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KJC3_002821-T1, KJC3_002821-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002821-T1
Unique NameKJC3_002821-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3671226..3672530+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002821-T1 ID=KJC3_002821-T1|Name=KJC3_002821-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1305bp|location=Sequence derived from alignment at ch2:3671226..3672530+ (Aspergillus niger KJC3)
AGTAAATGGAGAGGAGTGTAGTTTGGTCAATTGAACTTTTCTACTCCGAA
TAAATGTCTCATCCTGTCCCAGCTCTATCTCCATCAATCTCAATTCAACC
AATTCAACTCAATATCCCTCCTATAACTCAGTCGGAAAACACACGATGCA
TTCGAAAATGAGCGTAACCTGGACCGACATCAACGCCTTCGACGTCCCCG
AACACTTCAGTCGTTACCCCGCCGGCATTGCCAATAACGCCGTGGAAGTC
GAGACGGCCATCAACAAAGTCATCGATGCATCTTGTTCTTCTGGCTCAAA
GGAGTGGAAGAAAGCTAAGATCCGCCATTCGAACCCTGATAACAATCCTT
TTGCTATTTGCCACTGTACTGCCTTTCCAGATCGGTTGATAATGCTTTCG
TGTATCATTGAGCTGGCGTGGATAAATGATGGTGTGTACTGTGCTTTCTA
GGTGGATTGCAACAAACTAACCGGTGAAGATGTTACCGAGGAACTGGAGC
ATAAAGCAGTAATTATTTCTAGTCCCCGTTTAGGTAGGTTTGGTTAATAA
AGTATTTTACAGGCAATGGCCAAACACGACATCCTCATCGAAGCAATGAG
TTTCGAAACCCTCGTCAAAGCTGATATCGGTTACTTCAATTCCCGCGAAA
TGCTCTTCGGACTGCTCGTCCAGAAAGCCTGTGGCGTAGATCCAGCATCC
GCACCGGCCGTTGTCAAAGTCCTCCCTAACTACCTCCGAACCTTCGATGC
CAGCGATGAGGATTTCACGACCATGGATAAGTATAATCCGTACCGGGTGG
CTAATTGTGGATACTGGTTAGACTACCCTCCTCTACACTCTAACCTTCGT
ACCTTGTCTAACAAAGGTGTCCACCTAGGATATCATCCTTCTTCATCCGG
TGGGGAATGGATCTAACCCTAACCGATGCTGAGTACGCCCAAATCGCCTC
CTTCGATTTCTCTATGGGGATCATCCTCGGCCTCACAAACGATTACTACT
CCTGGGCCGTTGAAAAGGACCAAGTAACGGACCGGATGAGGAATGCTGTC
CGCGTGCTTATGAATGAGTACAATGTTCCTGATACTATTGCAAAGTCTCT
ACTTAGGGGATTGATAGTGGATGAGGAGGAAAAGGCGGCGAGGTTGAAGA
GAGAGATTTTAGATGATGGACCGAGTGCTGCGGTGATGCAGTATATTGAT
GCGATTGAGTTGTATGTTGGGGGGAGTTGTTACTGGCATGCTACTGCTCC
GAGATATAGAGTCTAGGTTTATCAACGTAGGACTTGAATGAATATGAATA
TGAAT
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Coding sequence (CDS) from alignment at ch2:3671226..3672530+

>KJC3_002821-T1 ID=KJC3_002821-T1|Name=KJC3_002821-T1|organism=Aspergillus niger KJC3|type=CDS|length=3828bp|location=Sequence derived from alignment at ch2:3671226..3672530+ (Aspergillus niger KJC3)
ATGCATTCGAAAATGAGCGTAACCTGGACCGACATCAACGCCTTCGACGT
CCCCGAACACTTCAGTCGTTACCCCGCCGGCATTGCCAATAACGCCGTGG
AAGTCGAGACGGCCATCAACAAAGTCATCGATGCATCTTGTTCTTCTGGC
TCAAAGGAGTGGAAGAAAGCTAAGATCCGCCATTCGAACCCTGATAACAA
TCCTTTTGCTATTTGCCACTGTACTGCCTTTCCAGATCGGTTGATAATGC
TTTCGTGTATCATTGAGCTGGCGTGGATAAATGATGATGTTACCGAGGAA
CTGGAGCATAAAGCAGCAATGGCCAAACACGACATCCTCATCGAAGCAAT
GAGTTTCGAAACCCTCGTCAAAGCTGATATCGGTTACTTCAATTCCCGCG
AAATGCTCTTCGGACTGCTCGTCCAGAAAGCCTGTGGCGTAGATCCAGCA
TCCGCACCGGCCGTTGTCAAAGTCCTCCCTAACTACCTCCGAACCTTCGA
TGCCAGCGATGAGGATTTCACGACCATGGATAAGTATAATCCGTACCGGG
TGGCTAATTGTGGATACTGGATATCATCCTTCTTCATCCGGTGGGGAATG
GATCTAACCCTAACCGATGCTGAGTACGCCCAAATCGCCTCCTTCGATTT
CTCTATGGGGATCATCCTCGGCCTCACAAACGATTACTACTCCTGGGCCG
TTGAAAAGGACCAAGTAACGGACCGGATGAGGAATGCTGTCCGCGTGCTT
ATGAATGAGTACAATGTTCCTGATACTATTGCAAAGTCTCTACTTAGGGG
ATTGATAGTGGATGAGGAGGAAAAGGCGGCGAGGTTGAAGAGAGAGATTT
TAGATGATGGACCGAGTGCTGCGGTGATGCAGTATATTGATGCGATTGAG
TTGTATGTTGGGGGGAGTTGTTACTGGCATGCTACTGCTCCGAGATATAG
AGTCTAGATGCATTCGAAAATGAGCGTAACCTGGACCGACATCAACGCCT
TCGACGTCCCCGAACACTTCAGTCGTTACCCCGCCGGCATTGCCAATAAC
GCCGTGGAAGTCGAGACGGCCATCAACAAAGTCATCGATGCATCTTGTTC
TTCTGGCTCAAAGGAGTGGAAGAAAGCTAAGATCCGCCATTCGAACCCTG
ATAACAATCCTTTTGCTATTTGCCACTGTACTGCCTTTCCAGATCGGTTG
ATAATGCTTTCGTGTATCATTGAGCTGGCGTGGATAAATGATGATGTTAC
CGAGGAACTGGAGCATAAAGCAGCAATGGCCAAACACGACATCCTCATCG
AAGCAATGAGTTTCGAAACCCTCGTCAAAGCTGATATCGGTTACTTCAAT
TCCCGCGAAATGCTCTTCGGACTGCTCGTCCAGAAAGCCTGTGGCGTAGA
TCCAGCATCCGCACCGGCCGTTGTCAAAGTCCTCCCTAACTACCTCCGAA
CCTTCGATGCCAGCGATGAGGATTTCACGACCATGGATAAGTATAATCCG
TACCGGGTGGCTAATTGTGGATACTGGATATCATCCTTCTTCATCCGGTG
GGGAATGGATCTAACCCTAACCGATGCTGAGTACGCCCAAATCGCCTCCT
TCGATTTCTCTATGGGGATCATCCTCGGCCTCACAAACGATTACTACTCC
TGGGCCGTTGAAAAGGACCAAGTAACGGACCGGATGAGGAATGCTGTCCG
CGTGCTTATGAATGAGTACAATGTTCCTGATACTATTGCAAAGTCTCTAC
TTAGGGGATTGATAGTGGATGAGGAGGAAAAGGCGGCGAGGTTGAAGAGA
GAGATTTTAGATGATGGACCGAGTGCTGCGGTGATGCAGTATATTGATGC
GATTGAGTTGTATGTTGGGGGGAGTTGTTACTGGCATGCTACTGCTCCGA
GATATAGAGTCTAGATGCATTCGAAAATGAGCGTAACCTGGACCGACATC
AACGCCTTCGACGTCCCCGAACACTTCAGTCGTTACCCCGCCGGCATTGC
CAATAACGCCGTGGAAGTCGAGACGGCCATCAACAAAGTCATCGATGCAT
CTTGTTCTTCTGGCTCAAAGGAGTGGAAGAAAGCTAAGATCCGCCATTCG
AACCCTGATAACAATCCTTTTGCTATTTGCCACTGTACTGCCTTTCCAGA
TCGGTTGATAATGCTTTCGTGTATCATTGAGCTGGCGTGGATAAATGATG
ATGTTACCGAGGAACTGGAGCATAAAGCAGCAATGGCCAAACACGACATC
CTCATCGAAGCAATGAGTTTCGAAACCCTCGTCAAAGCTGATATCGGTTA
CTTCAATTCCCGCGAAATGCTCTTCGGACTGCTCGTCCAGAAAGCCTGTG
GCGTAGATCCAGCATCCGCACCGGCCGTTGTCAAAGTCCTCCCTAACTAC
CTCCGAACCTTCGATGCCAGCGATGAGGATTTCACGACCATGGATAAGTA
TAATCCGTACCGGGTGGCTAATTGTGGATACTGGATATCATCCTTCTTCA
TCCGGTGGGGAATGGATCTAACCCTAACCGATGCTGAGTACGCCCAAATC
GCCTCCTTCGATTTCTCTATGGGGATCATCCTCGGCCTCACAAACGATTA
CTACTCCTGGGCCGTTGAAAAGGACCAAGTAACGGACCGGATGAGGAATG
CTGTCCGCGTGCTTATGAATGAGTACAATGTTCCTGATACTATTGCAAAG
TCTCTACTTAGGGGATTGATAGTGGATGAGGAGGAAAAGGCGGCGAGGTT
GAAGAGAGAGATTTTAGATGATGGACCGAGTGCTGCGGTGATGCAGTATA
TTGATGCGATTGAGTTGTATGTTGGGGGGAGTTGTTACTGGCATGCTACT
GCTCCGAGATATAGAGTCTAGATGCATTCGAAAATGAGCGTAACCTGGAC
CGACATCAACGCCTTCGACGTCCCCGAACACTTCAGTCGTTACCCCGCCG
GCATTGCCAATAACGCCGTGGAAGTCGAGACGGCCATCAACAAAGTCATC
GATGCATCTTGTTCTTCTGGCTCAAAGGAGTGGAAGAAAGCTAAGATCCG
CCATTCGAACCCTGATAACAATCCTTTTGCTATTTGCCACTGTACTGCCT
TTCCAGATCGGTTGATAATGCTTTCGTGTATCATTGAGCTGGCGTGGATA
AATGATGATGTTACCGAGGAACTGGAGCATAAAGCAGCAATGGCCAAACA
CGACATCCTCATCGAAGCAATGAGTTTCGAAACCCTCGTCAAAGCTGATA
TCGGTTACTTCAATTCCCGCGAAATGCTCTTCGGACTGCTCGTCCAGAAA
GCCTGTGGCGTAGATCCAGCATCCGCACCGGCCGTTGTCAAAGTCCTCCC
TAACTACCTCCGAACCTTCGATGCCAGCGATGAGGATTTCACGACCATGG
ATAAGTATAATCCGTACCGGGTGGCTAATTGTGGATACTGGATATCATCC
TTCTTCATCCGGTGGGGAATGGATCTAACCCTAACCGATGCTGAGTACGC
CCAAATCGCCTCCTTCGATTTCTCTATGGGGATCATCCTCGGCCTCACAA
ACGATTACTACTCCTGGGCCGTTGAAAAGGACCAAGTAACGGACCGGATG
AGGAATGCTGTCCGCGTGCTTATGAATGAGTACAATGTTCCTGATACTAT
TGCAAAGTCTCTACTTAGGGGATTGATAGTGGATGAGGAGGAAAAGGCGG
CGAGGTTGAAGAGAGAGATTTTAGATGATGGACCGAGTGCTGCGGTGATG
CAGTATATTGATGCGATTGAGTTGTATGTTGGGGGGAGTTGTTACTGGCA
TGCTACTGCTCCGAGATATAGAGTCTAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002821KJC3_002821Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002821-T1KJC3_002821-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002821-T1.utr5p1KJC3_002821-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002821-T1.exon1KJC3_002821-T1.exon1Aspergillus niger KJC3exon
KJC3_002821-T1.exon2KJC3_002821-T1.exon2Aspergillus niger KJC3exon
KJC3_002821-T1.exon3KJC3_002821-T1.exon3Aspergillus niger KJC3exon
KJC3_002821-T1.exon4KJC3_002821-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002821-T1.cdsKJC3_002821-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002821-T1.utr3p1KJC3_002821-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008949
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3671226..3672530 +
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