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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3513082..3514034+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002762-T1 ID=KJC3_002762-T1|Name=KJC3_002762-T1|organism=Aspergillus niger KJC3|type=mRNA|length=953bp|location=Sequence derived from alignment at ch2:3513082..3514034+ (Aspergillus niger KJC3)
ATCCCCTCACCCACTTCGCCAACCCCTCAACGCCAACCACAACCCCAAAA
ACTATCTACAATGGACATCGACGACATCCTCGCCTCCGTCGACCGCACGG
CAGACACATCCACCCCGGAGTCCACCGCCCTCGACCACCAATTACTCACG
CGCTTCTGGGTCGCCGAGCGCGCCGTCCCAGAGCTCCTCCCATGGCCGGC
GTCCTTAATGGAGCGCATGATGGAGCGCGTCAGACGACAGGTACTCCCAC
TCCCCTCCTCCTCCCAGATCGCCTCTTCTTTCCTTCCACCCCCACAATCA
AACTAGCCTATGTACTTATACGAATGATGTAGATCGAATCCATCGAAGAT
CTCGCCGCCTCCTCCACCGACCCCTTGCAAACAGCGAACGCCGCAACAAC
CAATCTCAAACTCTCCATCCTGCAATCCGACCTCTCCCGAACGCAATACC
TAATCCGCTCTCTGCTCCGCCAACGTCTTTCAAAGCTCACGGCGCATAGC
ATGCACTATTTACTTCTTATATCCCGCCCCGCCTCCCAACCTCAGTCACA
ATCGCAAACAGATTCCTCTAGACCGGAGGACTCCATCCCCGAACCCCCGG
ATACAGAAGAGGATGAGGATACATCTCCGCTGTCGAAGGAGGAAGTAACC
TTCCTGCATGCGCATCAGACATTACTTGCTGGACATTACGGTTCGTCGTT
CTTGAATTCTTTCCCGCCGCAGCTGCGCAGGTTGGATGATAATGCGGGCG
GGACTAGTATGGTGCAGGGGCCGGATGGGAAGGAGGTGGTTTTTGTGAGG
TGTCTGGTCGAGGAGAGTAGGGTTGTGGTGCCGCCTGGCGATGGGGTGGA
GGTGGAGGTTGAGGGCACGGTGTTGAGGATGGGCGAGGTTTGGGCGGTTA
GGTGGGAGGGGGTTAAAGGGGCTTGGGGGAGGGGGGAGGTTGAGGTACTG
TGA back to topCoding sequence (CDS) from alignment at ch2:3513082..3514034+ >KJC3_002762-T1 ID=KJC3_002762-T1|Name=KJC3_002762-T1|organism=Aspergillus niger KJC3|type=CDS|length=1602bp|location=Sequence derived from alignment at ch2:3513082..3514034+ (Aspergillus niger KJC3)
ATGGACATCGACGACATCCTCGCCTCCGTCGACCGCACGGCAGACACATC
CACCCCGGAGTCCACCGCCCTCGACCACCAATTACTCACGCGCTTCTGGG
TCGCCGAGCGCGCCGTCCCAGAGCTCCTCCCATGGCCGGCGTCCTTAATG
GAGCGCATGATGGAGCGCGTCAGACGACAGATCGAATCCATCGAAGATCT
CGCCGCCTCCTCCACCGACCCCTTGCAAACAGCGAACGCCGCAACAACCA
ATCTCAAACTCTCCATCCTGCAATCCGACCTCTCCCGAACGCAATACCTA
ATCCGCTCTCTGCTCCGCCAACGTCTTTCAAAGCTCACGGCGCATAGCAT
GCACTATTTACTTCTTATATCCCGCCCCGCCTCCCAACCTCAGTCACAAT
CGCAAACAGATTCCTCTAGACCGGAGGACTCCATCCCCGAACCCCCGGAT
ACAGAAGAGGATGAGGATACATCTCCGCTGTCGAAGGAGGAAGTAACCTT
CCTGCATGCGCATCAGACATTACTTGCTGGACATTACGGTTCGTCGTTCT
TGAATTCTTTCCCGCCGCAGCTGCGCAGGTTGGATGATAATGCGGGCGGG
ACTAGTATGGTGCAGGGGCCGGATGGGAAGGAGGTGGTTTTTGTGAGGTG
TCTGGTCGAGGAGAGTAGGGTTGTGGTGCCGCCTGGCGATGGGGTGGAGG
TGGAGGTTGAGGGCACGGTGTTGAGGATGGGCGAGGTTTGGGCGGTTAGG
TGGGAGGGGGTTAAAGGGGCTTGGGGGAGGGGGGAGGTTGAGGTACTGTG
AATGGACATCGACGACATCCTCGCCTCCGTCGACCGCACGGCAGACACAT
CCACCCCGGAGTCCACCGCCCTCGACCACCAATTACTCACGCGCTTCTGG
GTCGCCGAGCGCGCCGTCCCAGAGCTCCTCCCATGGCCGGCGTCCTTAAT
GGAGCGCATGATGGAGCGCGTCAGACGACAGATCGAATCCATCGAAGATC
TCGCCGCCTCCTCCACCGACCCCTTGCAAACAGCGAACGCCGCAACAACC
AATCTCAAACTCTCCATCCTGCAATCCGACCTCTCCCGAACGCAATACCT
AATCCGCTCTCTGCTCCGCCAACGTCTTTCAAAGCTCACGGCGCATAGCA
TGCACTATTTACTTCTTATATCCCGCCCCGCCTCCCAACCTCAGTCACAA
TCGCAAACAGATTCCTCTAGACCGGAGGACTCCATCCCCGAACCCCCGGA
TACAGAAGAGGATGAGGATACATCTCCGCTGTCGAAGGAGGAAGTAACCT
TCCTGCATGCGCATCAGACATTACTTGCTGGACATTACGGTTCGTCGTTC
TTGAATTCTTTCCCGCCGCAGCTGCGCAGGTTGGATGATAATGCGGGCGG
GACTAGTATGGTGCAGGGGCCGGATGGGAAGGAGGTGGTTTTTGTGAGGT
GTCTGGTCGAGGAGAGTAGGGTTGTGGTGCCGCCTGGCGATGGGGTGGAG
GTGGAGGTTGAGGGCACGGTGTTGAGGATGGGCGAGGTTTGGGCGGTTAG
GTGGGAGGGGGTTAAAGGGGCTTGGGGGAGGGGGGAGGTTGAGGTACTGT
GA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006261 | DNA-dependent DNA replication |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002762-T1.utr5p1 | KJC3_002762-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264VZ7 |
| DBxref | InterPro:IPR036224 |
| DBxref | InterPro:IPR038749 |
| DBxref | InterPro:IPR031633 |
| DBxref | InterPro:IPR021151 |
| DBxref | InterPro:IPR008591 |
| DBxref | PFAM:PF16922 |
| DBxref | PFAM:PF05916 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3513082..3514034 + |
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