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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3614909..3616592+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002796-T1 ID=KJC3_002796-T1|Name=KJC3_002796-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1684bp|location=Sequence derived from alignment at ch2:3614909..3616592+ (Aspergillus niger KJC3)
GTCGGTACTATGTTGCTGATACATATATAACCTCACCTTGGTCACCTAGC
ACGATTTATCCTGGATCTGCCACTCATCATTGTCACATCTCTGAACAGTA
CTACTACCGGCATAATCTATTCATCCATCCATCCATCCATCCATTCATTC
AAAAGCTCTATATCTCCCACGGACCCGTCCTCAGGATACACAAAGTGAGA
CGTCAAAATGACCACCACCGACCTCCTGCAAGAACCATGGACTCCCGTCC
ACCCCATAACCATCGCCATCATGACACTAGCCCTCACCATCTACCTACCA
CTAGTTCAACATCTCCGCTACCAGCGCAAATCAGCAATAGAAGCCCCATT
CATTACCAACAAAAGACCTCTATCAAGCATGACCATCGAAGAAGCACATA
CAATCATAACCCAATTACAAGAGCTGGAATTTCCATATGCATTCGCCAAG
GCTCGTCGGATGGCTCTCTTGAAGGTACGCACGACTGCATAGAACAAATC
TGCAACCAATAGCTAACTAGATACTAACCAGGCCGGAGGCATCCCCACCA
TGTCGAAGCTATTCGCCGTCACAGGCCAGAACAACAGACGAAACGCCGGT
AAGCGAGCCGTTGACACGGAGATTCTCCTCCGGGAGTCGCAGTCGCAGCG
GAGAGATTCAGATCGCTATGCGACTGCTGTGGCGAGGATGAATTATCTGT
ATGTGCAATATATCTTCATTAAGGTTAATGAGTTTCTGTTCTAGAATATA
CAAACTGATCACTACTTAGCCACGCCCGCTACCGTCGCGCCAACAAAATC
ACCGACGACGATCTCCTCCACACGCTAGGCGATGGACTTGCTGAGATTCT
GAACGTGATTGAGCGGGAAGAATGGCGTGGTCTCACAGACGTGGAGATAT
GTGCCCTTGGTATATTTCACAAGAATCTGGGAGAGGATATGGGGATTCCG
TATGATGTACTTCCATCTAAGGCGGAGGGGTGGGAAGACGGGGTGCAATT
TGCAATGGAGTTGACTCGCTGGACGGTACAGTATGAGGAGAGAGTTGCGA
GGTTCACGGCAACGAATGATCAGTATGTTCGTGTCTATGTGGATTCCGCA
CTTCCGGGGCTTCTTAGGCCGGTGGTGAGGCGGGTGTTGGGTGCTGGCTT
GGATGAGGTTATGAGGTTAAGTCTGGGGTGGGTTTCTCATACTCTATAAT
GCTGTCATACTGATTTATACACTGTTCACCCTGGCTAACAGCTATTATTA
GTCTCGAATCCCCGGGATACATCTTATCATTCGTGATCAACTTCGTGCAA
GCCTCACGAAAACTATTCCTTCAATACCTGGCCCTTCCGCGCCCTTCTTT
CCATGCCGTCAAACTAGTGCACGATCTGCCGAACCAGAAGACGAATTTAT
ATAACTTTGAAAGAAAGGTCTTGCAGCCATGGTATATTCGTCCAACTGTG
TGGTCGAAATATGGCCCTGGGGCATTGCTGATTAGATTGTTCGGAGGCAA
GGTGCCTGGCTCACGTGGAGATCGGTATCAGCCACAAGGATACGATTTGA
TGACTATTGGGCCGGAGCCACAGAAGGGAAGAGGGTTGGAGGAGATGAGA
GGTGATATTGAGGTGATTAAGGCGAGGGGGATGGCGACGTGTCCGTTTTC
GAAGGCGAAATGGGATCATCATGATGCAAATTGA back to topCoding sequence (CDS) from alignment at ch2:3614909..3616592+ >KJC3_002796-T1 ID=KJC3_002796-T1|Name=KJC3_002796-T1|organism=Aspergillus niger KJC3|type=CDS|length=5100bp|location=Sequence derived from alignment at ch2:3614909..3616592+ (Aspergillus niger KJC3)
ATGACCACCACCGACCTCCTGCAAGAACCATGGACTCCCGTCCACCCCAT
AACCATCGCCATCATGACACTAGCCCTCACCATCTACCTACCACTAGTTC
AACATCTCCGCTACCAGCGCAAATCAGCAATAGAAGCCCCATTCATTACC
AACAAAAGACCTCTATCAAGCATGACCATCGAAGAAGCACATACAATCAT
AACCCAATTACAAGAGCTGGAATTTCCATATGCATTCGCCAAGGCTCGTC
GGATGGCTCTCTTGAAGGCCGGAGGCATCCCCACCATGTCGAAGCTATTC
GCCGTCACAGGCCAGAACAACAGACGAAACGCCGGTAAGCGAGCCGTTGA
CACGGAGATTCTCCTCCGGGAGTCGCAGTCGCAGCGGAGAGATTCAGATC
GCTATGCGACTGCTGTGGCGAGGATGAATTATCTCCACGCCCGCTACCGT
CGCGCCAACAAAATCACCGACGACGATCTCCTCCACACGCTAGGCGATGG
ACTTGCTGAGATTCTGAACGTGATTGAGCGGGAAGAATGGCGTGGTCTCA
CAGACGTGGAGATATGTGCCCTTGGTATATTTCACAAGAATCTGGGAGAG
GATATGGGGATTCCGTATGATGTACTTCCATCTAAGGCGGAGGGGTGGGA
AGACGGGGTGCAATTTGCAATGGAGTTGACTCGCTGGACGGTACAGTATG
AGGAGAGAGTTGCGAGGTTCACGGCAACGAATGATCAGTATGTTCGTGTC
TATGTGGATTCCGCACTTCCGGGGCTTCTTAGGCCGGTGGTGAGGCGGGT
GTTGGGTGCTGGCTTGGATGAGGTTATGAGGTTAAGTCTGGGTCTCGAAT
CCCCGGGATACATCTTATCATTCGTGATCAACTTCGTGCAAGCCTCACGA
AAACTATTCCTTCAATACCTGGCCCTTCCGCGCCCTTCTTTCCATGCCGT
CAAACTAGTGCACGATCTGCCGAACCAGAAGACGAATTTATATAACTTTG
AAAGAAAGGTCTTGCAGCCATGGTATATTCGTCCAACTGTGTGGTCGAAA
TATGGCCCTGGGGCATTGCTGATTAGATTGTTCGGAGGCAAGGTGCCTGG
CTCACGTGGAGATCGGTATCAGCCACAAGGATACGATTTGATGACTATTG
GGCCGGAGCCACAGAAGGGAAGAGGGTTGGAGGAGATGAGAGGTGATATT
GAGGTGATTAAGGCGAGGGGGATGGCGACGTGTCCGTTTTCGAAGGCGAA
ATGGGATCATCATGATGCAAATTGAATGACCACCACCGACCTCCTGCAAG
AACCATGGACTCCCGTCCACCCCATAACCATCGCCATCATGACACTAGCC
CTCACCATCTACCTACCACTAGTTCAACATCTCCGCTACCAGCGCAAATC
AGCAATAGAAGCCCCATTCATTACCAACAAAAGACCTCTATCAAGCATGA
CCATCGAAGAAGCACATACAATCATAACCCAATTACAAGAGCTGGAATTT
CCATATGCATTCGCCAAGGCTCGTCGGATGGCTCTCTTGAAGGCCGGAGG
CATCCCCACCATGTCGAAGCTATTCGCCGTCACAGGCCAGAACAACAGAC
GAAACGCCGGTAAGCGAGCCGTTGACACGGAGATTCTCCTCCGGGAGTCG
CAGTCGCAGCGGAGAGATTCAGATCGCTATGCGACTGCTGTGGCGAGGAT
GAATTATCTCCACGCCCGCTACCGTCGCGCCAACAAAATCACCGACGACG
ATCTCCTCCACACGCTAGGCGATGGACTTGCTGAGATTCTGAACGTGATT
GAGCGGGAAGAATGGCGTGGTCTCACAGACGTGGAGATATGTGCCCTTGG
TATATTTCACAAGAATCTGGGAGAGGATATGGGGATTCCGTATGATGTAC
TTCCATCTAAGGCGGAGGGGTGGGAAGACGGGGTGCAATTTGCAATGGAG
TTGACTCGCTGGACGGTACAGTATGAGGAGAGAGTTGCGAGGTTCACGGC
AACGAATGATCAGTATGTTCGTGTCTATGTGGATTCCGCACTTCCGGGGC
TTCTTAGGCCGGTGGTGAGGCGGGTGTTGGGTGCTGGCTTGGATGAGGTT
ATGAGGTTAAGTCTGGGTCTCGAATCCCCGGGATACATCTTATCATTCGT
GATCAACTTCGTGCAAGCCTCACGAAAACTATTCCTTCAATACCTGGCCC
TTCCGCGCCCTTCTTTCCATGCCGTCAAACTAGTGCACGATCTGCCGAAC
CAGAAGACGAATTTATATAACTTTGAAAGAAAGGTCTTGCAGCCATGGTA
TATTCGTCCAACTGTGTGGTCGAAATATGGCCCTGGGGCATTGCTGATTA
GATTGTTCGGAGGCAAGGTGCCTGGCTCACGTGGAGATCGGTATCAGCCA
CAAGGATACGATTTGATGACTATTGGGCCGGAGCCACAGAAGGGAAGAGG
GTTGGAGGAGATGAGAGGTGATATTGAGGTGATTAAGGCGAGGGGGATGG
CGACGTGTCCGTTTTCGAAGGCGAAATGGGATCATCATGATGCAAATTGA
ATGACCACCACCGACCTCCTGCAAGAACCATGGACTCCCGTCCACCCCAT
AACCATCGCCATCATGACACTAGCCCTCACCATCTACCTACCACTAGTTC
AACATCTCCGCTACCAGCGCAAATCAGCAATAGAAGCCCCATTCATTACC
AACAAAAGACCTCTATCAAGCATGACCATCGAAGAAGCACATACAATCAT
AACCCAATTACAAGAGCTGGAATTTCCATATGCATTCGCCAAGGCTCGTC
GGATGGCTCTCTTGAAGGCCGGAGGCATCCCCACCATGTCGAAGCTATTC
GCCGTCACAGGCCAGAACAACAGACGAAACGCCGGTAAGCGAGCCGTTGA
CACGGAGATTCTCCTCCGGGAGTCGCAGTCGCAGCGGAGAGATTCAGATC
GCTATGCGACTGCTGTGGCGAGGATGAATTATCTCCACGCCCGCTACCGT
CGCGCCAACAAAATCACCGACGACGATCTCCTCCACACGCTAGGCGATGG
ACTTGCTGAGATTCTGAACGTGATTGAGCGGGAAGAATGGCGTGGTCTCA
CAGACGTGGAGATATGTGCCCTTGGTATATTTCACAAGAATCTGGGAGAG
GATATGGGGATTCCGTATGATGTACTTCCATCTAAGGCGGAGGGGTGGGA
AGACGGGGTGCAATTTGCAATGGAGTTGACTCGCTGGACGGTACAGTATG
AGGAGAGAGTTGCGAGGTTCACGGCAACGAATGATCAGTATGTTCGTGTC
TATGTGGATTCCGCACTTCCGGGGCTTCTTAGGCCGGTGGTGAGGCGGGT
GTTGGGTGCTGGCTTGGATGAGGTTATGAGGTTAAGTCTGGGTCTCGAAT
CCCCGGGATACATCTTATCATTCGTGATCAACTTCGTGCAAGCCTCACGA
AAACTATTCCTTCAATACCTGGCCCTTCCGCGCCCTTCTTTCCATGCCGT
CAAACTAGTGCACGATCTGCCGAACCAGAAGACGAATTTATATAACTTTG
AAAGAAAGGTCTTGCAGCCATGGTATATTCGTCCAACTGTGTGGTCGAAA
TATGGCCCTGGGGCATTGCTGATTAGATTGTTCGGAGGCAAGGTGCCTGG
CTCACGTGGAGATCGGTATCAGCCACAAGGATACGATTTGATGACTATTG
GGCCGGAGCCACAGAAGGGAAGAGGGTTGGAGGAGATGAGAGGTGATATT
GAGGTGATTAAGGCGAGGGGGATGGCGACGTGTCCGTTTTCGAAGGCGAA
ATGGGATCATCATGATGCAAATTGAATGACCACCACCGACCTCCTGCAAG
AACCATGGACTCCCGTCCACCCCATAACCATCGCCATCATGACACTAGCC
CTCACCATCTACCTACCACTAGTTCAACATCTCCGCTACCAGCGCAAATC
AGCAATAGAAGCCCCATTCATTACCAACAAAAGACCTCTATCAAGCATGA
CCATCGAAGAAGCACATACAATCATAACCCAATTACAAGAGCTGGAATTT
CCATATGCATTCGCCAAGGCTCGTCGGATGGCTCTCTTGAAGGCCGGAGG
CATCCCCACCATGTCGAAGCTATTCGCCGTCACAGGCCAGAACAACAGAC
GAAACGCCGGTAAGCGAGCCGTTGACACGGAGATTCTCCTCCGGGAGTCG
CAGTCGCAGCGGAGAGATTCAGATCGCTATGCGACTGCTGTGGCGAGGAT
GAATTATCTCCACGCCCGCTACCGTCGCGCCAACAAAATCACCGACGACG
ATCTCCTCCACACGCTAGGCGATGGACTTGCTGAGATTCTGAACGTGATT
GAGCGGGAAGAATGGCGTGGTCTCACAGACGTGGAGATATGTGCCCTTGG
TATATTTCACAAGAATCTGGGAGAGGATATGGGGATTCCGTATGATGTAC
TTCCATCTAAGGCGGAGGGGTGGGAAGACGGGGTGCAATTTGCAATGGAG
TTGACTCGCTGGACGGTACAGTATGAGGAGAGAGTTGCGAGGTTCACGGC
AACGAATGATCAGTATGTTCGTGTCTATGTGGATTCCGCACTTCCGGGGC
TTCTTAGGCCGGTGGTGAGGCGGGTGTTGGGTGCTGGCTTGGATGAGGTT
ATGAGGTTAAGTCTGGGTCTCGAATCCCCGGGATACATCTTATCATTCGT
GATCAACTTCGTGCAAGCCTCACGAAAACTATTCCTTCAATACCTGGCCC
TTCCGCGCCCTTCTTTCCATGCCGTCAAACTAGTGCACGATCTGCCGAAC
CAGAAGACGAATTTATATAACTTTGAAAGAAAGGTCTTGCAGCCATGGTA
TATTCGTCCAACTGTGTGGTCGAAATATGGCCCTGGGGCATTGCTGATTA
GATTGTTCGGAGGCAAGGTGCCTGGCTCACGTGGAGATCGGTATCAGCCA
CAAGGATACGATTTGATGACTATTGGGCCGGAGCCACAGAAGGGAAGAGG
GTTGGAGGAGATGAGAGGTGATATTGAGGTGATTAAGGCGAGGGGGATGG
CGACGTGTCCGTTTTCGAAGGCGAAATGGGATCATCATGATGCAAATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002796-T1.utr5p1 | KJC3_002796-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3614909..3616592 + |
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