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KJC3_002807-T1, KJC3_002807-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002807-T1
Unique NameKJC3_002807-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3633930..3636212-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002807-T1 ID=KJC3_002807-T1|Name=KJC3_002807-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2283bp|location=Sequence derived from alignment at ch2:3633930..3636212- (Aspergillus niger KJC3)
GGCTTTGCTTTCTGGAGGAGCTGCGGCTGTGTTTGCTTTGCTTGTCTTGC
TTTCTCCTCCAAGGGGCTGTTCCTCATCCCTCCTCAGCTGGTTCCTGTCC
TTCTTTCCCTCTTGTTGGTGCTGCTACTCTTCTCTGTTGCTGCTCCGTGG
TTGGCACCGCCTTCGTTTCACACACTCCCTGGTCTCTGCTTGGTGCCGCT
AAGTCGTTTCCTTATCGCCCAAACCACCCCCCCAGTCATTCCACACGGCT
GCGTGCCTTGACTACTAGTGCACCTGTCACATTGTTTGGTTTCTGCAACA
AAAGGTGCATACCACCACTACCCAAACCCATCCTTCCCGCTCATTGCCCC
AGCTCCGGTCCCCAAGCTATAGCGCTTGCATTCCCAAACATGATAACTGA
CAAATCAGTAATTTCCTAGATCATTCTCTCCTCCCCTTTGTCATCGTCTG
ATTTTGTTCCGTTGGATGGGTTCCGGGAAACCGGTGCTGTGATCCCAAAT
CCTCAAATTCGGTTGGTCTCAGCATCCCCGCTCCACCGGACTTCGACCGT
GTTTACGCCTGGGACTAATCCACACCACCCACAGATACCATCCGAACCCA
ACATCTGTTATCCAAATATGGATGCGTCACAACTGCCCGTGGCCGGCACT
TCGGATGTCGCAAATCAGGCGCATCTGGAGCAATCCCAGAGCCTCGATAC
ACCCGCTCCCGCAAGCCTCGGACTGGCGGGACCAGACGAGTTCACAAGCA
CAAATGGCTACAGTAGCGACTCGCGCGCCCACTACTCCTCCCACGAATTC
AACTCTCCGGCTCGCGATTTCCACAATGAGAACGATCAACCTCGACAGAA
CTTCTCCCCGCTGACCCATCAGCCACAACCGTTATCGTCATCCCGGCCCA
GCTCCGAAATGTCCACCAGCCTGCCTCAGCCTACGCACGATGTCAGCCAA
AAGCAGCCGTCGCAGTCAACCAAGAACAGCGTGGTGATCAAGGTGGGTAT
GGTCGGAGATGCCCAGATCGGAAAAACCAGTTTAATGGTGAAATATGTGG
AAGGTAGTTGGGACGAGGATTATATCCAGACTCTCGGTATGCAGCGGATT
CTTTGCGCGGTTAGGAATAAATAATGCTGACCGCGATCTTAAGGTGTCAA
CTTCATGGAGAAGACCATCTCCATTCGGAACACGGAGATTACGTTCTCGA
TTTGGGATCTGGGTGGCCAACGTGAATTCGTCAACATGCTTCCCCTTGTG
TGCAACGATGCTGTCGCCATTCTGTTCATGTTCGATCTCACGCGGAAAAG
CACTCTGAACTCAATTAAGGAATGGTACCGACAAGGTCGTGGGTTCAACA
AGACTGCCATCCCCTTCCTGATCGGTACCAAATATGACCATTTCGTCAAC
TTTCCCCGCGAAGACCAGGAAGAGATCTCGATTCAGGTAGGCGAGAATGC
ATATGAGGTGTCTTAGCGCGCACTGACCACCTATAGGCGAAACGGTTTGC
CAAGGCCATGAAAGCTAGTTTAATTTTTAGCAGTACGAGTCACAGCATCA
ACGTGCAGAAGGTATGTCCCGATGTGTGAAGTTATACCCTGTTGCTAGTG
TTGACAGCGTGATAGATCTTCAAGATCGTCTTGGCCAAGGCTTTTGACCT
CAAGTGCACGATTCCCGAGATCGAAAATGTTGGCGAACCCCTGCTACTGT
ATAAGAACGTCTGAGTCACGACCAAATGAGTGGGATGAACGATTACGTAT
AAGGGACGACGTGATGTTGATGATCGAACTTTCCCTACTTTGGGCTGTAG
GATATCGTGATCTGGTGCCAAGTCCTGGGGATCAGAAGCGACTGGTCTGT
TGGTGTCCTCGCTACTTTCTTTGTCTATTTCCGTCTGTGTCTTTTCCTCA
TAAGCATTGGGATGCGCTAGGATTTCCTTCGTGTTGATCACTTCTCTTTG
TTCTTCCATTTTTCTTTCGCTTTCATTGTGTTAAATTCCCCACATTGTTT
CTACTTTTCTCTTCTTTGAGCCCGTCGGCTGCGGGTTGACGAGTCACATT
GGCGGACCTGCGGCGATGGAGCAGGAGTGCTCGGTTACGGCATTGGCCTG
ATATATTTCTTTTTCTCCTATTTCTTTTTTCTACTCCATGTCATTACAGC
CACAGTGGGTACTGTTTCCTATGTTCAGATAGCTCTAATGTGACCTGAGG
TGCTATTTGCCTCGGCAAGATTACATATTTATACAGGATCTTCCACTTCT
TGGGGGTGCTGCACCTTAATAATCAAAGATAGA
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Coding sequence (CDS) from alignment at ch2:3633930..3636212-

>KJC3_002807-T1 ID=KJC3_002807-T1|Name=KJC3_002807-T1|organism=Aspergillus niger KJC3|type=CDS|length=3744bp|location=Sequence derived from alignment at ch2:3633930..3636212- (Aspergillus niger KJC3)
ATCTTCAAGATCGTCTTGGCCAAGGCTTTTGACCTCAAGTGCACGATTCC
CGAGATCGAAAATGTTGGCGAACCCCTGCTACTGTATAAGAACGTCTGAG
CGAAACGGTTTGCCAAGGCCATGAAAGCTAGTTTAATTTTTAGCAGTACG
AGTCACAGCATCAACGTGCAGAAGGTGTCAACTTCATGGAGAAGACCATC
TCCATTCGGAACACGGAGATTACGTTCTCGATTTGGGATCTGGGTGGCCA
ACGTGAATTCGTCAACATGCTTCCCCTTGTGTGCAACGATGCTGTCGCCA
TTCTGTTCATGTTCGATCTCACGCGGAAAAGCACTCTGAACTCAATTAAG
GAATGGTACCGACAAGGTCGTGGGTTCAACAAGACTGCCATCCCCTTCCT
GATCGGTACCAAATATGACCATTTCGTCAACTTTCCCCGCGAAGACCAGG
AAGAGATCTCGATTCAGATGGATGCGTCACAACTGCCCGTGGCCGGCACT
TCGGATGTCGCAAATCAGGCGCATCTGGAGCAATCCCAGAGCCTCGATAC
ACCCGCTCCCGCAAGCCTCGGACTGGCGGGACCAGACGAGTTCACAAGCA
CAAATGGCTACAGTAGCGACTCGCGCGCCCACTACTCCTCCCACGAATTC
AACTCTCCGGCTCGCGATTTCCACAATGAGAACGATCAACCTCGACAGAA
CTTCTCCCCGCTGACCCATCAGCCACAACCGTTATCGTCATCCCGGCCCA
GCTCCGAAATGTCCACCAGCCTGCCTCAGCCTACGCACGATGTCAGCCAA
AAGCAGCCGTCGCAGTCAACCAAGAACAGCGTGGTGATCAAGGTGGGTAT
GGTCGGAGATGCCCAGATCGGAAAAACCAGTTTAATGGTGAAATATGTGG
AAGGTAGTTGGGACGAGGATTATATCCAGACTCTCGATCTTCAAGATCGT
CTTGGCCAAGGCTTTTGACCTCAAGTGCACGATTCCCGAGATCGAAAATG
TTGGCGAACCCCTGCTACTGTATAAGAACGTCTGAGCGAAACGGTTTGCC
AAGGCCATGAAAGCTAGTTTAATTTTTAGCAGTACGAGTCACAGCATCAA
CGTGCAGAAGGTGTCAACTTCATGGAGAAGACCATCTCCATTCGGAACAC
GGAGATTACGTTCTCGATTTGGGATCTGGGTGGCCAACGTGAATTCGTCA
ACATGCTTCCCCTTGTGTGCAACGATGCTGTCGCCATTCTGTTCATGTTC
GATCTCACGCGGAAAAGCACTCTGAACTCAATTAAGGAATGGTACCGACA
AGGTCGTGGGTTCAACAAGACTGCCATCCCCTTCCTGATCGGTACCAAAT
ATGACCATTTCGTCAACTTTCCCCGCGAAGACCAGGAAGAGATCTCGATT
CAGATGGATGCGTCACAACTGCCCGTGGCCGGCACTTCGGATGTCGCAAA
TCAGGCGCATCTGGAGCAATCCCAGAGCCTCGATACACCCGCTCCCGCAA
GCCTCGGACTGGCGGGACCAGACGAGTTCACAAGCACAAATGGCTACAGT
AGCGACTCGCGCGCCCACTACTCCTCCCACGAATTCAACTCTCCGGCTCG
CGATTTCCACAATGAGAACGATCAACCTCGACAGAACTTCTCCCCGCTGA
CCCATCAGCCACAACCGTTATCGTCATCCCGGCCCAGCTCCGAAATGTCC
ACCAGCCTGCCTCAGCCTACGCACGATGTCAGCCAAAAGCAGCCGTCGCA
GTCAACCAAGAACAGCGTGGTGATCAAGGTGGGTATGGTCGGAGATGCCC
AGATCGGAAAAACCAGTTTAATGGTGAAATATGTGGAAGGTAGTTGGGAC
GAGGATTATATCCAGACTCTCGATCTTCAAGATCGTCTTGGCCAAGGCTT
TTGACCTCAAGTGCACGATTCCCGAGATCGAAAATGTTGGCGAACCCCTG
CTACTGTATAAGAACGTCTGAGCGAAACGGTTTGCCAAGGCCATGAAAGC
TAGTTTAATTTTTAGCAGTACGAGTCACAGCATCAACGTGCAGAAGGTGT
CAACTTCATGGAGAAGACCATCTCCATTCGGAACACGGAGATTACGTTCT
CGATTTGGGATCTGGGTGGCCAACGTGAATTCGTCAACATGCTTCCCCTT
GTGTGCAACGATGCTGTCGCCATTCTGTTCATGTTCGATCTCACGCGGAA
AAGCACTCTGAACTCAATTAAGGAATGGTACCGACAAGGTCGTGGGTTCA
ACAAGACTGCCATCCCCTTCCTGATCGGTACCAAATATGACCATTTCGTC
AACTTTCCCCGCGAAGACCAGGAAGAGATCTCGATTCAGATGGATGCGTC
ACAACTGCCCGTGGCCGGCACTTCGGATGTCGCAAATCAGGCGCATCTGG
AGCAATCCCAGAGCCTCGATACACCCGCTCCCGCAAGCCTCGGACTGGCG
GGACCAGACGAGTTCACAAGCACAAATGGCTACAGTAGCGACTCGCGCGC
CCACTACTCCTCCCACGAATTCAACTCTCCGGCTCGCGATTTCCACAATG
AGAACGATCAACCTCGACAGAACTTCTCCCCGCTGACCCATCAGCCACAA
CCGTTATCGTCATCCCGGCCCAGCTCCGAAATGTCCACCAGCCTGCCTCA
GCCTACGCACGATGTCAGCCAAAAGCAGCCGTCGCAGTCAACCAAGAACA
GCGTGGTGATCAAGGTGGGTATGGTCGGAGATGCCCAGATCGGAAAAACC
AGTTTAATGGTGAAATATGTGGAAGGTAGTTGGGACGAGGATTATATCCA
GACTCTCGATCTTCAAGATCGTCTTGGCCAAGGCTTTTGACCTCAAGTGC
ACGATTCCCGAGATCGAAAATGTTGGCGAACCCCTGCTACTGTATAAGAA
CGTCTGAGCGAAACGGTTTGCCAAGGCCATGAAAGCTAGTTTAATTTTTA
GCAGTACGAGTCACAGCATCAACGTGCAGAAGGTGTCAACTTCATGGAGA
AGACCATCTCCATTCGGAACACGGAGATTACGTTCTCGATTTGGGATCTG
GGTGGCCAACGTGAATTCGTCAACATGCTTCCCCTTGTGTGCAACGATGC
TGTCGCCATTCTGTTCATGTTCGATCTCACGCGGAAAAGCACTCTGAACT
CAATTAAGGAATGGTACCGACAAGGTCGTGGGTTCAACAAGACTGCCATC
CCCTTCCTGATCGGTACCAAATATGACCATTTCGTCAACTTTCCCCGCGA
AGACCAGGAAGAGATCTCGATTCAGATGGATGCGTCACAACTGCCCGTGG
CCGGCACTTCGGATGTCGCAAATCAGGCGCATCTGGAGCAATCCCAGAGC
CTCGATACACCCGCTCCCGCAAGCCTCGGACTGGCGGGACCAGACGAGTT
CACAAGCACAAATGGCTACAGTAGCGACTCGCGCGCCCACTACTCCTCCC
ACGAATTCAACTCTCCGGCTCGCGATTTCCACAATGAGAACGATCAACCT
CGACAGAACTTCTCCCCGCTGACCCATCAGCCACAACCGTTATCGTCATC
CCGGCCCAGCTCCGAAATGTCCACCAGCCTGCCTCAGCCTACGCACGATG
TCAGCCAAAAGCAGCCGTCGCAGTCAACCAAGAACAGCGTGGTGATCAAG
GTGGGTATGGTCGGAGATGCCCAGATCGGAAAAACCAGTTTAATGGTGAA
ATATGTGGAAGGTAGTTGGGACGAGGATTATATCCAGACTCTCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005525GTP binding
GO:0003924GTPase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
SPG1KJC3_002807Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002807-T1KJC3_002807-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002807-T1.cdsKJC3_002807-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002807-T1.utr3p1KJC3_002807-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002807-T1.exon4KJC3_002807-T1.exon4Aspergillus niger KJC3exon
KJC3_002807-T1.exon3KJC3_002807-T1.exon3Aspergillus niger KJC3exon
KJC3_002807-T1.exon2KJC3_002807-T1.exon2Aspergillus niger KJC3exon
KJC3_002807-T1.exon1KJC3_002807-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002807-T1.utr5p1KJC3_002807-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092644X6
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR017231
DBxrefInterPro:IPR005225
DBxrefInterPro:IPR001806
DBxrefPFAM:PF08477
DBxrefPFAM:PF00071
DBxrefPFAM:PF04670
DBxrefPFAM:PF00025
Productseptum-promoting GTP-binding protein 1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3633930..3636212 -
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