTCAAAGGTCAACAT
AGAGATGTGCTACGACAAGTGCCCGAAGAAGGGCGACCTCCTTCTTCAAG
TCAAGTGGCAGGGCTACGATGACCCCGCTGACTTGACACTGGAGCCAGAA
GAGAATCTACTATACATTGTTGAGAAGATTGTGAATCATGAATGGGCCAA
AAATCGCCGGTTCCTGACATTTCCGATGACGAGTCGTCGAGTGGCGAGTC
GATTCCCTATGACGATGCTCGATCAAAAAAGAAGGCGTCTAAGGATGACG
ATGAAGACGAGGACGAGGATGAGGAAGAAGAGGATGTATGCCCCGGTCTT
TAAGGAGGGCTAAATGCTCCAATTCTATGAATCACATCTAGAAGGCGCGA
AGGAAATAGTCGAGGAATACTTTCGAATTTTGGGAGGTCGTCCTGAAAAG
CCACAACCGCAAACGAAAAAGCGCAAGTCGATAGGGAGACCTCCAAAGTC
CGCGCCCGAGAAAACCCCCGAGCCCAAGAGACGCCGCAAGTCGCGGGCTG
AAACAGCAACAGAGTCACCCGAAAAAGAAAAAGAGAAGGCCGATGAAGGT
GAAAGCGACGACACATCTACGTGGGTTCCTTCGTCTCGCAACTGGGAGAA
GGAGGTCGATACGGTGGAAACAATCATACGACAACCTGGAACGTCGAATC
TGCTTGCGTTTATTAGCTGGAAGAATGGTAAAAAGTCAAAGGTCAACATA
GAGATGTGCTACGACAAGTGCCCGAAGAAGGGCGACCTCCTTCTTCAAGT
CAAGTGGCAGGGCTACGATGACCCCGCTGACTTGACACTGGAGCCAGAAG
AGAATCTACTATACATTGTTGAGAAGATTGTGAATCATGAATGGGCCAAA
AATCGCCGGTTCCTGACATTTCCGATGACGAGTCGTCGAGTGGCGAGTCG
ATTCCCTATGACGATGCTCGATCAAAAAAGAAGGCGTCTAAGGATGACGA
TGAAGACGAGGACGAGGATGAGGAAGAAGAGGATGTATGCCCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002722KJC3_002722Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002722-T1KJC3_002722-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002722-T1.cdsKJC3_002722-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002722-T1.utr3p1KJC3_002722-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002722-T1.exon7KJC3_002722-T1.exon7Aspergillus niger KJC3exon
KJC3_002722-T1.exon6KJC3_002722-T1.exon6Aspergillus niger KJC3exon
KJC3_002722-T1.exon5KJC3_002722-T1.exon5Aspergillus niger KJC3exon
KJC3_002722-T1.exon4KJC3_002722-T1.exon4Aspergillus niger KJC3exon
KJC3_002722-T1.exon3KJC3_002722-T1.exon3Aspergillus niger KJC3exon
KJC3_002722-T1.exon2KJC3_002722-T1.exon2Aspergillus niger KJC3exon
KJC3_002722-T1.exon1KJC3_002722-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002722-T1.utr5p1KJC3_002722-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR016197
DBxrefInterPro:IPR023780
DBxrefInterPro:IPR000953
DBxrefInterPro:IPR008251
DBxrefPFAM:PF01393
DBxrefPFAM:PF00385
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3384832..3386349 -
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