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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3570525..3572406- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002781-T1 ID=KJC3_002781-T1|Name=KJC3_002781-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1882bp|location=Sequence derived from alignment at ch2:3570525..3572406- (Aspergillus niger KJC3)
AAGCAGGATGCGATCCCCGCACATCGGAGAATTGCATACCGTTGAAGCAA
TCCAAGCAATTGGCAGGTGTCATCTCCATTACGTACCGTGACCTTCATAC
CCTCCGTATTTATACCTGCCCCTCCCTCCCCCGCTTCTCCTGCTTTCTTC
CTCTCTCTTTCTCTCTTCCATCAACTCAACTTCCATCTACTTCACTACTT
CCTGTCAAGTCTTCCATCGACTTTCATCACAAGTCATCCTCTCCCATGTT
TGTATTCCCTGTATAGACCGTACTGACCTCTTCCCTAGAAACCCTCGTGC
AATGTAATTCCACCTGCGTCGGCCCCTCCCCGGGGTCTCGTCTCAATACT
TCATTACACACGATGGAAGTCATGCAATGCCTTTGGCTGGACTCTCTCAA
TGATCAGGTATCTCAGGTAAATCTTGGGCGTGGACCGGTGTTCGTTCCTA
TCCGTTGGTTGTGCAGCATTGCTAGCATTGCTGCCTGCCATCGGCTCTGG
GTTCGTTCTGAGATTATACGGTTAAACTTGATCTGGATAATACCAGCGAA
AGGATCATGCCTTCCCTCGTTTCCCCCCACTTGATGGAATGGCTAACAAT
TCCCAGTCCCACCTACCACACCCTTAAAGCAACATGTCTCCTCCCGCTGC
TATCTTCGAGCCCACCGTGGTCCCCACTGGCATCAAGTCCAACGTGGTGG
TCCCGGAGGCCGCTCCCGTCACTGGCTCGTCCCAGACCCAGCTGCTTGAC
CACTTCGCTGGCAAGTGGGACAACTTCAAGTTCGCTCCCATCCGTGAGAG
TCAGGTTTCGCGTGCTATGACCAGACGCTACTTCCAGGATCTGGACAAGT
ACGCTGAGAGTGACATTGTCATTGTGGGTGCTGGTTCCTGCGGTTTGAGC
ACCGCGTATGTTCTGGCCAAGGCTCGCCCGGACCTGAAGATTGCCATTAT
CGAGGCCAATGTTTCCCCTGGTTCGTCCTCCATATAATTCTCCACATAGT
TCGCCAGATGGGTCAACATACTAACTCTCCATAGGTGGTGGTGCCTGGCT
TGGTGGCCAGCTCTTCTCCGCCATGGTCATGCGTCGTCCCGCCGAGGTCT
TCCTGAACGAGCTGGGCGTTCCCTACGAGGAAGACCTAGCGAACCCCAAC
TACGTTGTGGTCAAGCACGCCTCGCTGTTCACCTCGACCCTGTTGTCCAA
GGTTCTCTCCTTCCCCAACGTCAAGCTCTTCAACGCCACCAGCGTGGAGG
ACCTGATCACTCGCCCTGCTGCCAGCGGCGACCCCAAGGAAGTCCGCATT
GCCGGTGTGGTCACGAACTGGACCCTGGTCACACTCCACCACGACGACCA
CTCCTGCATGGACCCTAACACCATCAACGCTCCCGTGATCATCAGTACCA
CCGGCCACGACGGTCCTTTCGGTGCCTTCTCGGCCAAGAGACTCGTCTCC
ATGAACAGCGTCGACAAGCTGGGCGGTATGCGCGGCTTGGACATGAACTC
GGCCGAGGACGCCATCGTCAAGAACACCCGTGAGGTCACCAAGGGTTTGA
TCATCGGTGGTATGGAGCTGTCGGAGATCGATGGCTTCAACCGCATGGGT
CCTACTTTCGGTGCTATGGTCCTGAGCGGTGTCAAGGCTGCCGAGGAGGC
GCTGCAGATCTTTGACGAGCGTAAGCGCGAGTGCGCTGAGTAAATGTCTT
CAGTCAACTCAATTGAGTGTGAGAAATCACATGGAGTTTGATTTCACTCG
TTATGCGATGTGTTATGTGGAAGATTCCGCACGCGGTGACTAAATTGCAA
CACACGAGGACGATGACGTCGCTGGCTAGTTAACGACACTCTTTATGATC
ACAATATGACTATTCACTATCTCATATTTCAA back to topCoding sequence (CDS) from alignment at ch2:3570525..3572406- >KJC3_002781-T1 ID=KJC3_002781-T1|Name=KJC3_002781-T1|organism=Aspergillus niger KJC3|type=CDS|length=1992bp|location=Sequence derived from alignment at ch2:3570525..3572406- (Aspergillus niger KJC3)
GTGGTGGTGCCTGGCTTGGTGGCCAGCTCTTCTCCGCCATGGTCATGCGT
CGTCCCGCCGAGGTCTTCCTGAACGAGCTGGGCGTTCCCTACGAGGAAGA
CCTAGCGAACCCCAACTACGTTGTGGTCAAGCACGCCTCGCTGTTCACCT
CGACCCTGTTGTCCAAGGTTCTCTCCTTCCCCAACGTCAAGCTCTTCAAC
GCCACCAGCGTGGAGGACCTGATCACTCGCCCTGCTGCCAGCGGCGACCC
CAAGGAAGTCCGCATTGCCGGTGTGGTCACGAACTGGACCCTGGTCACAC
TCCACCACGACGACCACTCCTGCATGGACCCTAACACCATCAACGCTCCC
GTGATCATCAGTACCACCGGCCACGACGGTCCTTTCGGTGCCTTCTCGGC
CAAGAGACTCGTCTCCATGAACAGCGTCGACAAGCTGGGCGGTATGCGCG
GCTTGGACATGAACTCGGCCGAGGACGCCATCGTCAAGAACACCCGTGAG
GTCACCAAGGGTTTGATCATCGGTGGTATGGAGCTGTCGGAGATCGATGG
CTTCAACCGCATGGGTCCTACTTTCGGTGCTATGGTCCTGAGCGGTGTCA
AGGCTGCCGAGGAGGCGCTGCAGATCTTTGACGAGCGTAAGCGCGAGTGC
GCTGAGTAAATGTCTCCTCCCGCTGCTATCTTCGAGCCCACCGTGGTCCC
CACTGGCATCAAGTCCAACGTGGTGGTCCCGGAGGCCGCTCCCGTCACTG
GCTCGTCCCAGACCCAGCTGCTTGACCACTTCGCTGGCAAGTGGGACAAC
TTCAAGTTCGCTCCCATCCGTGAGAGTCAGGTTTCGCGTGCTATGACCAG
ACGCTACTTCCAGGATCTGGACAAGTACGCTGAGAGTGACATTGTCATTG
TGGGTGCTGGTTCCTGCGGTTTGAGCACCGCGTATGTTCTGGCCAAGGCT
CGCCCGGACCTGAAGATTGCCATTATCGAGGCCAATGTTTCCCCTGGTGG
TGGTGCCTGGCTTGGTGGCCAGCTCTTCTCCGCCATGGTCATGCGTCGTC
CCGCCGAGGTCTTCCTGAACGAGCTGGGCGTTCCCTACGAGGAAGACCTA
GCGAACCCCAACTACGTTGTGGTCAAGCACGCCTCGCTGTTCACCTCGAC
CCTGTTGTCCAAGGTTCTCTCCTTCCCCAACGTCAAGCTCTTCAACGCCA
CCAGCGTGGAGGACCTGATCACTCGCCCTGCTGCCAGCGGCGACCCCAAG
GAAGTCCGCATTGCCGGTGTGGTCACGAACTGGACCCTGGTCACACTCCA
CCACGACGACCACTCCTGCATGGACCCTAACACCATCAACGCTCCCGTGA
TCATCAGTACCACCGGCCACGACGGTCCTTTCGGTGCCTTCTCGGCCAAG
AGACTCGTCTCCATGAACAGCGTCGACAAGCTGGGCGGTATGCGCGGCTT
GGACATGAACTCGGCCGAGGACGCCATCGTCAAGAACACCCGTGAGGTCA
CCAAGGGTTTGATCATCGGTGGTATGGAGCTGTCGGAGATCGATGGCTTC
AACCGCATGGGTCCTACTTTCGGTGCTATGGTCCTGAGCGGTGTCAAGGC
TGCCGAGGAGGCGCTGCAGATCTTTGACGAGCGTAAGCGCGAGTGCGCTG
AGTAAATGTCTCCTCCCGCTGCTATCTTCGAGCCCACCGTGGTCCCCACT
GGCATCAAGTCCAACGTGGTGGTCCCGGAGGCCGCTCCCGTCACTGGCTC
GTCCCAGACCCAGCTGCTTGACCACTTCGCTGGCAAGTGGGACAACTTCA
AGTTCGCTCCCATCCGTGAGAGTCAGGTTTCGCGTGCTATGACCAGACGC
TACTTCCAGGATCTGGACAAGTACGCTGAGAGTGACATTGTCATTGTGGG
TGCTGGTTCCTGCGGTTTGAGCACCGCGTATGTTCTGGCCAAGGCTCGCC
CGGACCTGAAGATTGCCATTATCGAGGCCAATGTTTCCCCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009228 | thiamine biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002781-T1.utr3p1 | KJC3_002781-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027495 |
| DBxref | InterPro:IPR036188 |
| DBxref | InterPro:IPR002922 |
| DBxref | PFAM:PF01946 |
| DBxref | PFAM:PF13450 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3570525..3572406 - |
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