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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3526700..3528745+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002766-T1 ID=KJC3_002766-T1|Name=KJC3_002766-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2046bp|location=Sequence derived from alignment at ch2:3526700..3528745+ (Aspergillus niger KJC3)
AGCTGCAAACGCGCATTGGCATACATTTTTCATTATCTTTTGACTTCTAC
CAGAAGGCTCTTTATCATATCTTGACTTTTACATATTTCAGTTGCAGCTA
CAGACACAATCCCGACATCACACCCTAATATGTTAAAGCTGCTTCTTGCA
TCATAGTACTAGTATCCAGTGATATTCCCCTACTCCATAATGGCGTCGAA
GATGTAAGTCTAGCTCAACTCACTTTTCAAAGTACTTCACTAACTCCTTC
CCAGAGTCGTCATCGGAGACGTCAACTGCGAACTGCAAGACGTCTTCACC
AAGCTCTCCAAGCTGCATATCAAGCAGAACTTCTCCTTCGCCATCATCGT
CGGCGACCTATTCGGCGACTGCTCCACAGAGCACGAACTCGAGCAGATCA
GCGCTCTGCTCCAAGGCAACATCGTCGTGCCTCTTCCCACCTACTTCACC
CTGGGTAGCAGTCCTCTCCCCACGCGCATCATCGAGGCCATCGAATCCAA
AGACGAAGTCTGCCCTAATCTCTACTTCCTGGGTCGTCGCGGCACCCTCA
AGACCTCCGAAGGCGTGCGTCTCGTCTCCTTAGGAGGCACTCTCGACCCC
GACTCCAAATCCTCCGAAAAATACCACCCCTCTTACACCGAATCCGACGC
GCGCGCCCTCTACGGCGCCCACCAAGCCGACATCCTTATCACCCACCAAT
GGCCCAAGGACATCCGCGTCGGCTCCAAAGCCCCCTTCCCCGACACCGAC
ACCCCCCCAACCGAAGTCCAATGCGTCGCCGACCTCTGCTCAACCCTTAA
ACCGCGATACCACCTCTCCTCCTCCAGCGCCTTCTTCTGGGAGCGCGAAC
CCTTCTTCCACCTCCCCACCGAGGACACCGACAACCCCGACGCCAAACCC
CTCACCCGCTTCATCAGTCTGGCCGCATACAGCAAAACCACCAAAACCAA
ATGGATGTACGCCTTCACCCTCGACCCCAAGGCACCGCCAGCCCTCACCA
TCCCCGCCGGCACAACCGCACCCCCCTTCGCTCCCATCCCCACGAAACGC
AAACCCCTCCAATCCCAACGCGACTCCTACCACCGCTTCGCCGTTGACGA
CGATCACGACAACCGCCCGCGCAAAAGACGCGCTCGCGCGCCCCCTCCAG
GCCCAGACCAATGCTTCTTCTGCCTCTCCAACCCCAACATCGCAACCCAC
CTCATCACCTCCATCGGCGACGAAGCCTACCTCACCACCGCAAAGGGTCC
CCTGCCCACCTCCAAAACCTATCCCTCACTCAAGTTTCCCTCCCACATGC
TCATAATCCCCTTCTCCCACTCCCCCACTCTCTCCAGCATCTCAGACCCC
ACATCCAGACAATCCACCTACGCCGAAATGCACCGCTACCGCTCCGCCCT
GCACTCCATGCTGCGCCACCGCGCAAACAATTCCCTGGGCGCAGTAACAT
GGGAAGTCTCCCGCGGAAACGGAATCCACATTCACTGGCAATTCCTCCCT
GTCCCTGCTGATCTCGTGCGCCGGGGCCTCGTCGACGCGGCGTTCAAGGT
CGAGGCTGAGAATCTGAAGTATCCAAGATTCGAATCCCAATCTCAACCTA
ATGACGGTGATGAGAGCGCGGAACCGGGTGACTTCTTCCGCGTGTGGATT
TGGGAGCCTCCGCAGCAGGCTGCTGCTTCAGACACTGAAACTGGAGCTGA
GGCTCAGCCTGAGAATAAGGAAGAGGACGGTAACAAAGGAAGTGAGAAAA
CGCTCCTCCTGCCACTTAGTCCGGACTTCCGGTTCGATTTGCAGTTCGGA
CGCAGAGTCATGGCCAAGTTGATGGGGTTGGAGAAGCGCATTAATTGGAA
GGATGATGTGCAGTCTGTTCAGGAGGAGGAGGCGGATGCGGTGGCGTTTA
AGGAAGCTTTTAAGGAGTGGGATTTTACGCTGGAGTAGTTATTCCCTAGG
ATATTCTATATTGGGATGAGATATTCTGGGTATGTTGATTTGGGTTTTTG
TAGTCAGTGTACTAATGTATTATATGAATGAAAATATTTGCTGAAG back to topCoding sequence (CDS) from alignment at ch2:3526700..3528745+ >KJC3_002766-T1 ID=KJC3_002766-T1|Name=KJC3_002766-T1|organism=Aspergillus niger KJC3|type=CDS|length=3396bp|location=Sequence derived from alignment at ch2:3526700..3528745+ (Aspergillus niger KJC3)
ATGGCGTCGAAGATAGTCGTCATCGGAGACGTCAACTGCGAACTGCAAGA
CGTCTTCACCAAGCTCTCCAAGCTGCATATCAAGCAGAACTTCTCCTTCG
CCATCATCGTCGGCGACCTATTCGGCGACTGCTCCACAGAGCACGAACTC
GAGCAGATCAGCGCTCTGCTCCAAGGCAACATCGTCGTGCCTCTTCCCAC
CTACTTCACCCTGGGTAGCAGTCCTCTCCCCACGCGCATCATCGAGGCCA
TCGAATCCAAAGACGAAGTCTGCCCTAATCTCTACTTCCTGGGTCGTCGC
GGCACCCTCAAGACCTCCGAAGGCGTGCGTCTCGTCTCCTTAGGAGGCAC
TCTCGACCCCGACTCCAAATCCTCCGAAAAATACCACCCCTCTTACACCG
AATCCGACGCGCGCGCCCTCTACGGCGCCCACCAAGCCGACATCCTTATC
ACCCACCAATGGCCCAAGGACATCCGCGTCGGCTCCAAAGCCCCCTTCCC
CGACACCGACACCCCCCCAACCGAAGTCCAATGCGTCGCCGACCTCTGCT
CAACCCTTAAACCGCGATACCACCTCTCCTCCTCCAGCGCCTTCTTCTGG
GAGCGCGAACCCTTCTTCCACCTCCCCACCGAGGACACCGACAACCCCGA
CGCCAAACCCCTCACCCGCTTCATCAGTCTGGCCGCATACAGCAAAACCA
CCAAAACCAAATGGATGTACGCCTTCACCCTCGACCCCAAGGCACCGCCA
GCCCTCACCATCCCCGCCGGCACAACCGCACCCCCCTTCGCTCCCATCCC
CACGAAACGCAAACCCCTCCAATCCCAACGCGACTCCTACCACCGCTTCG
CCGTTGACGACGATCACGACAACCGCCCGCGCAAAAGACGCGCTCGCGCG
CCCCCTCCAGGCCCAGACCAATGCTTCTTCTGCCTCTCCAACCCCAACAT
CGCAACCCACCTCATCACCTCCATCGGCGACGAAGCCTACCTCACCACCG
CAAAGGGTCCCCTGCCCACCTCCAAAACCTATCCCTCACTCAAGTTTCCC
TCCCACATGCTCATAATCCCCTTCTCCCACTCCCCCACTCTCTCCAGCAT
CTCAGACCCCACATCCAGACAATCCACCTACGCCGAAATGCACCGCTACC
GCTCCGCCCTGCACTCCATGCTGCGCCACCGCGCAAACAATTCCCTGGGC
GCAGTAACATGGGAAGTCTCCCGCGGAAACGGAATCCACATTCACTGGCA
ATTCCTCCCTGTCCCTGCTGATCTCGTGCGCCGGGGCCTCGTCGACGCGG
CGTTCAAGGTCGAGGCTGAGAATCTGAAGTATCCAAGATTCGAATCCCAA
TCTCAACCTAATGACGGTGATGAGAGCGCGGAACCGGGTGACTTCTTCCG
CGTGTGGATTTGGGAGCCTCCGCAGCAGGCTGCTGCTTCAGACACTGAAA
CTGGAGCTGAGGCTCAGCCTGAGAATAAGGAAGAGGACGGTAACAAAGGA
AGTGAGAAAACGCTCCTCCTGCCACTTAGTCCGGACTTCCGGTTCGATTT
GCAGTTCGGACGCAGAGTCATGGCCAAGTTGATGGGGTTGGAGAAGCGCA
TTAATTGGAAGGATGATGTGCAGTCTGTTCAGGAGGAGGAGGCGGATGCG
GTGGCGTTTAAGGAAGCTTTTAAGGAGTGGGATTTTACGCTGGAGTAGAT
GGCGTCGAAGATAGTCGTCATCGGAGACGTCAACTGCGAACTGCAAGACG
TCTTCACCAAGCTCTCCAAGCTGCATATCAAGCAGAACTTCTCCTTCGCC
ATCATCGTCGGCGACCTATTCGGCGACTGCTCCACAGAGCACGAACTCGA
GCAGATCAGCGCTCTGCTCCAAGGCAACATCGTCGTGCCTCTTCCCACCT
ACTTCACCCTGGGTAGCAGTCCTCTCCCCACGCGCATCATCGAGGCCATC
GAATCCAAAGACGAAGTCTGCCCTAATCTCTACTTCCTGGGTCGTCGCGG
CACCCTCAAGACCTCCGAAGGCGTGCGTCTCGTCTCCTTAGGAGGCACTC
TCGACCCCGACTCCAAATCCTCCGAAAAATACCACCCCTCTTACACCGAA
TCCGACGCGCGCGCCCTCTACGGCGCCCACCAAGCCGACATCCTTATCAC
CCACCAATGGCCCAAGGACATCCGCGTCGGCTCCAAAGCCCCCTTCCCCG
ACACCGACACCCCCCCAACCGAAGTCCAATGCGTCGCCGACCTCTGCTCA
ACCCTTAAACCGCGATACCACCTCTCCTCCTCCAGCGCCTTCTTCTGGGA
GCGCGAACCCTTCTTCCACCTCCCCACCGAGGACACCGACAACCCCGACG
CCAAACCCCTCACCCGCTTCATCAGTCTGGCCGCATACAGCAAAACCACC
AAAACCAAATGGATGTACGCCTTCACCCTCGACCCCAAGGCACCGCCAGC
CCTCACCATCCCCGCCGGCACAACCGCACCCCCCTTCGCTCCCATCCCCA
CGAAACGCAAACCCCTCCAATCCCAACGCGACTCCTACCACCGCTTCGCC
GTTGACGACGATCACGACAACCGCCCGCGCAAAAGACGCGCTCGCGCGCC
CCCTCCAGGCCCAGACCAATGCTTCTTCTGCCTCTCCAACCCCAACATCG
CAACCCACCTCATCACCTCCATCGGCGACGAAGCCTACCTCACCACCGCA
AAGGGTCCCCTGCCCACCTCCAAAACCTATCCCTCACTCAAGTTTCCCTC
CCACATGCTCATAATCCCCTTCTCCCACTCCCCCACTCTCTCCAGCATCT
CAGACCCCACATCCAGACAATCCACCTACGCCGAAATGCACCGCTACCGC
TCCGCCCTGCACTCCATGCTGCGCCACCGCGCAAACAATTCCCTGGGCGC
AGTAACATGGGAAGTCTCCCGCGGAAACGGAATCCACATTCACTGGCAAT
TCCTCCCTGTCCCTGCTGATCTCGTGCGCCGGGGCCTCGTCGACGCGGCG
TTCAAGGTCGAGGCTGAGAATCTGAAGTATCCAAGATTCGAATCCCAATC
TCAACCTAATGACGGTGATGAGAGCGCGGAACCGGGTGACTTCTTCCGCG
TGTGGATTTGGGAGCCTCCGCAGCAGGCTGCTGCTTCAGACACTGAAACT
GGAGCTGAGGCTCAGCCTGAGAATAAGGAAGAGGACGGTAACAAAGGAAG
TGAGAAAACGCTCCTCCTGCCACTTAGTCCGGACTTCCGGTTCGATTTGC
AGTTCGGACGCAGAGTCATGGCCAAGTTGATGGGGTTGGAGAAGCGCATT
AATTGGAAGGATGATGTGCAGTCTGTTCAGGAGGAGGAGGCGGATGCGGT
GGCGTTTAAGGAAGCTTTTAAGGAGTGGGATTTTACGCTGGAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002766-T1.utr5p1 | KJC3_002766-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002766-T1.utr3p1 | KJC3_002766-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262HKC |
| DBxref | InterPro:IPR006768 |
| DBxref | InterPro:IPR006767 |
| DBxref | PFAM:PF04676 |
| DBxref | PFAM:PF04677 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3526700..3528745 + |
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