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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3390141..3392259+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002724-T1 ID=KJC3_002724-T1|Name=KJC3_002724-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2119bp|location=Sequence derived from alignment at ch2:3390141..3392259+ (Aspergillus niger KJC3) CACGAGGAGGTTAAATAGCTGCGTTTGTCCTCATCACCTCGTGTTGGTTG
ATTCATTCTTCAACTTCGTCTTCTTTGTTATTATACCAATAACTACCATT
ATATATATCGGTTGCCGTGACTTTACTTCTCATCCTTCAATATATACTAA
CAGCTCCGGTATACTGTTATCAATATGGGCTCAACCGATGAATCATCGTG
GCGCCGCCTGAGCGTCGGTATCGTTGGTGGTGGTATTGGTGGTATGGCTG
CTGCCATCTCTCTTCGTCGAGCAGGTCACGATGTGACTATCTATGAGCGT
CATGATTTCGCGGGCGAGGTTGGAGCGTCGATTTCGTGCGCGGCAAATGG
CACTCGCTGGTTACACGAATGGGGGGTCGATGTTGCTAAGGGCGATCCGG
TTATTCTGCGCAAGTTGATTAACCGGGACTGGAAGACTGGAGAGCCCGTT
AGTGTGTATGATTTGGGGGACTATGAGAAGCGTTGGGGATACGTCTATAA
TATGTTTCATCGGCAGTATATGCATACTATGTTGAAGGACTGTGCTATGC
AGGAGGAAGGCCAGGGAACGCCTGCGAAGCTGAAGGTCAATTTTCAGGTT
CGTCGCGACATATGCTACCTTTTCTCTCGGTTATAGGGTCCGATTATATC
GTTGGTATGCTAACGTTGAGAAATCTTCAGTGCAAAGACATCGACCTAAG
TACCGGAGTGATCTCCTTTGCCAACGGGGAGACTGCCCGGCATGACTTGA
TCGTGGGTGCTGATGGCATCGGCTCAGTTGTCCGTGGTATTATTGGGGTT
CATCCTGAAAGAAAGCCTGCAGCCTCCAGCTGTCTGCACGCTAACGTGAC
TACGGAGGAGGCTGTTCGGCTGGGTCTGGTTGATTACTCAAAGGACAGCG
CGCTTGAGTACTGGGGTGGCCAGGAAGGCAAGTGGGATAAGATCGTGCTC
TCGCCTTGTAACGGTGGTCGCTTGCTGTCGTACTATTGTTTCTTCCCTCG
CGAGATGGGAGACTATGCGAACCACACCTGGGGAGGCGAAGACCGTCCCG
TCGAGGAACTACTCGCGCCTTATCCTCATCTCGATCGCCAGGTCCTCTCG
CATCTGGGGATTGGCAAGGAAATTAGACCATGGCGTCTCTGGGTGCAGTG
AGTACTCAACAAACGTACTCTCACGGTCGCTTGAAATTTGTTTGCGCTAA
CGGTGGGCAGCCAACCATACCCATATATCACCAGCAGCATGGTTTGTCTT
CTCGGTGATGCAGGGCACCCGGTATGTTCTGACCTACAAATTTGAACTCT
AAACAGTAACGACTAACGCATTCCACTGCAGATGATGCCCCATCAGAGTC
AGGGTGCCTGCATGGCGATTGAAGACGCTGCAGCCCTGGGCATTATCTTC
AGCAGAGCGCACTTCAAGGGCGATGTCGCCGATGCGCTGTCAATCTACCA
GGAAGTCCGACTGCCCCGGGCCACCAAGGTTCAGTCCGCTTCGGCAAAAG
CAGCATATAACATCAACGAGCGCATTGGTAAGCGAGGTCCATGATGCTGC
AGTAGTGAAGATACTGGCGCTGACGTTTTGTCCAGGTTTCTCTAGCAATA
CCGACACCGCCACCTATAAGGTTGAGGATGAGAAGAAGAAACTGACCATT
GAGGAGATGAATGCGTAAGTTTTGCAGCCCATTTGTTTCTTTCCTTGCAC
CTTTTTCCAGGTCCAGAGTCTGATAGTCAAACCAGATATGATATGCACAG
AGATATCGAGGAAGTTGTTGCCACGCGAAGGGGGCTGCCGCACACCAATA
AGTTCATCAGAGGGCTACCTGTCGGCCTGAAACTAGGGAATGGGACGGTT
GTCGGAGAACAAGAGCCTAGCTCAATTCAGCCTCGGATCTGAGTACAGCA
TGCGGCGTGCTAGTGGGGGGGTTTTTTTTGGCGCAGCATTAGTTTCGCCG
ATGGAGGCGTTCTTTCTTTTGACATTGTATTGTTTCTAGCGTGATCATGA
TCTGAGATTGTACTTGAGCAGCTGATAGCATTTATCTACTATGGGTTAGT
ATGCCACGTACGGAGCAACCTTTCGGGGCCTTCTCGAATGCGTCTTTCAC
ATCACTGGATTGACAGACC back to topCoding sequence (CDS) from alignment at ch2:3390141..3392259+ >KJC3_002724-T1 ID=KJC3_002724-T1|Name=KJC3_002724-T1|organism=Aspergillus niger KJC3|type=CDS|length=8298bp|location=Sequence derived from alignment at ch2:3390141..3392259+ (Aspergillus niger KJC3) ATGGGCTCAACCGATGAATCATCGTGGCGCCGCCTGAGCGTCGGTATCGT TGGTGGTGGTATTGGTGGTATGGCTGCTGCCATCTCTCTTCGTCGAGCAG GTCACGATGTGACTATCTATGAGCGTCATGATTTCGCGGGCGAGGTTGGA GCGTCGATTTCGTGCGCGGCAAATGGCACTCGCTGGTTACACGAATGGGG GGTCGATGTTGCTAAGGGCGATCCGGTTATTCTGCGCAAGTTGATTAACC GGGACTGGAAGACTGGAGAGCCCGTTAGTGTGTATGATTTGGGGGACTAT GAGAAGCGTTGGGGATACGTCTATAATATGTTTCATCGGCAGTATATGCA TACTATGTTGAAGGACTGTGCTATGCAGGAGGAAGGCCAGGGAACGCCTG CGAAGCTGAAGGTCAATTTTCAGTGCAAAGACATCGACCTAAGTACCGGA GTGATCTCCTTTGCCAACGGGGAGACTGCCCGGCATGACTTGATCGTGGG TGCTGATGGCATCGGCTCAGTTGTCCGTGGTATTATTGGGGTTCATCCTG AAAGAAAGCCTGCAGCCTCCAGCTGTCTGCACGCTAACGTGACTACGGAG GAGGCTGTTCGGCTGGGTCTGGTTGATTACTCAAAGGACAGCGCGCTTGA GTACTGGGGTGGCCAGGAAGGCAAGTGGGATAAGATCGTGCTCTCGCCTT GTAACGGTGGTCGCTTGCTGTCGTACTATTGTTTCTTCCCTCGCGAGATG GGAGACTATGCGAACCACACCTGGGGAGGCGAAGACCGTCCCGTCGAGGA ACTACTCGCGCCTTATCCTCATCTCGATCGCCAGGTCCTCTCGCATCTGG GGATTGGCAAGGAAATTAGACCATGGCGTCTCTGGGTGCACCAACCATAC CCATATATCACCAGCAGCATGGTTTGTCTTCTCGGTGATGCAGGGCACCC GATGATGCCCCATCAGAGTCAGGGTGCCTGCATGGCGATTGAAGACGCTG CAGCCCTGGGCATTATCTTCAGCAGAGCGCACTTCAAGGGCGATGTCGCC GATGCGCTGTCAATCTACCAGGAAGTCCGACTGCCCCGGGCCACCAAGGT TCAGTCCGCTTCGGCAAAAGCAGCATATAACATCAACGAGCGCATTGGTT TCTCTAGCAATACCGACACCGCCACCTATAAGGTTGAGGATGAGAAGAAG AAACTGACCATTGAGGAGATGAATGCATATGATATGCACAGAGATATCGA GGAAGTTGTTGCCACGCGAAGGGGGCTGCCGCACACCAATAAGTTCATCA GAGGGCTACCTGTCGGCCTGAAACTAGGGAATGGGACGGTTGTCGGAGAA CAAGAGCCTAGCTCAATTCAGCCTCGGATCTGAATGGGCTCAACCGATGA ATCATCGTGGCGCCGCCTGAGCGTCGGTATCGTTGGTGGTGGTATTGGTG GTATGGCTGCTGCCATCTCTCTTCGTCGAGCAGGTCACGATGTGACTATC TATGAGCGTCATGATTTCGCGGGCGAGGTTGGAGCGTCGATTTCGTGCGC GGCAAATGGCACTCGCTGGTTACACGAATGGGGGGTCGATGTTGCTAAGG GCGATCCGGTTATTCTGCGCAAGTTGATTAACCGGGACTGGAAGACTGGA GAGCCCGTTAGTGTGTATGATTTGGGGGACTATGAGAAGCGTTGGGGATA CGTCTATAATATGTTTCATCGGCAGTATATGCATACTATGTTGAAGGACT GTGCTATGCAGGAGGAAGGCCAGGGAACGCCTGCGAAGCTGAAGGTCAAT TTTCAGTGCAAAGACATCGACCTAAGTACCGGAGTGATCTCCTTTGCCAA CGGGGAGACTGCCCGGCATGACTTGATCGTGGGTGCTGATGGCATCGGCT CAGTTGTCCGTGGTATTATTGGGGTTCATCCTGAAAGAAAGCCTGCAGCC TCCAGCTGTCTGCACGCTAACGTGACTACGGAGGAGGCTGTTCGGCTGGG TCTGGTTGATTACTCAAAGGACAGCGCGCTTGAGTACTGGGGTGGCCAGG AAGGCAAGTGGGATAAGATCGTGCTCTCGCCTTGTAACGGTGGTCGCTTG CTGTCGTACTATTGTTTCTTCCCTCGCGAGATGGGAGACTATGCGAACCA CACCTGGGGAGGCGAAGACCGTCCCGTCGAGGAACTACTCGCGCCTTATC CTCATCTCGATCGCCAGGTCCTCTCGCATCTGGGGATTGGCAAGGAAATT AGACCATGGCGTCTCTGGGTGCACCAACCATACCCATATATCACCAGCAG CATGGTTTGTCTTCTCGGTGATGCAGGGCACCCGATGATGCCCCATCAGA GTCAGGGTGCCTGCATGGCGATTGAAGACGCTGCAGCCCTGGGCATTATC TTCAGCAGAGCGCACTTCAAGGGCGATGTCGCCGATGCGCTGTCAATCTA CCAGGAAGTCCGACTGCCCCGGGCCACCAAGGTTCAGTCCGCTTCGGCAA AAGCAGCATATAACATCAACGAGCGCATTGGTTTCTCTAGCAATACCGAC ACCGCCACCTATAAGGTTGAGGATGAGAAGAAGAAACTGACCATTGAGGA GATGAATGCATATGATATGCACAGAGATATCGAGGAAGTTGTTGCCACGC GAAGGGGGCTGCCGCACACCAATAAGTTCATCAGAGGGCTACCTGTCGGC CTGAAACTAGGGAATGGGACGGTTGTCGGAGAACAAGAGCCTAGCTCAAT TCAGCCTCGGATCTGAATGGGCTCAACCGATGAATCATCGTGGCGCCGCC TGAGCGTCGGTATCGTTGGTGGTGGTATTGGTGGTATGGCTGCTGCCATC TCTCTTCGTCGAGCAGGTCACGATGTGACTATCTATGAGCGTCATGATTT CGCGGGCGAGGTTGGAGCGTCGATTTCGTGCGCGGCAAATGGCACTCGCT GGTTACACGAATGGGGGGTCGATGTTGCTAAGGGCGATCCGGTTATTCTG CGCAAGTTGATTAACCGGGACTGGAAGACTGGAGAGCCCGTTAGTGTGTA TGATTTGGGGGACTATGAGAAGCGTTGGGGATACGTCTATAATATGTTTC ATCGGCAGTATATGCATACTATGTTGAAGGACTGTGCTATGCAGGAGGAA GGCCAGGGAACGCCTGCGAAGCTGAAGGTCAATTTTCAGTGCAAAGACAT CGACCTAAGTACCGGAGTGATCTCCTTTGCCAACGGGGAGACTGCCCGGC ATGACTTGATCGTGGGTGCTGATGGCATCGGCTCAGTTGTCCGTGGTATT ATTGGGGTTCATCCTGAAAGAAAGCCTGCAGCCTCCAGCTGTCTGCACGC TAACGTGACTACGGAGGAGGCTGTTCGGCTGGGTCTGGTTGATTACTCAA AGGACAGCGCGCTTGAGTACTGGGGTGGCCAGGAAGGCAAGTGGGATAAG ATCGTGCTCTCGCCTTGTAACGGTGGTCGCTTGCTGTCGTACTATTGTTT CTTCCCTCGCGAGATGGGAGACTATGCGAACCACACCTGGGGAGGCGAAG ACCGTCCCGTCGAGGAACTACTCGCGCCTTATCCTCATCTCGATCGCCAG GTCCTCTCGCATCTGGGGATTGGCAAGGAAATTAGACCATGGCGTCTCTG GGTGCACCAACCATACCCATATATCACCAGCAGCATGGTTTGTCTTCTCG GTGATGCAGGGCACCCGATGATGCCCCATCAGAGTCAGGGTGCCTGCATG GCGATTGAAGACGCTGCAGCCCTGGGCATTATCTTCAGCAGAGCGCACTT CAAGGGCGATGTCGCCGATGCGCTGTCAATCTACCAGGAAGTCCGACTGC CCCGGGCCACCAAGGTTCAGTCCGCTTCGGCAAAAGCAGCATATAACATC AACGAGCGCATTGGTTTCTCTAGCAATACCGACACCGCCACCTATAAGGT TGAGGATGAGAAGAAGAAACTGACCATTGAGGAGATGAATGCATATGATA TGCACAGAGATATCGAGGAAGTTGTTGCCACGCGAAGGGGGCTGCCGCAC ACCAATAAGTTCATCAGAGGGCTACCTGTCGGCCTGAAACTAGGGAATGG GACGGTTGTCGGAGAACAAGAGCCTAGCTCAATTCAGCCTCGGATCTGAA TGGGCTCAACCGATGAATCATCGTGGCGCCGCCTGAGCGTCGGTATCGTT GGTGGTGGTATTGGTGGTATGGCTGCTGCCATCTCTCTTCGTCGAGCAGG TCACGATGTGACTATCTATGAGCGTCATGATTTCGCGGGCGAGGTTGGAG CGTCGATTTCGTGCGCGGCAAATGGCACTCGCTGGTTACACGAATGGGGG GTCGATGTTGCTAAGGGCGATCCGGTTATTCTGCGCAAGTTGATTAACCG GGACTGGAAGACTGGAGAGCCCGTTAGTGTGTATGATTTGGGGGACTATG AGAAGCGTTGGGGATACGTCTATAATATGTTTCATCGGCAGTATATGCAT ACTATGTTGAAGGACTGTGCTATGCAGGAGGAAGGCCAGGGAACGCCTGC GAAGCTGAAGGTCAATTTTCAGTGCAAAGACATCGACCTAAGTACCGGAG TGATCTCCTTTGCCAACGGGGAGACTGCCCGGCATGACTTGATCGTGGGT GCTGATGGCATCGGCTCAGTTGTCCGTGGTATTATTGGGGTTCATCCTGA AAGAAAGCCTGCAGCCTCCAGCTGTCTGCACGCTAACGTGACTACGGAGG AGGCTGTTCGGCTGGGTCTGGTTGATTACTCAAAGGACAGCGCGCTTGAG TACTGGGGTGGCCAGGAAGGCAAGTGGGATAAGATCGTGCTCTCGCCTTG TAACGGTGGTCGCTTGCTGTCGTACTATTGTTTCTTCCCTCGCGAGATGG GAGACTATGCGAACCACACCTGGGGAGGCGAAGACCGTCCCGTCGAGGAA CTACTCGCGCCTTATCCTCATCTCGATCGCCAGGTCCTCTCGCATCTGGG GATTGGCAAGGAAATTAGACCATGGCGTCTCTGGGTGCACCAACCATACC CATATATCACCAGCAGCATGGTTTGTCTTCTCGGTGATGCAGGGCACCCG ATGATGCCCCATCAGAGTCAGGGTGCCTGCATGGCGATTGAAGACGCTGC AGCCCTGGGCATTATCTTCAGCAGAGCGCACTTCAAGGGCGATGTCGCCG ATGCGCTGTCAATCTACCAGGAAGTCCGACTGCCCCGGGCCACCAAGGTT CAGTCCGCTTCGGCAAAAGCAGCATATAACATCAACGAGCGCATTGGTTT CTCTAGCAATACCGACACCGCCACCTATAAGGTTGAGGATGAGAAGAAGA AACTGACCATTGAGGAGATGAATGCATATGATATGCACAGAGATATCGAG GAAGTTGTTGCCACGCGAAGGGGGCTGCCGCACACCAATAAGTTCATCAG AGGGCTACCTGTCGGCCTGAAACTAGGGAATGGGACGGTTGTCGGAGAAC AAGAGCCTAGCTCAATTCAGCCTCGGATCTGAATGGGCTCAACCGATGAA TCATCGTGGCGCCGCCTGAGCGTCGGTATCGTTGGTGGTGGTATTGGTGG TATGGCTGCTGCCATCTCTCTTCGTCGAGCAGGTCACGATGTGACTATCT ATGAGCGTCATGATTTCGCGGGCGAGGTTGGAGCGTCGATTTCGTGCGCG GCAAATGGCACTCGCTGGTTACACGAATGGGGGGTCGATGTTGCTAAGGG CGATCCGGTTATTCTGCGCAAGTTGATTAACCGGGACTGGAAGACTGGAG AGCCCGTTAGTGTGTATGATTTGGGGGACTATGAGAAGCGTTGGGGATAC GTCTATAATATGTTTCATCGGCAGTATATGCATACTATGTTGAAGGACTG TGCTATGCAGGAGGAAGGCCAGGGAACGCCTGCGAAGCTGAAGGTCAATT TTCAGTGCAAAGACATCGACCTAAGTACCGGAGTGATCTCCTTTGCCAAC GGGGAGACTGCCCGGCATGACTTGATCGTGGGTGCTGATGGCATCGGCTC AGTTGTCCGTGGTATTATTGGGGTTCATCCTGAAAGAAAGCCTGCAGCCT CCAGCTGTCTGCACGCTAACGTGACTACGGAGGAGGCTGTTCGGCTGGGT CTGGTTGATTACTCAAAGGACAGCGCGCTTGAGTACTGGGGTGGCCAGGA AGGCAAGTGGGATAAGATCGTGCTCTCGCCTTGTAACGGTGGTCGCTTGC TGTCGTACTATTGTTTCTTCCCTCGCGAGATGGGAGACTATGCGAACCAC ACCTGGGGAGGCGAAGACCGTCCCGTCGAGGAACTACTCGCGCCTTATCC TCATCTCGATCGCCAGGTCCTCTCGCATCTGGGGATTGGCAAGGAAATTA GACCATGGCGTCTCTGGGTGCACCAACCATACCCATATATCACCAGCAGC ATGGTTTGTCTTCTCGGTGATGCAGGGCACCCGATGATGCCCCATCAGAG TCAGGGTGCCTGCATGGCGATTGAAGACGCTGCAGCCCTGGGCATTATCT TCAGCAGAGCGCACTTCAAGGGCGATGTCGCCGATGCGCTGTCAATCTAC CAGGAAGTCCGACTGCCCCGGGCCACCAAGGTTCAGTCCGCTTCGGCAAA AGCAGCATATAACATCAACGAGCGCATTGGTTTCTCTAGCAATACCGACA CCGCCACCTATAAGGTTGAGGATGAGAAGAAGAAACTGACCATTGAGGAG ATGAATGCATATGATATGCACAGAGATATCGAGGAAGTTGTTGCCACGCG AAGGGGGCTGCCGCACACCAATAAGTTCATCAGAGGGCTACCTGTCGGCC TGAAACTAGGGAATGGGACGGTTGTCGGAGAACAAGAGCCTAGCTCAATT CAGCCTCGGATCTGAATGGGCTCAACCGATGAATCATCGTGGCGCCGCCT GAGCGTCGGTATCGTTGGTGGTGGTATTGGTGGTATGGCTGCTGCCATCT CTCTTCGTCGAGCAGGTCACGATGTGACTATCTATGAGCGTCATGATTTC GCGGGCGAGGTTGGAGCGTCGATTTCGTGCGCGGCAAATGGCACTCGCTG GTTACACGAATGGGGGGTCGATGTTGCTAAGGGCGATCCGGTTATTCTGC GCAAGTTGATTAACCGGGACTGGAAGACTGGAGAGCCCGTTAGTGTGTAT GATTTGGGGGACTATGAGAAGCGTTGGGGATACGTCTATAATATGTTTCA TCGGCAGTATATGCATACTATGTTGAAGGACTGTGCTATGCAGGAGGAAG GCCAGGGAACGCCTGCGAAGCTGAAGGTCAATTTTCAGTGCAAAGACATC GACCTAAGTACCGGAGTGATCTCCTTTGCCAACGGGGAGACTGCCCGGCA TGACTTGATCGTGGGTGCTGATGGCATCGGCTCAGTTGTCCGTGGTATTA TTGGGGTTCATCCTGAAAGAAAGCCTGCAGCCTCCAGCTGTCTGCACGCT AACGTGACTACGGAGGAGGCTGTTCGGCTGGGTCTGGTTGATTACTCAAA GGACAGCGCGCTTGAGTACTGGGGTGGCCAGGAAGGCAAGTGGGATAAGA TCGTGCTCTCGCCTTGTAACGGTGGTCGCTTGCTGTCGTACTATTGTTTC TTCCCTCGCGAGATGGGAGACTATGCGAACCACACCTGGGGAGGCGAAGA CCGTCCCGTCGAGGAACTACTCGCGCCTTATCCTCATCTCGATCGCCAGG TCCTCTCGCATCTGGGGATTGGCAAGGAAATTAGACCATGGCGTCTCTGG GTGCACCAACCATACCCATATATCACCAGCAGCATGGTTTGTCTTCTCGG TGATGCAGGGCACCCGATGATGCCCCATCAGAGTCAGGGTGCCTGCATGG CGATTGAAGACGCTGCAGCCCTGGGCATTATCTTCAGCAGAGCGCACTTC AAGGGCGATGTCGCCGATGCGCTGTCAATCTACCAGGAAGTCCGACTGCC CCGGGCCACCAAGGTTCAGTCCGCTTCGGCAAAAGCAGCATATAACATCA ACGAGCGCATTGGTTTCTCTAGCAATACCGACACCGCCACCTATAAGGTT GAGGATGAGAAGAAGAAACTGACCATTGAGGAGATGAATGCATATGATAT GCACAGAGATATCGAGGAAGTTGTTGCCACGCGAAGGGGGCTGCCGCACA CCAATAAGTTCATCAGAGGGCTACCTGTCGGCCTGAAACTAGGGAATGGG ACGGTTGTCGGAGAACAAGAGCCTAGCTCAATTCAGCCTCGGATCTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0071949 | FAD binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_002724-T1.utr5p1 | KJC3_002724-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_002724-T1.utr3p1 | KJC3_002724-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR002938 |
DBxref | InterPro:IPR036188 |
DBxref | PFAM:PF13450 |
DBxref | PFAM:PF01494 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch2 | supercontig | ch2:3390141..3392259 + |
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