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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3629328..3630403- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002804-T1 ID=KJC3_002804-T1|Name=KJC3_002804-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1076bp|location=Sequence derived from alignment at ch2:3629328..3630403- (Aspergillus niger KJC3)
CGTATATACAAAATCCGACTACATCATGAATACCTGAAATAAACAGCAGC
TTCAGCACCGCAACCTCAATGCAACAATCAATCAGTCAATCACTCAATCC
ATTTCACATCATAAACCAACTATCTACAACCAACCACACAATGTCCCCCA
AACTCCTCACCATCCTCCCTGCCACCAGCCAACAAGGCCTCTCCATCATC
TCCGCCATAACGCACCACCCAACCCTCCATAGCTTATACACCCTCCGCGC
CCTAGTCCGCAATCCATCCTCTTCCACAGCTCAATCCCTCACCGCGCAAG
GCATCAAAGTCCTCCCCGCGGACCTCAACGACCCTCGCACCCTCATCCCA
GCCCTAACCAACACGCACACCCTAATCCTCATAACCCAAACGGACTACTC
AGCCCCGGACCTCAAACACCAAGAACTCACCCAAGTCCAGAACATCATTT
CCGCATGTCTCGCCACTACCAATACCATCAAACACATCATCTTCAGCAGC
GCTGTGCCCGCCCATCCGCACGGGCGGAAAGTGGATGTCTTCGACTCGAA
GGTCGCGGCTGAGGAGGCATTACGTACACTAACTTTATCCCATGACGTAG
TAGTGTCAGTGTTCTATCCCGGGATGTTCATGCAGAATTTCGAGACATTC
ATGAGGCCTGTTCCTGATCCCGAGGGACAGGGGGACTTGGTTTTGTATAA
TGTCATTGATGGGGAGAAGAAGATACCTTTGATTGATACGGTGAGGGATC
TGGGAAAGTTTGTGGTTCCGATTCTGATGGGGGATACTGAAAGGGTTTAT
GCTGCTAATGGGGTTTGGTCGTTTGAGGAGGTGGTGGAGGTTATAGGGAG
GGTGACGGGGAAGAGGGTGAGGTATTTGAGGATGGAAGAGGAGGTGTATG
CGGGTTTCATGCCGGGACAGATGGGGAGGCAGGTGGTGGATATGTTGAGT
TTTTATGGGGAGGTTGGGTATTATGGGGGAGATGAGGAGGGGAAGGTTAG
AGAGACGCTGGGGTTGGTAGAGGGGAGTAGGGGATTTGAGGAGTTTGCGA
AGGAGAAATTGCTCAAGTTGGAGTAA back to topCoding sequence (CDS) from alignment at ch2:3629328..3630403- >KJC3_002804-T1 ID=KJC3_002804-T1|Name=KJC3_002804-T1|organism=Aspergillus niger KJC3|type=CDS|length=1008bp|location=Sequence derived from alignment at ch2:3629328..3630403- (Aspergillus niger KJC3)
ATGCAACAATCAATCAGTCAATCACTCAATCCATTTCACATCATAAACCA
ACTATCTACAACCAACCACACAATGTCCCCCAAACTCCTCACCATCCTCC
CTGCCACCAGCCAACAAGGCCTCTCCATCATCTCCGCCATAACGCACCAC
CCAACCCTCCATAGCTTATACACCCTCCGCGCCCTAGTCCGCAATCCATC
CTCTTCCACAGCTCAATCCCTCACCGCGCAAGGCATCAAAGTCCTCCCCG
CGGACCTCAACGACCCTCGCACCCTCATCCCAGCCCTAACCAACACGCAC
ACCCTAATCCTCATAACCCAAACGGACTACTCAGCCCCGGACCTCAAACA
CCAAGAACTCACCCAAGTCCAGAACATCATTTCCGCATGTCTCGCCACTA
CCAATACCATCAAACACATCATCTTCAGCAGCGCTGTGCCCGCCCATCCG
CACGGGCGGAAAGTGGATGTCTTCGACTCGAAGGTCGCGGCTGAGGAGGC
ATTACGTACACTAACTTTATCCCATGACGTAGTAGTGTCAGTGTTCTATC
CCGGGATGTTCATGCAGAATTTCGAGACATTCATGAGGCCTGTTCCTGAT
CCCGAGGGACAGGGGGACTTGGTTTTGTATAATGTCATTGATGGGGAGAA
GAAGATACCTTTGATTGATACGGTGAGGGATCTGGGAAAGTTTGTGGTTC
CGATTCTGATGGGGGATACTGAAAGGGTTTATGCTGCTAATGGGGTTTGG
TCGTTTGAGGAGGTGGTGGAGGTTATAGGGAGGGTGACGGGGAAGAGGGT
GAGGTATTTGAGGATGGAAGAGGAGGTGTATGCGGGTTTCATGCCGGGAC
AGATGGGGAGGCAGGTGGTGGATATGTTGAGTTTTTATGGGGAGGTTGGG
TATTATGGGGGAGATGAGGAGGGGAAGGTTAGAGAGACGCTGGGGTTGGT
AGAGGGGAGTAGGGGATTTGAGGAGTTTGCGAAGGAGAAATTGCTCAAGT
TGGAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002804-T1.utr5p1 | KJC3_002804-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| DBxref | PFAM:PF13460 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3629328..3630403 - |
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