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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3603816..3607732+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002791-T2 ID=KJC3_002791-T2|Name=KJC3_002791-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3917bp|location=Sequence derived from alignment at ch2:3603816..3607732+ (Aspergillus niger KJC3)
CGTTCTCCAGCTCGTCCCCTTGTCCTCTCTCCCCTTTTCATCACTCTCTG
TCAGACTCGAATCGATTTGTATCATTTTAGATTCTAGAGTGTCTTGAGAT
ATCGAATTGGGTCTTATTTGTTACTCTCAACCGGCCAGTTGGCTTCTCTT
GCCACGGCCCCGCTTGGTTGCCCTGGAGACCATCGATTAACGGCTACTTC
CGTCATTGACGAGCTGGGGGCTGCACAATAATCAAGGTTCTCATCAAAAG
AGCGGAGACCAGGAAGATCTTTCCTTCCCATCCGTCCGTTCAATTTTTCC
CTCTCCGCAAAACTCCATCCGCCTTTTCCTTTTCCACATCGGTTTTCGTG
GCGTTGTTAAGCTACGCGAATCGCTTCCAACATGGCGGACGGTTTGGAGT
ATCTCGCTCCGGATTTTGATCTTAATTCCCTTACCGTGCCGCGTCTGCGA
TCGATCCTTGTCAGCCATGATGTTCCCTACCCTGCCTCAGCCAAAAAGGC
TCAACTTATTGGTATCTTGGAGGCGGAAGTTATGCCGCAGGCTCGAAAGC
TGCTGAGAGAGCGCGAGAGAGTCAGGAGGACCAGCGAGGGTATTACAGAC
ATGGGAAGTCGCGCGACGTCAGTTGCTAGCGACTATGATGACTACCGCGG
AACCCCGGCGAGGGATTCGATGCCACCCCCGCCTACACCGTCTACGGTAT
CGACAGCCACTGGCAGAAGGGGACGTTCTAGAGCTAGCGTTAGAGCGTCG
ACAGCGGACACAGAGGAAAGAAACGCTACGGCTACTCCATCAGCGAGCTC
GAGGAAATCTATCCCCAGGTCACAATCGAGAAGATACCGCACGTCAGACA
CGGAGCCGCAGGAAGATATGTTGGCAACGCCTATGGCAACTGACACCGTG
ACACCACGGAAGTCCACTACCAGAAAATCCAGACGCAGCGAGATGACGCC
ATCTGTGAACCCCGAACCTCCCGTTTCTGCCATTAAACTTGAACCGAAAG
AGGAAAGCGTTTTCACCGATGATAATCCCTTCCAGAGTGGATCGCCCGCC
CGTTGGGAATACAAAAGCCCGAGGCCGTCTAGTCATAAATCGGAAAGAAA
GAGCAGCTCGCGGTTTTCGCTTGAATCATCTGCCTTGAGTAGTGGTCTGC
GGTCAAGAAAGTCTGTCACGCCAGCAGATCTGCACGATCAACAGGGTGCT
ACTCCATCAAAACGGTCACCATTTGAGTTGCCCATCTCGAATATGAGAAC
GCCACCACAGAATTTCGATCCGATCAAGTACGAGGAGGATAGTGATTTTA
GTGCGGGCGAGGAATTTACACCAGACGAGCAGTTGGCGCTCGAGAGGGAG
CACGCAGACTTGATGTATAGTGCCCCAAGCCGGCGGCCACAGAAACAAGG
AACTACAAGCCGCGCTGCGCCTTGGGTTATTCTCGTCGTATTGTTCGCAA
GTTTCGCTGCTTGGTGGCGTAAGGAGAAGGTTGAGATCGGATTCTGCGGC
ATTGGCAAACCCACTTGGTCCTTGGCCGAAACCAGGGTCCCTGAATGGGC
CAACATCCTTGAACCTCAATGTGAACCGTGCCCACCCCATGCATTCTGCT
ACCCCAACTTTGAAGCTCGGTGTGAACACGACTTCTTGCTCAAGGCACAC
CCGCTGTCTCTGGGAGGCTTGGTTCCGCTTCCCCCCACCTGTGAGCCAGA
CAGCGAGAAAGCGCGTCGCGTGAAGGCTGTCGCAGATAAAGCCTTGGAAG
CATTGCGTGATCGCAGGGCGAAGTGGGAGTGTGGTGAGCTGGCGCAGGAT
GAAGAAGGCACAGTCGGTGCGGAAATTAGCGAATCTGACTTGAAACAGGA
AGTGGGGAGACAACGTCGGAAAGGCATGAGTGACACTGAATTTGATGACC
TTTGGAAGGGAGCTCTGGGCGAAGTGATTGGGAGGGAGGAGGTTGTGACC
AGAATGAAGCAGTAAGTCGATCAACTTTCTTAATCTGGAGGCTTTATCGC
ACCTGCCCGGAACCTATGGTGGCACCGAAGGAATCAGATTCTGACGTGTA
TTCACGGCACTAACAGAGGCGACAACATGATTACAGACCATCCTCTGTCC
TCACCCTCACCTCGACCTCCGTCAGCCGTCTCCCTCTCACATGCGCCTTC
CGCCGCAACATCCGACTCTCTCTCGTCGCGTATCGATTCCCTCTTTCGAT
TTTAGCTCTCTGCGCATGTGTAGTCTTCTACGCACGCTCAAGGGTCCGGG
CTCGCCGTTCTGACATGGCTCGAGTCCCGGAATTAGTCGCTACCACACTC
GACCGGTTGGCGACGCAAGCTGCCCTTCACGCTCGGGGTGCTGCTCGCGA
GCCCTATATTCCCATTGGTCAATTGCGCGACGATGTACTCCGCTCAGAAC
TGCGTGGCAGTCGGCGCGAAGCATTGTGGAAGCGCGTTCGCAGTGTAGTG
GAGGGCAATGCGAACGTTCGCGCATCAGTTCGCGAGGGCCGTGGTGGGGA
TGTTGCTCGCGTCTGGGAGTGGATCGGTGGGATTGGCAGTGTCCGGAGTG
AGATCGAGAGCAGCATTGCAACAGGCCGTGAGAGCGGTAAAGTGCATTTT
TCCCCACTACCTGCCGAGCAGAGCCGTGATCAATCCGTTGGAGAGGCCAC
GCTGGCGCAGAGCCCAGGAGAATTGCGCAAATGGGATGAGGGCAGACCTA
TCTACTGAAGGTCTGCTCTGCTTCCTCCTTATCCCCTTCTTGGAAGTTCA
TACTTTGCCCTCTACATTATTTTACAACTTCGTGTATACACTATTAGGAT
TCCCCCGCAGCTCAGAATTTTGAATTAGGCAAACAATTTTGCTCGTTGTG
TTCCAATTTCGCTGCACTTTGTTCGTACGATGTTTTGGCGGTGTGGATCT
CCAGCTCAAAGACCTGTTGAGCCCATAGTTTACTTGGAGGATATTACGAA
CTTCGAATAGTTGACACAGGAATTAATCTCCGAAATGAGGTGGCGCACGG
AAGTAATCTGGGATACCCCCCATTACCCCATCCTTGCTCTGTCGGTATGT
TGCGATTACCTCAGGACAAGAAGTGAACGCTTGCATATAGCAAGGACGTC
AGTTCGGTAGGTTACTCAGGTTCATCGCCAGGCAACTCTGGTTCGTGACA
TCAAGCTGTCGTACCGAACCGACTTTGAGTGCGATCACACGACCCCACAG
CCACGGCATAGATGCCAGCCTATCAAACGCCTGATACTCCTGATCGCCAG
CGCTGAGAGGGAGGGAGCCGTGGTTACAACAGCAACGATTGCCGGGCTCC
TATACTAGTTGGACCGTTGCAACGCTCGCAAACCCCACTCACGCAACCGA
GCTTCGGCCGCCAGCGGATGGAGGTAGTCCTTTGCTGCATGACTGGTCGG
TTCAGGACCTTCATATTTATCAGCTACCTCGACACGATACTCGCACTTCC
CTACTCTGCTAGTGGATGGCGTTCATGTGGATTGGGAACTAATGGAACTG
CATTAGCGATCTGGGTCCCGAGAACGTCCCCATAGAGTTGGTTCTCTAGT
CGCGTCGGTTATCTCGAAGGGGTTTAGATTGTCGATGTGATTGGCAAGCA
GAAGATATAGATGCGGTGTAGTTCCAGGGAGTCCACTTGTACTAAGCCCG
AGTTGAAAGAACCGAATTTTAACTTGGGGGATGTTCAGAGGTCTAGCCAG
TATATAGGTTAGCACAGGGGAGTCAAGTAGTAGGGGAGGGGAGAGTTGAG
AACCTTGGCTTGGGTGAGCTCGTATTAGCCAGCCATGGTGAAAGGGGAAG
AGGCTGGGAGCAAATGCTATCGAAAAGTAAAACCGACAAGGACTCTTCTG
CTGCATGTATTTGAGGGGACCCAGTGCCCTCTCTAGTTGAATCTAGACTT
GATTGACTTTACTATTG back to topCoding sequence (CDS) from alignment at ch2:3603816..3607732+ >KJC3_002791-T2 ID=KJC3_002791-T2|Name=KJC3_002791-T2|organism=Aspergillus niger KJC3|type=CDS|length=3438bp|location=Sequence derived from alignment at ch2:3603816..3607732+ (Aspergillus niger KJC3)
ATGGCGGACGGTTTGGAGTATCTCGCTCCGGATTTTGATCTTAATTCCCT
TACCGTGCCGCGTCTGCGATCGATCCTTGTCAGCCATGATGTTCCCTACC
CTGCCTCAGCCAAAAAGGCTCAACTTATTGGTATCTTGGAGGCGGAAGTT
ATGCCGCAGGCTCGAAAGCTGCTGAGAGAGCGCGAGAGAGTCAGGAGGAC
CAGCGAGGGTATTACAGACATGGGAAGTCGCGCGACGTCAGTTGCTAGCG
ACTATGATGACTACCGCGGAACCCCGGCGAGGGATTCGATGCCACCCCCG
CCTACACCGTCTACGGTATCGACAGCCACTGGCAGAAGGGGACGTTCTAG
AGCTAGCGTTAGAGCGTCGACAGCGGACACAGAGGAAAGAAACGCTACGG
CTACTCCATCAGCGAGCTCGAGGAAATCTATCCCCAGGTCACAATCGAGA
AGATACCGCACGTCAGACACGGAGCCGCAGGAAGATATGTTGGCAACGCC
TATGGCAACTGACACCGTGACACCACGGAAGTCCACTACCAGAAAATCCA
GACGCAGCGAGATGACGCCATCTGTGAACCCCGAACCTCCCGTTTCTGCC
ATTAAACTTGAACCGAAAGAGGAAAGCGTTTTCACCGATGATAATCCCTT
CCAGAGTGGATCGCCCGCCCGTTGGGAATACAAAAGCCCGAGGCCGTCTA
GTCATAAATCGGAAAGAAAGAGCAGCTCGCGGTTTTCGCTTGAATCATCT
GCCTTGAGTAGTGGTCTGCGGTCAAGAAAGTCTGTCACGCCAGCAGATCT
GCACGATCAACAGGGTGCTACTCCATCAAAACGGTCACCATTTGAGTTGC
CCATCTCGAATATGAGAACGCCACCACAGAATTTCGATCCGATCAAGTAC
GAGGAGGATAGTGATTTTAGTGCGGGCGAGGAATTTACACCAGACGAGCA
GTTGGCGCTCGAGAGGGAGCACGCAGACTTGATGTATAGTGCCCCAAGCC
GGCGGCCACAGAAACAAGGAACTACAAGCCGCGCTGCGCCTTGGGTTATT
CTCGTCGTATTGTTCGCAAGTTTCGCTGCTTGGTGGCGTAAGGAGAAGGT
TGAGATCGGATTCTGCGGCATTGGCAAACCCACTTGGTCCTTGGCCGAAA
CCAGGGTCCCTGAATGGGCCAACATCCTTGAACCTCAATGTGAACCGTGC
CCACCCCATGCATTCTGCTACCCCAACTTTGAAGCTCGGTGTGAACACGA
CTTCTTGCTCAAGGCACACCCGCTGTCTCTGGGAGGCTTGGTTCCGCTTC
CCCCCACCTGTGAGCCAGACAGCGAGAAAGCGCGTCGCGTGAAGGCTGTC
GCAGATAAAGCCTTGGAAGCATTGCGTGATCGCAGGGCGAAGTGGGAGTG
TGGTGAGCTGGCGCAGGATGAAGAAGGCACAGTCGGTGCGGAAATTAGCG
AATCTGACTTGAAACAGGAAGTGGGGAGACAACGTCGGAAAGGCATGAGT
GACACTGAATTTGATGACCTTTGGAAGGGAGCTCTGGGCGAAGTGATTGG
GAGGGAGGAGGTTGTGACCAGAATGAAGCAAGGCGACAACATGATTACAG
ACCATCCTCTGTCCTCACCCTCACCTCGACCTCCGTCAGCCGTCTCCCTC
TCACATGCGCCTTCCGCCGCAACATCCGACTCTCTCTCGTCGCGTATCGA
TTCCCTCTTTCGATTTTAGATGGCGGACGGTTTGGAGTATCTCGCTCCGG
ATTTTGATCTTAATTCCCTTACCGTGCCGCGTCTGCGATCGATCCTTGTC
AGCCATGATGTTCCCTACCCTGCCTCAGCCAAAAAGGCTCAACTTATTGG
TATCTTGGAGGCGGAAGTTATGCCGCAGGCTCGAAAGCTGCTGAGAGAGC
GCGAGAGAGTCAGGAGGACCAGCGAGGGTATTACAGACATGGGAAGTCGC
GCGACGTCAGTTGCTAGCGACTATGATGACTACCGCGGAACCCCGGCGAG
GGATTCGATGCCACCCCCGCCTACACCGTCTACGGTATCGACAGCCACTG
GCAGAAGGGGACGTTCTAGAGCTAGCGTTAGAGCGTCGACAGCGGACACA
GAGGAAAGAAACGCTACGGCTACTCCATCAGCGAGCTCGAGGAAATCTAT
CCCCAGGTCACAATCGAGAAGATACCGCACGTCAGACACGGAGCCGCAGG
AAGATATGTTGGCAACGCCTATGGCAACTGACACCGTGACACCACGGAAG
TCCACTACCAGAAAATCCAGACGCAGCGAGATGACGCCATCTGTGAACCC
CGAACCTCCCGTTTCTGCCATTAAACTTGAACCGAAAGAGGAAAGCGTTT
TCACCGATGATAATCCCTTCCAGAGTGGATCGCCCGCCCGTTGGGAATAC
AAAAGCCCGAGGCCGTCTAGTCATAAATCGGAAAGAAAGAGCAGCTCGCG
GTTTTCGCTTGAATCATCTGCCTTGAGTAGTGGTCTGCGGTCAAGAAAGT
CTGTCACGCCAGCAGATCTGCACGATCAACAGGGTGCTACTCCATCAAAA
CGGTCACCATTTGAGTTGCCCATCTCGAATATGAGAACGCCACCACAGAA
TTTCGATCCGATCAAGTACGAGGAGGATAGTGATTTTAGTGCGGGCGAGG
AATTTACACCAGACGAGCAGTTGGCGCTCGAGAGGGAGCACGCAGACTTG
ATGTATAGTGCCCCAAGCCGGCGGCCACAGAAACAAGGAACTACAAGCCG
CGCTGCGCCTTGGGTTATTCTCGTCGTATTGTTCGCAAGTTTCGCTGCTT
GGTGGCGTAAGGAGAAGGTTGAGATCGGATTCTGCGGCATTGGCAAACCC
ACTTGGTCCTTGGCCGAAACCAGGGTCCCTGAATGGGCCAACATCCTTGA
ACCTCAATGTGAACCGTGCCCACCCCATGCATTCTGCTACCCCAACTTTG
AAGCTCGGTGTGAACACGACTTCTTGCTCAAGGCACACCCGCTGTCTCTG
GGAGGCTTGGTTCCGCTTCCCCCCACCTGTGAGCCAGACAGCGAGAAAGC
GCGTCGCGTGAAGGCTGTCGCAGATAAAGCCTTGGAAGCATTGCGTGATC
GCAGGGCGAAGTGGGAGTGTGGTGAGCTGGCGCAGGATGAAGAAGGCACA
GTCGGTGCGGAAATTAGCGAATCTGACTTGAAACAGGAAGTGGGGAGACA
ACGTCGGAAAGGCATGAGTGACACTGAATTTGATGACCTTTGGAAGGGAG
CTCTGGGCGAAGTGATTGGGAGGGAGGAGGTTGTGACCAGAATGAAGCAA
GGCGACAACATGATTACAGACCATCCTCTGTCCTCACCCTCACCTCGACC
TCCGTCAGCCGTCTCCCTCTCACATGCGCCTTCCGCCGCAACATCCGACT
CTCTCTCGTCGCGTATCGATTCCCTCTTTCGATTTTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002791-T2.utr5p1 | KJC3_002791-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002791-T2.utr3p1 | KJC3_002791-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018996 |
| DBxref | InterPro:IPR025856 |
| DBxref | PFAM:PF09402 |
| DBxref | PFAM:PF12949 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3603816..3607732 + |
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