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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3603816..3607732+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002791-T1 ID=KJC3_002791-T1|Name=KJC3_002791-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3917bp|location=Sequence derived from alignment at ch2:3603816..3607732+ (Aspergillus niger KJC3)
CGTTCTCCAGCTCGTCCCCTTGTCCTCTCTCCCCTTTTCATCACTCTCTG
TCAGACTCGAATCGATTTGTATCATTTTAGATTCTAGAGTGTCTTGAGAT
ATCGAATTGGGTCTTATTTGTTACTCTCAACCGGCCAGTTGGCTTCTCTT
GCCACGGCCCCGCTTGGTTGCCCTGGAGACCATCGATTAACGGCTACTTC
CGTCATTGACGAGCTGGGGGCTGCACAATAATCAAGGTTCTCATCAAAAG
AGCGGAGACCAGGAAGATCTTTCCTTCCCATCCGTCCGTTCAATTTTTCC
CTCTCCGCAAAACTCCATCCGCCTTTTCCTTTTCCACATCGGTTTTCGTG
GCGTTGTTAAGCTACGCGAATCGCTTCCAACATGGCGGACGGTTTGGAGT
ATCTCGCTCCGGATTTTGATCTTAATTCCCTTACCGTGCCGCGTCTGCGA
TCGATCCTTGTCAGCCATGATGTTCCCTACCCTGCCTCAGCCAAAAAGGC
TCAACTTATTGGTATCTTGGAGGCGGAAGTTATGCCGCAGGCTCGAAAGC
TGCTGAGAGAGCGCGAGAGAGTCAGGAGGACCAGCGAGGGTATTACAGAC
ATGGGAAGTCGCGCGACGTCAGTTGCTAGCGACTATGATGACTACCGCGG
AACCCCGGCGAGGGATTCGATGCCACCCCCGCCTACACCGTCTACGGTAT
CGACAGCCACTGGCAGAAGGGGACGTTCTAGAGCTAGCGTTAGAGCGTCG
ACAGCGGACACAGAGGAAAGAAACGCTACGGCTACTCCATCAGCGAGCTC
GAGGAAATCTATCCCCAGGTCACAATCGAGAAGATACCGCACGTCAGACA
CGGAGCCGCAGGAAGATATGTTGGCAACGCCTATGGCAACTGACACCGTG
ACACCACGGAAGTCCACTACCAGAAAATCCAGACGCAGCGAGATGACGCC
ATCTGTGAACCCCGAACCTCCCGTTTCTGCCATTAAACTTGAACCGAAAG
AGGAAAGCGTTTTCACCGATGATAATCCCTTCCAGAGTGGATCGCCCGCC
CGTTGGGAATACAAAAGCCCGAGGCCGTCTAGTCATAAATCGGAAAGAAA
GAGCAGCTCGCGGTTTTCGCTTGAATCATCTGCCTTGAGTAGTGGTCTGC
GGTCAAGAAAGTCTGTCACGCCAGCAGATCTGCACGATCAACAGGGTGCT
ACTCCATCAAAACGGTCACCATTTGAGTTGCCCATCTCGAATATGAGAAC
GCCACCACAGAATTTCGATCCGATCAAGTACGAGGAGGATAGTGATTTTA
GTGCGGGCGAGGAATTTACACCAGACGAGCAGTTGGCGCTCGAGAGGGAG
CACGCAGACTTGATGTATAGTGCCCCAAGCCGGCGGCCACAGAAACAAGG
AACTACAAGCCGCGCTGCGCCTTGGGTTATTCTCGTCGTATTGTTCGCAA
GTTTCGCTGCTTGGTGGCGTAAGGAGAAGGTTGAGATCGGATTCTGCGGC
ATTGGCAAACCCACTTGGTCCTTGGCCGAAACCAGGGTCCCTGAATGGGC
CAACATCCTTGAACCTCAATGTGAACCGTGCCCACCCCATGCATTCTGCT
ACCCCAACTTTGAAGCTCGGTGTGAACACGACTTCTTGCTCAAGGCACAC
CCGCTGTCTCTGGGAGGCTTGGTTCCGCTTCCCCCCACCTGTGAGCCAGA
CAGCGAGAAAGCGCGTCGCGTGAAGGCTGTCGCAGATAAAGCCTTGGAAG
CATTGCGTGATCGCAGGGCGAAGTGGGAGTGTGGTGAGCTGGCGCAGGAT
GAAGAAGGCACAGTCGGTGCGGAAATTAGCGAATCTGACTTGAAACAGGA
AGTGGGGAGACAACGTCGGAAAGGCATGAGTGACACTGAATTTGATGACC
TTTGGAAGGGAGCTCTGGGCGAAGTGATTGGGAGGGAGGAGGTTGTGACC
AGAATGAAGCAGTAAGTCGATCAACTTTCTTAATCTGGAGGCTTTATCGC
ACCTGCCCGGAACCTATGGTGGCACCGAAGGAATCAGATTCTGACGTGTA
TTCACGGCACTAACAGAGGCGACAACATGATTACAGACCATCCTCTGTCC
TCACCCTCACCTCGACCTCCGTCAGCCGTCTCCCTCTCACATGCGCCTTC
CGCCGCAACATCCGACTCTCTCTCGTCGCGTATCGATTCCCTCTTTCGAT
TTTAGCTCTCTGCGCATGTGTAGTCTTCTACGCACGCTCAAGGGTCCGGG
CTCGCCGTTCTGACATGGCTCGAGTCCCGGAATTAGTCGCTACCACACTC
GACCGGTTGGCGACGCAAGCTGCCCTTCACGCTCGGGGTGCTGCTCGCGA
GCCCTATATTCCCATTGGTCAATTGCGCGACGATGTACTCCGCTCAGAAC
TGCGTGGCAGTCGGCGCGAAGCATTGTGGAAGCGCGTTCGCAGTGTAGTG
GAGGGCAATGCGAACGTTCGCGCATCAGTTCGCGAGGGCCGTGGTGGGGA
TGTTGCTCGCGTCTGGGAGTGGATCGGTGGGATTGGCAGTGTCCGGAGTG
AGATCGAGAGCAGCATTGCAACAGGCCGTGAGAGCGGTAAAGTGCATTTT
TCCCCACTACCTGCCGAGCAGAGCCGTGATCAATCCGTTGGAGAGGCCAC
GCTGGCGCAGAGCCCAGGAGAATTGCGCAAATGGGATGAGGGCAGACCTA
TCTACTGAAGGTCTGCTCTGCTTCCTCCTTATCCCCTTCTTGGAAGTTCA
TACTTTGCCCTCTACATTATTTTACAACTTCGTGTATACACTATTAGGAT
TCCCCCGCAGCTCAGAATTTTGAATTAGGCAAACAATTTTGCTCGTTGTG
TTCCAATTTCGCTGCACTTTGTTCGTACGATGTTTTGGCGGTGTGGATCT
CCAGCTCAAAGACCTGTTGAGCCCATAGTTTACTTGGAGGATATTACGAA
CTTCGAATAGTTGACACAGGAATTAATCTCCGAAATGAGGTGGCGCACGG
AAGTAATCTGGGATACCCCCCATTACCCCATCCTTGCTCTGTCGGTATGT
TGCGATTACCTCAGGACAAGAAGTGAACGCTTGCATATAGCAAGGACGTC
AGTTCGGTAGGTTACTCAGGTTCATCGCCAGGCAACTCTGGTTCGTGACA
TCAAGCTGTCGTACCGAACCGACTTTGAGTGCGATCACACGACCCCACAG
CCACGGCATAGATGCCAGCCTATCAAACGCCTGATACTCCTGATCGCCAG
CGCTGAGAGGGAGGGAGCCGTGGTTACAACAGCAACGATTGCCGGGCTCC
TATACTAGTTGGACCGTTGCAACGCTCGCAAACCCCACTCACGCAACCGA
GCTTCGGCCGCCAGCGGATGGAGGTAGTCCTTTGCTGCATGACTGGTCGG
TTCAGGACCTTCATATTTATCAGCTACCTCGACACGATACTCGCACTTCC
CTACTCTGCTAGTGGATGGCGTTCATGTGGATTGGGAACTAATGGAACTG
CATTAGCGATCTGGGTCCCGAGAACGTCCCCATAGAGTTGGTTCTCTAGT
CGCGTCGGTTATCTCGAAGGGGTTTAGATTGTCGATGTGATTGGCAAGCA
GAAGATATAGATGCGGTGTAGTTCCAGGGAGTCCACTTGTACTAAGCCCG
AGTTGAAAGAACCGAATTTTAACTTGGGGGATGTTCAGAGGTCTAGCCAG
TATATAGGTTAGCACAGGGGAGTCAAGTAGTAGGGGAGGGGAGAGTTGAG
AACCTTGGCTTGGGTGAGCTCGTATTAGCCAGCCATGGTGAAAGGGGAAG
AGGCTGGGAGCAAATGCTATCGAAAAGTAAAACCGACAAGGACTCTTCTG
CTGCATGTATTTGAGGGGACCCAGTGCCCTCTCTAGTTGAATCTAGACTT
GATTGACTTTACTATTG back to topCoding sequence (CDS) from alignment at ch2:3603816..3607732+ >KJC3_002791-T1 ID=KJC3_002791-T1|Name=KJC3_002791-T1|organism=Aspergillus niger KJC3|type=CDS|length=4404bp|location=Sequence derived from alignment at ch2:3603816..3607732+ (Aspergillus niger KJC3)
ATGGCGGACGGTTTGGAGTATCTCGCTCCGGATTTTGATCTTAATTCCCT
TACCGTGCCGCGTCTGCGATCGATCCTTGTCAGCCATGATGTTCCCTACC
CTGCCTCAGCCAAAAAGGCTCAACTTATTGGTATCTTGGAGGCGGAAGTT
ATGCCGCAGGCTCGAAAGCTGCTGAGAGAGCGCGAGAGAGTCAGGAGGAC
CAGCGAGGGTATTACAGACATGGGAAGTCGCGCGACGTCAGTTGCTAGCG
ACTATGATGACTACCGCGGAACCCCGGCGAGGGATTCGATGCCACCCCCG
CCTACACCGTCTACGGTATCGACAGCCACTGGCAGAAGGGGACGTTCTAG
AGCTAGCGTTAGAGCGTCGACAGCGGACACAGAGGAAAGAAACGCTACGG
CTACTCCATCAGCGAGCTCGAGGAAATCTATCCCCAGGTCACAATCGAGA
AGATACCGCACGTCAGACACGGAGCCGCAGGAAGATATGTTGGCAACGCC
TATGGCAACTGACACCGTGACACCACGGAAGTCCACTACCAGAAAATCCA
GACGCAGCGAGATGACGCCATCTGTGAACCCCGAACCTCCCGTTTCTGCC
ATTAAACTTGAACCGAAAGAGGAAAGCGTTTTCACCGATGATAATCCCTT
CCAGAGTGGATCGCCCGCCCGTTGGGAATACAAAAGCCCGAGGCCGTCTA
GTCATAAATCGGAAAGAAAGAGCAGCTCGCGGTTTTCGCTTGAATCATCT
GCCTTGAGTAGTGGTCTGCGGTCAAGAAAGTCTGTCACGCCAGCAGATCT
GCACGATCAACAGGGTGCTACTCCATCAAAACGGTCACCATTTGAGTTGC
CCATCTCGAATATGAGAACGCCACCACAGAATTTCGATCCGATCAAGTAC
GAGGAGGATAGTGATTTTAGTGCGGGCGAGGAATTTACACCAGACGAGCA
GTTGGCGCTCGAGAGGGAGCACGCAGACTTGATGTATAGTGCCCCAAGCC
GGCGGCCACAGAAACAAGGAACTACAAGCCGCGCTGCGCCTTGGGTTATT
CTCGTCGTATTGTTCGCAAGTTTCGCTGCTTGGTGGCGTAAGGAGAAGGT
TGAGATCGGATTCTGCGGCATTGGCAAACCCACTTGGTCCTTGGCCGAAA
CCAGGGTCCCTGAATGGGCCAACATCCTTGAACCTCAATGTGAACCGTGC
CCACCCCATGCATTCTGCTACCCCAACTTTGAAGCTCGGTGTGAACACGA
CTTCTTGCTCAAGGCACACCCGCTGTCTCTGGGAGGCTTGGTTCCGCTTC
CCCCCACCTGTGAGCCAGACAGCGAGAAAGCGCGTCGCGTGAAGGCTGTC
GCAGATAAAGCCTTGGAAGCATTGCGTGATCGCAGGGCGAAGTGGGAGTG
TGGTGAGCTGGCGCAGGATGAAGAAGGCACAGTCGGTGCGGAAATTAGCG
AATCTGACTTGAAACAGGAAGTGGGGAGACAACGTCGGAAAGGCATGAGT
GACACTGAATTTGATGACCTTTGGAAGGGAGCTCTGGGCGAAGTGATTGG
GAGGGAGGAGGTTGTGACCAGAATGAAGCAACCATCCTCTGTCCTCACCC
TCACCTCGACCTCCGTCAGCCGTCTCCCTCTCACATGCGCCTTCCGCCGC
AACATCCGACTCTCTCTCGTCGCGTATCGATTCCCTCTTTCGATTTTAGC
TCTCTGCGCATGTGTAGTCTTCTACGCACGCTCAAGGGTCCGGGCTCGCC
GTTCTGACATGGCTCGAGTCCCGGAATTAGTCGCTACCACACTCGACCGG
TTGGCGACGCAAGCTGCCCTTCACGCTCGGGGTGCTGCTCGCGAGCCCTA
TATTCCCATTGGTCAATTGCGCGACGATGTACTCCGCTCAGAACTGCGTG
GCAGTCGGCGCGAAGCATTGTGGAAGCGCGTTCGCAGTGTAGTGGAGGGC
AATGCGAACGTTCGCGCATCAGTTCGCGAGGGCCGTGGTGGGGATGTTGC
TCGCGTCTGGGAGTGGATCGGTGGGATTGGCAGTGTCCGGAGTGAGATCG
AGAGCAGCATTGCAACAGGCCGTGAGAGCGGTAAAGTGCATTTTTCCCCA
CTACCTGCCGAGCAGAGCCGTGATCAATCCGTTGGAGAGGCCACGCTGGC
GCAGAGCCCAGGAGAATTGCGCAAATGGGATGAGGGCAGACCTATCTACT
GAATGGCGGACGGTTTGGAGTATCTCGCTCCGGATTTTGATCTTAATTCC
CTTACCGTGCCGCGTCTGCGATCGATCCTTGTCAGCCATGATGTTCCCTA
CCCTGCCTCAGCCAAAAAGGCTCAACTTATTGGTATCTTGGAGGCGGAAG
TTATGCCGCAGGCTCGAAAGCTGCTGAGAGAGCGCGAGAGAGTCAGGAGG
ACCAGCGAGGGTATTACAGACATGGGAAGTCGCGCGACGTCAGTTGCTAG
CGACTATGATGACTACCGCGGAACCCCGGCGAGGGATTCGATGCCACCCC
CGCCTACACCGTCTACGGTATCGACAGCCACTGGCAGAAGGGGACGTTCT
AGAGCTAGCGTTAGAGCGTCGACAGCGGACACAGAGGAAAGAAACGCTAC
GGCTACTCCATCAGCGAGCTCGAGGAAATCTATCCCCAGGTCACAATCGA
GAAGATACCGCACGTCAGACACGGAGCCGCAGGAAGATATGTTGGCAACG
CCTATGGCAACTGACACCGTGACACCACGGAAGTCCACTACCAGAAAATC
CAGACGCAGCGAGATGACGCCATCTGTGAACCCCGAACCTCCCGTTTCTG
CCATTAAACTTGAACCGAAAGAGGAAAGCGTTTTCACCGATGATAATCCC
TTCCAGAGTGGATCGCCCGCCCGTTGGGAATACAAAAGCCCGAGGCCGTC
TAGTCATAAATCGGAAAGAAAGAGCAGCTCGCGGTTTTCGCTTGAATCAT
CTGCCTTGAGTAGTGGTCTGCGGTCAAGAAAGTCTGTCACGCCAGCAGAT
CTGCACGATCAACAGGGTGCTACTCCATCAAAACGGTCACCATTTGAGTT
GCCCATCTCGAATATGAGAACGCCACCACAGAATTTCGATCCGATCAAGT
ACGAGGAGGATAGTGATTTTAGTGCGGGCGAGGAATTTACACCAGACGAG
CAGTTGGCGCTCGAGAGGGAGCACGCAGACTTGATGTATAGTGCCCCAAG
CCGGCGGCCACAGAAACAAGGAACTACAAGCCGCGCTGCGCCTTGGGTTA
TTCTCGTCGTATTGTTCGCAAGTTTCGCTGCTTGGTGGCGTAAGGAGAAG
GTTGAGATCGGATTCTGCGGCATTGGCAAACCCACTTGGTCCTTGGCCGA
AACCAGGGTCCCTGAATGGGCCAACATCCTTGAACCTCAATGTGAACCGT
GCCCACCCCATGCATTCTGCTACCCCAACTTTGAAGCTCGGTGTGAACAC
GACTTCTTGCTCAAGGCACACCCGCTGTCTCTGGGAGGCTTGGTTCCGCT
TCCCCCCACCTGTGAGCCAGACAGCGAGAAAGCGCGTCGCGTGAAGGCTG
TCGCAGATAAAGCCTTGGAAGCATTGCGTGATCGCAGGGCGAAGTGGGAG
TGTGGTGAGCTGGCGCAGGATGAAGAAGGCACAGTCGGTGCGGAAATTAG
CGAATCTGACTTGAAACAGGAAGTGGGGAGACAACGTCGGAAAGGCATGA
GTGACACTGAATTTGATGACCTTTGGAAGGGAGCTCTGGGCGAAGTGATT
GGGAGGGAGGAGGTTGTGACCAGAATGAAGCAACCATCCTCTGTCCTCAC
CCTCACCTCGACCTCCGTCAGCCGTCTCCCTCTCACATGCGCCTTCCGCC
GCAACATCCGACTCTCTCTCGTCGCGTATCGATTCCCTCTTTCGATTTTA
GCTCTCTGCGCATGTGTAGTCTTCTACGCACGCTCAAGGGTCCGGGCTCG
CCGTTCTGACATGGCTCGAGTCCCGGAATTAGTCGCTACCACACTCGACC
GGTTGGCGACGCAAGCTGCCCTTCACGCTCGGGGTGCTGCTCGCGAGCCC
TATATTCCCATTGGTCAATTGCGCGACGATGTACTCCGCTCAGAACTGCG
TGGCAGTCGGCGCGAAGCATTGTGGAAGCGCGTTCGCAGTGTAGTGGAGG
GCAATGCGAACGTTCGCGCATCAGTTCGCGAGGGCCGTGGTGGGGATGTT
GCTCGCGTCTGGGAGTGGATCGGTGGGATTGGCAGTGTCCGGAGTGAGAT
CGAGAGCAGCATTGCAACAGGCCGTGAGAGCGGTAAAGTGCATTTTTCCC
CACTACCTGCCGAGCAGAGCCGTGATCAATCCGTTGGAGAGGCCACGCTG
GCGCAGAGCCCAGGAGAATTGCGCAAATGGGATGAGGGCAGACCTATCTA
CTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002791-T1.utr5p1 | KJC3_002791-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002791-T1.utr3p1 | KJC3_002791-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR041885 |
| DBxref | InterPro:IPR025856 |
| DBxref | InterPro:IPR018996 |
| DBxref | PFAM:PF09402 |
| DBxref | PFAM:PF12949 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3603816..3607732 + |
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