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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3663488..3665195+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002817-T1 ID=KJC3_002817-T1|Name=KJC3_002817-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1708bp|location=Sequence derived from alignment at ch2:3663488..3665195+ (Aspergillus niger KJC3)
CACAGCCTCTCACCTTCGAGTTACTACTACTGCCTACTGCTCACACTCGT
GTTTATGCGTCCATGTGTCGAATGATGTATTGATACCCTATCCAACATAC
TACTAACCTACCCACTTTACGAGTTTATGGTTGTTACTGCTAGTTAAAGT
TCTGAAGTTACGAGGATATACCTGGTTTCCATTGTACTTTCTTCTTTCTT
TTTCTTGACGGTTTGGTGCACTGGTGGTGTGTATAGCACCCCAACGGTGC
TGCGTTCAGATGATATGATGCCCACTCAAAGCCACCTCAATTCCTATACG
CGCTATTCGCTCCTCGTCCTGGGATTACTCCTGCATGCACATGTACCGCT
CGTAGCGGGTGATGATAACTCTAATTGTGAGTTGTATCTCTAACCCTTCT
TTTCATGGAAGCCCCAGGCAACTAACGAGTGGATGATGATGTGGTGATGC
ATAGGCTCCTCCACCTCAACAATATCCTCCCAATCTGATGCCGACTCGCT
CTCCTCCTGCGATACCCTCTCCGGCACCCTGACTATCTCCACTTCTGCGA
CAGGCAGTATCTCGCTCTCCAATGTCGAGACCATTAACGGTGGGATTACC
ATCCAGGATGTATCGGGGTTAACGTCTTTCTCGGCTTCGGATTTACAGAA
AGTGAACGGGAAGATCTATATTTCTGGGAATGATGACTTGACAAATTTGT
CATTTCCGGATTTGGAAAAGGTTCCGGGGGAGATTGATATAGAAGGGAAT
AGCAAGTTAAGGGATATTGTATTCCCGGATTTGAAGAATGTCGATGGGGC
CTTGATTTTGGAGGGGAGTTTTAATGAGTGGGTCTCCCAATTCCTTTTCT
TCGTGGGGAGGATATTCATTTAACGGTTGGGACAGGATCAAATTTGAGGA
CCTCGATAAGGTCAAAGGACAAACAACTATTCACTCCCATGGCGGATCAT
TTCGATGCTCGAGTCTCAATTCTCTTCGTGATGGTGATGATGACGATGAC
GATGATAACAATACTCGCCGTCGCCGCGACAATAACAACAACAATAACAA
CGGCGCCTTTCAAGGCGCGTACACCTGCACCGACAGTTCCAGCAGCGGAC
TCAGTGCGGGCGCCAAAGCCGGTATTGCCATTGCTGTGATTGTACTCGTC
CTTCTCATCCTTGTTGGTGTGTGGATGATGTATCGGAAACAGCGAAAACG
GCGCAGAAGACGGAATGATGATCAAAGCCAGATGATGTATACGCCTGTTG
GGGTCGGTCTTCGTGGTGGCGGTGGTAGTAGTAATCGAGACGAAGAATCT
TCAGCTGGTGATGAGAAGCCTGTCACTGGAGTGCCGAATCCTGCCGTTCT
GAGGCAGAATAGTGACTCGGTCAATGCGCTTAGTGCCATCCCCCGGAAAC
CGATTTCGCCGCCACCGCCATCGAACGAGATGAATAGGGAATCTATGGTG
TCCATGTCGACGTCTCCGCCCCTCCCTGCTGCGTTGGTCCCAGGAGATCG
CTCGTCTGCGTCGCCGCCGAATGATGCGGATGGACGATCGTTGTTCCTGC
ATCCGATCCCCCGGAGGCGACCGTCGGAGACAGATGTGCCGTTGCTGGAT
AGTGGTGACGTGCATGAGGCGCCCGGAAGTCCAGTACAACGGCCGACATT
TGAGCTAGATGCAGGGCCCGTGCGAGGAATGCATCAACAACCTATTCATC
ATGAGTAG back to topCoding sequence (CDS) from alignment at ch2:3663488..3665195+ >KJC3_002817-T1 ID=KJC3_002817-T1|Name=KJC3_002817-T1|organism=Aspergillus niger KJC3|type=CDS|length=3924bp|location=Sequence derived from alignment at ch2:3663488..3665195+ (Aspergillus niger KJC3)
ATGATGCCCACTCAAAGCCACCTCAATTCCTATACGCGCTATTCGCTCCT
CGTCCTGGGATTACTCCTGCATGCACATGTACCGCTCGTAGCGGGTGATG
ATAACTCTAATTGCTCCTCCACCTCAACAATATCCTCCCAATCTGATGCC
GACTCGCTCTCCTCCTGCGATACCCTCTCCGGCACCCTGACTATCTCCAC
TTCTGCGACAGGCAGTATCTCGCTCTCCAATGTCGAGACCATTAACGGTG
GGATTACCATCCAGGATGTATCGGGGTTAACGTCTTTCTCGGCTTCGGAT
TTACAGAAAGTGAACGGGAAGATCTATATTTCTGGGAATGATGACTTGAC
AAATTTGTCATTTCCGGATTTGGAAAAGGTTCCGGGGGAGATTGATATAG
AAGGGAATAGCAAGTTAAGGGATATTGTATTCCCGGATTTGAAGAATGTC
GATGGGGCCTTGATTTTGGAGGGGAGTTTTAATGAGATCAAATTTGAGGA
CCTCGATAAGGTCAAAGGACAAACAACTATTCACTCCCATGGCGGATCAT
TTCGATGCTCGAGTCTCAATTCTCTTCGTGATGGTGATGATGACGATGAC
GATGATAACAATACTCGCCGTCGCCGCGACAATAACAACAACAATAACAA
CGGCGCCTTTCAAGGCGCGTACACCTGCACCGACAGTTCCAGCAGCGGAC
TCAGTGCGGGCGCCAAAGCCGGTATTGCCATTGCTGTGATTGTACTCGTC
CTTCTCATCCTTGTTGGTGTGTGGATGATGTATCGGAAACAGCGAAAACG
GCGCAGAAGACGGAATGATGATCAAAGCCAGATGATGTATACGCCTGTTG
GGGTCGGTCTTCGTGGTGGCGGTGGTAGTAGTAATCGAGACGAAGAATCT
TCAGCTGGTGATGAGAAGCCTGTCACTGGAGTGCCGAATCCTGCCGTTCT
GAGGCAGAATAGTGACTCGGTCAATGCGCTTAGTGCCATCCCCCGGAAAC
CGATTTCGCCGCCACCGCCATCGAACGAGATGAATAGGGAATCTATGGTG
TCCATGTCGACGTCTCCGCCCCTCCCTGCTGCGTTGGTCCCAGGAGATCG
CTCGTCTGCGTCGCCGCCGAATGATGCGGATGGACGATCGTTGTTCCTGC
ATCCGATCCCCCGGAGGCGACCGTCGGAGACAGATGTGCCGTTGCTGGAT
AGTGGTGACGTGCATGAGGCGCCCGGAAGTCCAGTACAACGGCCGACATT
TGAGCTAGATGCAGGGCCCGTGCGAGGAATGCATCAACAACCTATTCATC
ATGAGTAGATGATGCCCACTCAAAGCCACCTCAATTCCTATACGCGCTAT
TCGCTCCTCGTCCTGGGATTACTCCTGCATGCACATGTACCGCTCGTAGC
GGGTGATGATAACTCTAATTGCTCCTCCACCTCAACAATATCCTCCCAAT
CTGATGCCGACTCGCTCTCCTCCTGCGATACCCTCTCCGGCACCCTGACT
ATCTCCACTTCTGCGACAGGCAGTATCTCGCTCTCCAATGTCGAGACCAT
TAACGGTGGGATTACCATCCAGGATGTATCGGGGTTAACGTCTTTCTCGG
CTTCGGATTTACAGAAAGTGAACGGGAAGATCTATATTTCTGGGAATGAT
GACTTGACAAATTTGTCATTTCCGGATTTGGAAAAGGTTCCGGGGGAGAT
TGATATAGAAGGGAATAGCAAGTTAAGGGATATTGTATTCCCGGATTTGA
AGAATGTCGATGGGGCCTTGATTTTGGAGGGGAGTTTTAATGAGATCAAA
TTTGAGGACCTCGATAAGGTCAAAGGACAAACAACTATTCACTCCCATGG
CGGATCATTTCGATGCTCGAGTCTCAATTCTCTTCGTGATGGTGATGATG
ACGATGACGATGATAACAATACTCGCCGTCGCCGCGACAATAACAACAAC
AATAACAACGGCGCCTTTCAAGGCGCGTACACCTGCACCGACAGTTCCAG
CAGCGGACTCAGTGCGGGCGCCAAAGCCGGTATTGCCATTGCTGTGATTG
TACTCGTCCTTCTCATCCTTGTTGGTGTGTGGATGATGTATCGGAAACAG
CGAAAACGGCGCAGAAGACGGAATGATGATCAAAGCCAGATGATGTATAC
GCCTGTTGGGGTCGGTCTTCGTGGTGGCGGTGGTAGTAGTAATCGAGACG
AAGAATCTTCAGCTGGTGATGAGAAGCCTGTCACTGGAGTGCCGAATCCT
GCCGTTCTGAGGCAGAATAGTGACTCGGTCAATGCGCTTAGTGCCATCCC
CCGGAAACCGATTTCGCCGCCACCGCCATCGAACGAGATGAATAGGGAAT
CTATGGTGTCCATGTCGACGTCTCCGCCCCTCCCTGCTGCGTTGGTCCCA
GGAGATCGCTCGTCTGCGTCGCCGCCGAATGATGCGGATGGACGATCGTT
GTTCCTGCATCCGATCCCCCGGAGGCGACCGTCGGAGACAGATGTGCCGT
TGCTGGATAGTGGTGACGTGCATGAGGCGCCCGGAAGTCCAGTACAACGG
CCGACATTTGAGCTAGATGCAGGGCCCGTGCGAGGAATGCATCAACAACC
TATTCATCATGAGTAGATGATGCCCACTCAAAGCCACCTCAATTCCTATA
CGCGCTATTCGCTCCTCGTCCTGGGATTACTCCTGCATGCACATGTACCG
CTCGTAGCGGGTGATGATAACTCTAATTGCTCCTCCACCTCAACAATATC
CTCCCAATCTGATGCCGACTCGCTCTCCTCCTGCGATACCCTCTCCGGCA
CCCTGACTATCTCCACTTCTGCGACAGGCAGTATCTCGCTCTCCAATGTC
GAGACCATTAACGGTGGGATTACCATCCAGGATGTATCGGGGTTAACGTC
TTTCTCGGCTTCGGATTTACAGAAAGTGAACGGGAAGATCTATATTTCTG
GGAATGATGACTTGACAAATTTGTCATTTCCGGATTTGGAAAAGGTTCCG
GGGGAGATTGATATAGAAGGGAATAGCAAGTTAAGGGATATTGTATTCCC
GGATTTGAAGAATGTCGATGGGGCCTTGATTTTGGAGGGGAGTTTTAATG
AGATCAAATTTGAGGACCTCGATAAGGTCAAAGGACAAACAACTATTCAC
TCCCATGGCGGATCATTTCGATGCTCGAGTCTCAATTCTCTTCGTGATGG
TGATGATGACGATGACGATGATAACAATACTCGCCGTCGCCGCGACAATA
ACAACAACAATAACAACGGCGCCTTTCAAGGCGCGTACACCTGCACCGAC
AGTTCCAGCAGCGGACTCAGTGCGGGCGCCAAAGCCGGTATTGCCATTGC
TGTGATTGTACTCGTCCTTCTCATCCTTGTTGGTGTGTGGATGATGTATC
GGAAACAGCGAAAACGGCGCAGAAGACGGAATGATGATCAAAGCCAGATG
ATGTATACGCCTGTTGGGGTCGGTCTTCGTGGTGGCGGTGGTAGTAGTAA
TCGAGACGAAGAATCTTCAGCTGGTGATGAGAAGCCTGTCACTGGAGTGC
CGAATCCTGCCGTTCTGAGGCAGAATAGTGACTCGGTCAATGCGCTTAGT
GCCATCCCCCGGAAACCGATTTCGCCGCCACCGCCATCGAACGAGATGAA
TAGGGAATCTATGGTGTCCATGTCGACGTCTCCGCCCCTCCCTGCTGCGT
TGGTCCCAGGAGATCGCTCGTCTGCGTCGCCGCCGAATGATGCGGATGGA
CGATCGTTGTTCCTGCATCCGATCCCCCGGAGGCGACCGTCGGAGACAGA
TGTGCCGTTGCTGGATAGTGGTGACGTGCATGAGGCGCCCGGAAGTCCAG
TACAACGGCCGACATTTGAGCTAGATGCAGGGCCCGTGCGAGGAATGCAT
CAACAACCTATTCATCATGAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002817-T1.utr5p1 | KJC3_002817-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-32) |
| DBxref | InterPro:IPR036941 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3663488..3665195 + |
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