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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3556012..3558094+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002776-T1 ID=KJC3_002776-T1|Name=KJC3_002776-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2083bp|location=Sequence derived from alignment at ch2:3556012..3558094+ (Aspergillus niger KJC3)
CAATGTGACTTCATCCCCCACGGAATTGAACCACAACCTCATCATTTCTA
CGTACTGAAGTTGAAGCTGCAGCAGATCCTCTTCTCTTACAAGTTTAGTG
AGCCAAGTCTACTACTACCATCGATCATGTGCATCGCTCAACGACAAGCG
CTAATTCGGGCGCACGCTTATCACCCTAGCAGCATAATAATGCCTTGATT
AGGCTACTATCTCTTCCATCAGTTGCATTTACGTTCATTCACCACATACA
TACATACATTTATCGCCTCATTAAATACTACGTCTCACACCAAAAATGGC
GAACGCTTCGACCGAAACCCGGGTCCTCTACGGCATCGTGGACATGGGCA
GGTATACAAACCCCTCAACACACATTCCTCTCCCCACTATAACTACCACA
AAGCTATATATTGAAAACACCTAACTAACAAACAACCAACCAACCAACAG
CAATGGCATACGATTCTCGATAACAGACCTCTCCCCCCATGCCGCGCGCC
TCATGCCCATCCTATTCCAAGACCGAGCCGGCATCTCGCTCTACGACGCG
CAATTCTCCGGCCCCACGCGGGGCCCAATCTCACCCCCCACCACCGGGGA
AGTCATCCACCGACTGGCCCAATTTCAACTCACCTGCGACGATTTCCAAG
TACCCAAGGAGAACATCTACGTCCTAGCTACAGAGGCGACCAGGACGGCC
TCAAACTCTGAAGAATTCAGAGCGCGAATCAAAGAATATACCGGGTGGGA
AGTCACTCTCCTCTCGAAGGAAGATGAAGGGAGGATAGGGGCATTAGGGA
TCGCGAGCAGCTCTGCCTCCGTGGCAGGTATCGCCATGGATCTAGGGGGC
GGAAGCACCCAGATCACATGGGTGATGGAGTCAGAGGGCACTGTTACGAC
GAGTCCGAAGGGCTCGTTCAGTTTCCCGTATGGAGCCGCGGCGTTGACGA
AACGGTTAGAGGAGGCACAGAAACAAGGGAAAGATGCTGTGAAAGAGCTC
AAGAGTGAGATGACTCGGAATATCCAGGACGCGTATCGCCAGCTGGATGT
CCCCAACGCGCTGGTAGAGATGGCCCGCAGGCGAGGCAGGTTCGATCTAT
ATCTCTGCGGCGGGGGATTCCGCGGCTGGGGGTACGTACTGATGAAGCAG
AGCAAAGTGAACCCGTACCCGATCCCCATAATCAACGGATTCCGCGTCAA
GAGAGAAGACTTCCACGATACAGTCTCAGTCCTGGAAGTGATTTCCGATT
CCGACGAGAAGATCTTCGGCGTATCAGAACGCCGCGCCTCCCAGATCCCC
GCCGTGGCCGTTCTCGTGGACGTGATCATGGACGCATTACCGGAGATCAC
TCACATCCAGTTCTGCCAGGGCGGCGTTCGCGAAGGATACTTATTCGACC
GACTATCCAGCGAAGTGCGAGCCCAGGACCCCCTCCTCGCAGCAACAGTG
CCATACGCACCCCCCTCAGCAAACGCAATCAGAGACCTCCTCCAATCAGC
ACTACCCACTTCACCTTCACCCATCGCCTCAATCCACCCTCCCCCATCCT
TCACCCCGAACCTAATCGCAGCCATAACTAACCTCCTCTACGCCCACTCC
CAAGTCCCCCGTGAATCCCGCTCCGCCGCAGCCCTCCACAGCACGACGAC
GGGCCTCCTCTCCTCCACGAACTGTCTCTCCCATGTCGAACGAGCCCTCA
TTGCCCTTGTGCTTTGTGAGCGCTGGACTGAAGACCTAGCGCCCATGGAC
CAGGCGTACCATAAGCAACTGAGTCGGTGTCTCACGGCGCAGGAGGTATG
GTGGGCTCGGTATCTGGGGAGAGTAGCTGTTCTGGTCGGGGACGTGTATC
CTGCTGGGAGGGTGGAGGGCCAGTGGCGGATCCGGATTGAGACGCAGTGG
GAGGAGATCGAGAAGAAGGAACGGCGTGATTTGTTGAGGGTGAATGTGTG
GAAGAATGTGAGGTTTTTTGAAGTGCTAGAGGAGGATAGGTTGCGGGAGA
GGACGGAGAAGGTTGAGAAGGTTGGGAAGAGGAAGAAGTGGGTAAGCGAG
TATGGGGTCAAGGTTAAGGTGAGTATTCTCTAG back to topCoding sequence (CDS) from alignment at ch2:3556012..3558094+ >KJC3_002776-T1 ID=KJC3_002776-T1|Name=KJC3_002776-T1|organism=Aspergillus niger KJC3|type=CDS|length=3378bp|location=Sequence derived from alignment at ch2:3556012..3558094+ (Aspergillus niger KJC3)
ATGGCGAACGCTTCGACCGAAACCCGGGTCCTCTACGGCATCGTGGACAT
GGGCAGCAATGGCATACGATTCTCGATAACAGACCTCTCCCCCCATGCCG
CGCGCCTCATGCCCATCCTATTCCAAGACCGAGCCGGCATCTCGCTCTAC
GACGCGCAATTCTCCGGCCCCACGCGGGGCCCAATCTCACCCCCCACCAC
CGGGGAAGTCATCCACCGACTGGCCCAATTTCAACTCACCTGCGACGATT
TCCAAGTACCCAAGGAGAACATCTACGTCCTAGCTACAGAGGCGACCAGG
ACGGCCTCAAACTCTGAAGAATTCAGAGCGCGAATCAAAGAATATACCGG
GTGGGAAGTCACTCTCCTCTCGAAGGAAGATGAAGGGAGGATAGGGGCAT
TAGGGATCGCGAGCAGCTCTGCCTCCGTGGCAGGTATCGCCATGGATCTA
GGGGGCGGAAGCACCCAGATCACATGGGTGATGGAGTCAGAGGGCACTGT
TACGACGAGTCCGAAGGGCTCGTTCAGTTTCCCGTATGGAGCCGCGGCGT
TGACGAAACGGTTAGAGGAGGCACAGAAACAAGGGAAAGATGCTGTGAAA
GAGCTCAAGAGTGAGATGACTCGGAATATCCAGGACGCGTATCGCCAGCT
GGATGTCCCCAACGCGCTGGTAGAGATGGCCCGCAGGCGAGGCAGGTTCG
ATCTATATCTCTGCGGCGGGGGATTCCGCGGCTGGGGGTACGTACTGATG
AAGCAGAGCAAAGTGAACCCGTACCCGATCCCCATAATCAACGGATTCCG
CGTCAAGAGAGAAGACTTCCACGATACAGTCTCAGTCCTGGAAGTGATTT
CCGATTCCGACGAGAAGATCTTCGGCGTATCAGAACGCCGCGCCTCCCAG
ATCCCCGCCGTGGCCGTTCTCGTGGACGTGATCATGGACGCATTACCGGA
GATCACTCACATCCAGTTCTGCCAGGGCGGCGTTCGCGAAGGATACTTAT
TCGACCGACTATCCAGCGAAGTGCGAGCCCAGGACCCCCTCCTCGCAGCA
ACAGTGCCATACGCACCCCCCTCAGCAAACGCAATCAGAGACCTCCTCCA
ATCAGCACTACCCACTTCACCTTCACCCATCGCCTCAATCCACCCTCCCC
CATCCTTCACCCCGAACCTAATCGCAGCCATAACTAACCTCCTCTACGCC
CACTCCCAAGTCCCCCGTGAATCCCGCTCCGCCGCAGCCCTCCACAGCAC
GACGACGGGCCTCCTCTCCTCCACGAACTGTCTCTCCCATGTCGAACGAG
CCCTCATTGCCCTTGTGCTTTGTGAGCGCTGGACTGAAGACCTAGCGCCC
ATGGACCAGGCGTACCATAAGCAACTGAGTCGGTGTCTCACGGCGCAGGA
GGTATGGTGGGCTCGGTATCTGGGGAGAGTAGCTGTTCTGGTCGGGGACG
TGTATCCTGCTGGGAGGGTGGAGGGCCAGTGGCGGATCCGGATTGAGACG
CAGTGGGAGGAGATCGAGAAGAAGGAACGGCGTGATTTGTTGAGGGTGAA
TGTGTGGAAGAATGTGAGGTTTTTTGAAGTGCTAGAGGAGGATAGGTTGC
GGGAGAGGACGGAGAAGGTTGAGAAGGTTGGGAAGAGGAAGAAGTGGGTA
AGCGAGTATGGGGTCAAGGTTAAGGTGAGTATTCTCTAGATGGCGAACGC
TTCGACCGAAACCCGGGTCCTCTACGGCATCGTGGACATGGGCAGCAATG
GCATACGATTCTCGATAACAGACCTCTCCCCCCATGCCGCGCGCCTCATG
CCCATCCTATTCCAAGACCGAGCCGGCATCTCGCTCTACGACGCGCAATT
CTCCGGCCCCACGCGGGGCCCAATCTCACCCCCCACCACCGGGGAAGTCA
TCCACCGACTGGCCCAATTTCAACTCACCTGCGACGATTTCCAAGTACCC
AAGGAGAACATCTACGTCCTAGCTACAGAGGCGACCAGGACGGCCTCAAA
CTCTGAAGAATTCAGAGCGCGAATCAAAGAATATACCGGGTGGGAAGTCA
CTCTCCTCTCGAAGGAAGATGAAGGGAGGATAGGGGCATTAGGGATCGCG
AGCAGCTCTGCCTCCGTGGCAGGTATCGCCATGGATCTAGGGGGCGGAAG
CACCCAGATCACATGGGTGATGGAGTCAGAGGGCACTGTTACGACGAGTC
CGAAGGGCTCGTTCAGTTTCCCGTATGGAGCCGCGGCGTTGACGAAACGG
TTAGAGGAGGCACAGAAACAAGGGAAAGATGCTGTGAAAGAGCTCAAGAG
TGAGATGACTCGGAATATCCAGGACGCGTATCGCCAGCTGGATGTCCCCA
ACGCGCTGGTAGAGATGGCCCGCAGGCGAGGCAGGTTCGATCTATATCTC
TGCGGCGGGGGATTCCGCGGCTGGGGGTACGTACTGATGAAGCAGAGCAA
AGTGAACCCGTACCCGATCCCCATAATCAACGGATTCCGCGTCAAGAGAG
AAGACTTCCACGATACAGTCTCAGTCCTGGAAGTGATTTCCGATTCCGAC
GAGAAGATCTTCGGCGTATCAGAACGCCGCGCCTCCCAGATCCCCGCCGT
GGCCGTTCTCGTGGACGTGATCATGGACGCATTACCGGAGATCACTCACA
TCCAGTTCTGCCAGGGCGGCGTTCGCGAAGGATACTTATTCGACCGACTA
TCCAGCGAAGTGCGAGCCCAGGACCCCCTCCTCGCAGCAACAGTGCCATA
CGCACCCCCCTCAGCAAACGCAATCAGAGACCTCCTCCAATCAGCACTAC
CCACTTCACCTTCACCCATCGCCTCAATCCACCCTCCCCCATCCTTCACC
CCGAACCTAATCGCAGCCATAACTAACCTCCTCTACGCCCACTCCCAAGT
CCCCCGTGAATCCCGCTCCGCCGCAGCCCTCCACAGCACGACGACGGGCC
TCCTCTCCTCCACGAACTGTCTCTCCCATGTCGAACGAGCCCTCATTGCC
CTTGTGCTTTGTGAGCGCTGGACTGAAGACCTAGCGCCCATGGACCAGGC
GTACCATAAGCAACTGAGTCGGTGTCTCACGGCGCAGGAGGTATGGTGGG
CTCGGTATCTGGGGAGAGTAGCTGTTCTGGTCGGGGACGTGTATCCTGCT
GGGAGGGTGGAGGGCCAGTGGCGGATCCGGATTGAGACGCAGTGGGAGGA
GATCGAGAAGAAGGAACGGCGTGATTTGTTGAGGGTGAATGTGTGGAAGA
ATGTGAGGTTTTTTGAAGTGCTAGAGGAGGATAGGTTGCGGGAGAGGACG
GAGAAGGTTGAGAAGGTTGGGAAGAGGAAGAAGTGGGTAAGCGAGTATGG
GGTCAAGGTTAAGGTGAGTATTCTCTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR043129 |
| DBxref | InterPro:IPR003695 |
| DBxref | PFAM:PF02541 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3556012..3558094 + |
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