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KJC3_002784-T1, KJC3_002784-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002784-T1
Unique NameKJC3_002784-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3580384..3581228-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002784-T1 ID=KJC3_002784-T1|Name=KJC3_002784-T1|organism=Aspergillus niger KJC3|type=mRNA|length=845bp|location=Sequence derived from alignment at ch2:3580384..3581228- (Aspergillus niger KJC3)
GATTCCCGCTGTTGCTTTTCGCGGCCGCCAAACCGAACTCGATCCTGACT
GGAATCTTTAACCTCATCTCGCCCATCCTCTCTGCCTCGCTGTTTCCCCC
GCTCCCTTCCCCTTTATATCCCTATCGATAACCGTCACAATGGCCGGCGC
CGTAAGTCTTCTATTCGTATGGGTTTTGTGACAATTCAATGGCTAACTGC
AGGGTGTTCCCGTTCCAGATCGCTTCCGCTATCTACCAGCATGTCTCCCC
TTTCACTCCGGATATTTAATCGATAATCGTCGCCCGTCATGGAATGGTCT
TGCTAATTGGGAATCTTTGATTGACTTACAGGGGCCTGATCCGCCGTAAC
GCGGTCTACCTGACCACCATCTTCGCCAGTGCCTTCGCCTTCGAGCTGTA
CGTTTCTGTCATCGGGATCTTTCGGGGGGAGACAATCGCTAAATAATCAT
CTTGGAATAGGGCCTTCGACACTGCTTCCAACAAGGTCTGGGATTCTTTC
AACCGCGGCGTACGTTTCTTACCTCCCACGACCTTCCCGCATGGGCTAAT
ACTAACGGGCTCGTTTCACTACTGCAGCGCCAATGGAAGGACATCAAGCA
CCAGTACCTCAACAAGGCCGACGAGGAGGACGATGAGTAAATACGGGTAC
AATTCTCGCCCTGTCACATACGAAAGAATAGAAGCGGTGCTGAGGGGTCA
AAATATCCATTCCCATGTCATACTATAGCCGAGTGCCGGGAACGAGGAGT
GCTATAATCCAGGGTGTTTGTACGAGATAGATTCGCAATAACCTGTAACT
TTTTCCTTTTCCAGAGCAGTCCATAGGAAGACTCGTGTTCACATG
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Coding sequence (CDS) from alignment at ch2:3580384..3581228-

>KJC3_002784-T1 ID=KJC3_002784-T1|Name=KJC3_002784-T1|organism=Aspergillus niger KJC3|type=CDS|length=1050bp|location=Sequence derived from alignment at ch2:3580384..3581228- (Aspergillus niger KJC3)
CGCCAATGGAAGGACATCAAGCACCAGTACCTCAACAAGGCCGACGAGGA
GGACGATGAGTAAGGCCTTCGACACTGCTTCCAACAAGGTCTGGGATTCT
TTCAACCGCGGCGGGCCTGATCCGCCGTAACGCGGTCTACCTGACCACCA
TCTTCGCCAGTGCCTTCGCCTTCGAGCTATCGCTTCCGCTATCTACCAAT
GGCCGGCGCCCGCCAATGGAAGGACATCAAGCACCAGTACCTCAACAAGG
CCGACGAGGAGGACGATGAGTAAGGCCTTCGACACTGCTTCCAACAAGGT
CTGGGATTCTTTCAACCGCGGCGGGCCTGATCCGCCGTAACGCGGTCTAC
CTGACCACCATCTTCGCCAGTGCCTTCGCCTTCGAGCTATCGCTTCCGCT
ATCTACCAATGGCCGGCGCCCGCCAATGGAAGGACATCAAGCACCAGTAC
CTCAACAAGGCCGACGAGGAGGACGATGAGTAAGGCCTTCGACACTGCTT
CCAACAAGGTCTGGGATTCTTTCAACCGCGGCGGGCCTGATCCGCCGTAA
CGCGGTCTACCTGACCACCATCTTCGCCAGTGCCTTCGCCTTCGAGCTAT
CGCTTCCGCTATCTACCAATGGCCGGCGCCCGCCAATGGAAGGACATCAA
GCACCAGTACCTCAACAAGGCCGACGAGGAGGACGATGAGTAAGGCCTTC
GACACTGCTTCCAACAAGGTCTGGGATTCTTTCAACCGCGGCGGGCCTGA
TCCGCCGTAACGCGGTCTACCTGACCACCATCTTCGCCAGTGCCTTCGCC
TTCGAGCTATCGCTTCCGCTATCTACCAATGGCCGGCGCCCGCCAATGGA
AGGACATCAAGCACCAGTACCTCAACAAGGCCGACGAGGAGGACGATGAG
TAAGGCCTTCGACACTGCTTCCAACAAGGTCTGGGATTCTTTCAACCGCG
GCGGGCCTGATCCGCCGTAACGCGGTCTACCTGACCACCATCTTCGCCAG
TGCCTTCGCCTTCGAGCTATCGCTTCCGCTATCTACCAATGGCCGGCGCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005750mitochondrial respiratory chain complex III
GO:0005743mitochondrial inner membrane
Vocabulary: Biological Process
TermDefinition
GO:0006122mitochondrial electron transport, ubiquinol to cytochrome c
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002784KJC3_002784Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002784-T1KJC3_002784-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002784-T1.cdsKJC3_002784-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002784-T1.utr3p1KJC3_002784-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002784-T1.exon5KJC3_002784-T1.exon5Aspergillus niger KJC3exon
KJC3_002784-T1.exon4KJC3_002784-T1.exon4Aspergillus niger KJC3exon
KJC3_002784-T1.exon3KJC3_002784-T1.exon3Aspergillus niger KJC3exon
KJC3_002784-T1.exon2KJC3_002784-T1.exon2Aspergillus niger KJC3exon
KJC3_002784-T1.exon1KJC3_002784-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002784-T1.utr5p1KJC3_002784-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008027
DBxrefInterPro:IPR036656
DBxrefPFAM:PF05365
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3580384..3581228 -
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