You are here

Home

KJC3_002760-T1, KJC3_002760-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002760-T1
Unique NameKJC3_002760-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3499480..3501408+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002760-T1 ID=KJC3_002760-T1|Name=KJC3_002760-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1929bp|location=Sequence derived from alignment at ch2:3499480..3501408+ (Aspergillus niger KJC3)
ATGGATTTTCCCACTAGTCTCGACTTTTTCCCTGCAGAGCTTGTCATCTG
GATAGGTGAATTCTTGGACCGGAAGACATTGGCCGCCTTTATCCGTACAT
CGAAGCGATATGCCCAGCTCTTGACACCCCAGCTTTTAACTCTGTGGCTC
TCGTGCAAAACTGGCAAGTATTGCTTCAGGCGTAATTGGCCTGAAACACA
GCACTGGAAGTCATCTCATATAGTCGTTTTTTTCCAGAACTTCCCGTCTG
ATGTATCTCAGATCTACTGTTGCTCTACATTGCTGTTTCGGTTTGCCGAT
GGAGGTAACCTAGAGCTCGTGAAGCTCATGTTATCTAGGGGCGCAGATCT
CGAGGCAAAAGGCGCGAATGGGGAGACTCCTCTGCATATTGCTACCAGTG
GAGGACATATTCAGGTCGTGCAGGCATTGCTGGAAGCCGGGGCAGATGCC
AGTGCCAAAGACAGGTATGGAGATACACTACTGCAGAGAGCGGCATCCAT
GGGGAAGCCGGCCATGATCCGATACCTGATTAGCTCAGGACAATACACGC
TGGAAGCCCTACTGGAAGCGTTTGAACGGGGTATGAAGTGCTTCTTCCCA
AAAGTCTGTGCAGAAGTCTGTGCAGAAGTCTGGCCCGCTCTCGAAAATGC
CGGCTATAAGTTCAACGCGACTGGCACTGACGGTCAAATATACCTTCACT
TCGCCGCTAAGAGAGGACTTAGCTTTCTTGTGCAGTTCTTTCTTGATAGG
GGCCATGACCCCTTTCGCTTGGATGAAAAGGGAAATACAGCCTTGAGCAT
CGCCTGCTCAGAAGTTTTTTCTCGCTCGGAGGATATGTTAGAAACTCCGA
AGCTACTCATTAACGCAATGCAAGCCGCTGGCGGTGACCCTTTCAAAGCA
AACCGAGAGGGTGTTACTCCACTGCACAAAGCCATTCAGAAATCGCAGGT
TGATCTAGTCAGATTATTTCTCGATTCCGGAGCAAGTGTGACTGCTCGGG
GTAAGAATGGGATTAAATGCATGGAAAGAGCACTACGAGGTCCTAGAGAT
ATGTTTGAGCTGCTCGTTGACCGTGAACCCGCCTTATGGCCCACCCACAT
GCTACAATCAAGCCTTCATGGTTATACAGTCGAGTTGAAAAAAGGACAAG
GTTACCAGGATACTCCGAAGGCTATAGCAAGGATCCTGAAACTCGCCAAA
TCTGGCAAGGCAGCAATCAATGTCTCCACCAGGGACAGCTCGGGATCTAC
TCCGCTTCATAATACATGTCTGGCTAGGCACAACTCTGCTGAGGTTCCTG
GGCTCATTCGCTCTTTCATCGAAGCAGGGGCAGATATAGACATGCCAGAT
GACGAAGGCCGAACACCTCTCCACAATATACTCAGGGTATCTACTCCAAA
ATCTGAGCGGGAGATCATACAGACGATGATAAATCTCAGCAAGAATATCA
ACAAGCTGAGCAAAGCCGGTGATAGTTATTTGCATTTAGCAGCTGACGCC
AACCAGCTACGTGCTGTACAGCTGCTGTTGAGCAAAATGAGCAAGGACAC
TGTGTTCGCGGCCAATGAGTCCGGCTACACCAGTCTGCATTATGCCGCAA
TATCCGAAAATACCTCGATAATTCAGCAGATCCTAGCCACCGGTATCGAT
GTAAACGCCAAGGACCGGCATGGACGGACGGCTTTACACTACATAGACAA
CAAGCACAATGAGTCATGTGTTGCGGTACTGATCGAAGCCGGGGCAGATG
TGAATATATTGGACAATGAAGGGAGACCACCAATCCATCATGCGTCGATA
TGGGGGAAAGACGGGATGATGGAGCTTTATGTGAAAGGGGGAGCTTCTGA
GCACGAAGGCTGCGATTCTTGCAACAGAAACATCAAATCAACCAGGGAGT
GGCTAAAGGAAGTTGGCTGTTTAATTTGA
back to top

Coding sequence (CDS) from alignment at ch2:3499480..3501408+

>KJC3_002760-T1 ID=KJC3_002760-T1|Name=KJC3_002760-T1|organism=Aspergillus niger KJC3|type=CDS|length=1929bp|location=Sequence derived from alignment at ch2:3499480..3501408+ (Aspergillus niger KJC3)
ATGGATTTTCCCACTAGTCTCGACTTTTTCCCTGCAGAGCTTGTCATCTG
GATAGGTGAATTCTTGGACCGGAAGACATTGGCCGCCTTTATCCGTACAT
CGAAGCGATATGCCCAGCTCTTGACACCCCAGCTTTTAACTCTGTGGCTC
TCGTGCAAAACTGGCAAGTATTGCTTCAGGCGTAATTGGCCTGAAACACA
GCACTGGAAGTCATCTCATATAGTCGTTTTTTTCCAGAACTTCCCGTCTG
ATGTATCTCAGATCTACTGTTGCTCTACATTGCTGTTTCGGTTTGCCGAT
GGAGGTAACCTAGAGCTCGTGAAGCTCATGTTATCTAGGGGCGCAGATCT
CGAGGCAAAAGGCGCGAATGGGGAGACTCCTCTGCATATTGCTACCAGTG
GAGGACATATTCAGGTCGTGCAGGCATTGCTGGAAGCCGGGGCAGATGCC
AGTGCCAAAGACAGGTATGGAGATACACTACTGCAGAGAGCGGCATCCAT
GGGGAAGCCGGCCATGATCCGATACCTGATTAGCTCAGGACAATACACGC
TGGAAGCCCTACTGGAAGCGTTTGAACGGGGTATGAAGTGCTTCTTCCCA
AAAGTCTGTGCAGAAGTCTGTGCAGAAGTCTGGCCCGCTCTCGAAAATGC
CGGCTATAAGTTCAACGCGACTGGCACTGACGGTCAAATATACCTTCACT
TCGCCGCTAAGAGAGGACTTAGCTTTCTTGTGCAGTTCTTTCTTGATAGG
GGCCATGACCCCTTTCGCTTGGATGAAAAGGGAAATACAGCCTTGAGCAT
CGCCTGCTCAGAAGTTTTTTCTCGCTCGGAGGATATGTTAGAAACTCCGA
AGCTACTCATTAACGCAATGCAAGCCGCTGGCGGTGACCCTTTCAAAGCA
AACCGAGAGGGTGTTACTCCACTGCACAAAGCCATTCAGAAATCGCAGGT
TGATCTAGTCAGATTATTTCTCGATTCCGGAGCAAGTGTGACTGCTCGGG
GTAAGAATGGGATTAAATGCATGGAAAGAGCACTACGAGGTCCTAGAGAT
ATGTTTGAGCTGCTCGTTGACCGTGAACCCGCCTTATGGCCCACCCACAT
GCTACAATCAAGCCTTCATGGTTATACAGTCGAGTTGAAAAAAGGACAAG
GTTACCAGGATACTCCGAAGGCTATAGCAAGGATCCTGAAACTCGCCAAA
TCTGGCAAGGCAGCAATCAATGTCTCCACCAGGGACAGCTCGGGATCTAC
TCCGCTTCATAATACATGTCTGGCTAGGCACAACTCTGCTGAGGTTCCTG
GGCTCATTCGCTCTTTCATCGAAGCAGGGGCAGATATAGACATGCCAGAT
GACGAAGGCCGAACACCTCTCCACAATATACTCAGGGTATCTACTCCAAA
ATCTGAGCGGGAGATCATACAGACGATGATAAATCTCAGCAAGAATATCA
ACAAGCTGAGCAAAGCCGGTGATAGTTATTTGCATTTAGCAGCTGACGCC
AACCAGCTACGTGCTGTACAGCTGCTGTTGAGCAAAATGAGCAAGGACAC
TGTGTTCGCGGCCAATGAGTCCGGCTACACCAGTCTGCATTATGCCGCAA
TATCCGAAAATACCTCGATAATTCAGCAGATCCTAGCCACCGGTATCGAT
GTAAACGCCAAGGACCGGCATGGACGGACGGCTTTACACTACATAGACAA
CAAGCACAATGAGTCATGTGTTGCGGTACTGATCGAAGCCGGGGCAGATG
TGAATATATTGGACAATGAAGGGAGACCACCAATCCATCATGCGTCGATA
TGGGGGAAAGACGGGATGATGGAGCTTTATGTGAAAGGGGGAGCTTCTGA
GCACGAAGGCTGCGATTCTTGCAACAGAAACATCAAATCAACCAGGGAGT
GGCTAAAGGAAGTTGGCTGTTTAATTTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002760KJC3_002760Aspergillus niger KJC3gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002760-T1.exon1KJC3_002760-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002760-T1.cdsKJC3_002760-T1.cdsAspergillus niger KJC3CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002760-T1KJC3_002760-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3499480..3501408 +
Powered by Drupal