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KJC3_002831-T1, KJC3_002831-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002831-T1
Unique NameKJC3_002831-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3702186..3704589-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002831-T1 ID=KJC3_002831-T1|Name=KJC3_002831-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2404bp|location=Sequence derived from alignment at ch2:3702186..3704589- (Aspergillus niger KJC3)
AAAAAAAAAGGGAACCCCTGGACCAACAGAAAGTGGATCTCGCACGACTG
ACATCAACTCGCTCAACTCTCTTTCCTCGCCGTCGCTCTTCCAGCCTGTC
TTTTTTTCCCCTTCCCCGTCCAGTTTCTCACATTCACATCTTTCTCTTCT
TTATTTATTCGCTTCGTTTGCTTCTTGTTCTTGTAATACTATTTGTCTTG
GGGGTTCTATTCAAGTCTTTCCCTATTTAAACCCGTTCGGTCCTTGCTTG
TTCAAAATCGATCGCCGAGGTTCTACCTCTTGATCCTCGTTTCGCCCATT
CCCGCTCCGCTCGGTATCTTATCCCGTCTCTTCTCTTCCCCTCCCTCGAT
CTAATCGATAAAAGTGAGACCAGCGACTACTCGAACGTCGAGAATAATCA
GCAGAATAGTTGGAGTATACAATCATGGCTCGTGTACGGAGAAGGTCGAG
TAACCTGGGGGCGGACATTCGGGGAGACACCACCGCTCCCGCCATGTCCA
CCATGAACGAAGTCAGCCCCATTGAACCCGAGGCTCCTAAATGGGACAAG
GTATGGATCTCTCACGACTAGACGTCGACTCTCGCTGGGGTTCCTCATCC
CCCCCGCTCACTCCTCCGCCAGGCCTTGCAGAATCAATCCGCCGATAAAC
TCTCCAAGCCGCATACGAAGCGCCGCAAGAAGTCCCCGCTCCGTCGCTTC
AAGGATGTGTGTCTCAAGCATACTTGGCTTTTGCCTCTCCTCATGCTCAT
CGTTCTTCTGTCGCTGTACGCGATCAACCCGACGGAATCCAATCCCATGC
ATAGCGCCATCTTTTTGTCTTATCCTCTGCCTCCAAAGGTCCCCGGTGGT
CCGATCATGTATGGAAAGGGCCCCAAGGATATTACCTTTGTCTCATTCTA
CACGATTGTTCTGTCGTTTACTCGAGAATTCCTGATGCAGCGCCTTATTC
GGCCTTTCGCTGTATACTGCGGGATCCGAGGCCGGGGCAAGACTGCCCGT
TTCATGGAGCAGGTGTACACCGCGATCTACTTTGCCATCTTCGGTCCATT
CGGCCTGTACGTCATGAGCCGGTCGGATATCTGGTACTTCAACACTACGG
CCATGTTCGAAGGGTTCCCCCACCGGGAGCACGAAGGGTTGTTCAAGGCA
TTCTATCTGCTTGAGGCTAGTTACTGGGCTCAGCAGGCGATTGTCCTGAT
GTTGCAGTTGGAGAAGCCGCGCAAGGATTTCAAGGAGCTGGTTGGACACC
ACATCATCACTCTGGCTCTGATCGGATTGAGTTATCGCTTCCACTTCACC
TACATGGGTATCGCCGTCTACATCACGCACGACATCTCTGACTTCTTCCT
TGCTGTGAGTGATCCGATTCGAAGTCCACACTTTTTCTGTTCTTCATGCT
GATCGAGTTGCCGTGCAGACCTCCAAGACCTTGAACTACCTCGACCACAT
CATCACTGTCCCTTACTTTGGTATGTTTGTGGGCATGTGGATCTACCTTC
GCCACTATCTGAATCTTAAGATCCTCTGGGCTGTGTTGACCGAGTTCCGC
ACGGTCGGACCTTTTGAGCTGAACTGGGAGACTCAACAGTACAAGTGCTG
GATCAGTCAGTACATCACTTTTGCCCTGTTGGCCAGTCTGCAAGCCGTGA
ACCTCTTCTGGCTCTTCCTGATCCTGCGCATCCTGAAGAACTACATTTTC
AACAGCATCAAGAAGGACGAGAGAAGCGAAGATGAAGACTCGGAGGAAGA
GGAAGTCCCTGTGCCGGACACGGACACCCACGCGACCCTTGCGACCGGCG
TCGAGGGAGCCACCGTGACTGCACGTGGCAAGGAGAACCAGACTCCGCAG
GTGCTGGTCAACGGCAAGCCCGTCAACTCCAAGAACTGAACACAGTTTCA
GGATCAGGACTGACTCCCTTCCTGAGGAGATCTATGTATCTCCAATCCAC
CATCCACTACCCACGTGGACTGTATGAATTTTTCATGGGGTTTGTTTATA
TTGTATGAACGGGAACATTTACGACAGCCTTGTTTGGACCTTGTTCAAGA
CAGAATTTTAACATTTTTTTCCCCCAACCATTACGGAGTACTATTATTTA
TTAACATTTTTTGTCCGGTGCTTATGGTCTAATCGGCATCTCATGTATTC
ATTTCATTTCTTTTTTTTTTTCCCTTTGCCTTTCCATATTAGTCATTCAT
ACGAAAGCATCATGCCCCAGGCTGCAGCATGCCAGGAGCGAGACGGGACA
GGGTGGATCTTATAAACTTAACGAGTGTTTTTCATCATCAATCCATGATT
TACCGGGGTTCCAGGCCCCCAAATCTGTGTCATGGACATAATATAATAAT
AGACCATTGTGCTGATTCGTCGAGCAAATCAATCAACATACTCTCTCTCT
TCCG
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Coding sequence (CDS) from alignment at ch2:3702186..3704589-

>KJC3_002831-T1 ID=KJC3_002831-T1|Name=KJC3_002831-T1|organism=Aspergillus niger KJC3|type=CDS|length=3987bp|location=Sequence derived from alignment at ch2:3702186..3704589- (Aspergillus niger KJC3)
ACCTCCAAGACCTTGAACTACCTCGACCACATCATCACTGTCCCTTACTT
TGGTATGTTTGTGGGCATGTGGATCTACCTTCGCCACTATCTGAATCTTA
AGATCCTCTGGGCTGTGTTGACCGAGTTCCGCACGGTCGGACCTTTTGAG
CTGAACTGGGAGACTCAACAGTACAAGTGCTGGATCAGTCAGTACATCAC
TTTTGCCCTGTTGGCCAGTCTGCAAGCCGTGAACCTCTTCTGGCTCTTCC
TGATCCTGCGCATCCTGAAGAACTACATTTTCAACAGCATCAAGAAGGAC
GAGAGAAGCGAAGATGAAGACTCGGAGGAAGAGGAAGTCCCTGTGCCGGA
CACGGACACCCACGCGACCCTTGCGACCGGCGTCGAGGGAGCCACCGTGA
CTGCACGTGGCAAGGAGAACCAGACTCCGCAGGTGCTGGTCAACGGCAAG
CCCGTCAACTCCAAGAACTGAGCCTTGCAGAATCAATCCGCCGATAAACT
CTCCAAGCCGCATACGAAGCGCCGCAAGAAGTCCCCGCTCCGTCGCTTCA
AGGATGTGTGTCTCAAGCATACTTGGCTTTTGCCTCTCCTCATGCTCATC
GTTCTTCTGTCGCTGTACGCGATCAACCCGACGGAATCCAATCCCATGCA
TAGCGCCATCTTTTTGTCTTATCCTCTGCCTCCAAAGGTCCCCGGTGGTC
CGATCATGTATGGAAAGGGCCCCAAGGATATTACCTTTGTCTCATTCTAC
ACGATTGTTCTGTCGTTTACTCGAGAATTCCTGATGCAGCGCCTTATTCG
GCCTTTCGCTGTATACTGCGGGATCCGAGGCCGGGGCAAGACTGCCCGTT
TCATGGAGCAGGTGTACACCGCGATCTACTTTGCCATCTTCGGTCCATTC
GGCCTGTACGTCATGAGCCGGTCGGATATCTGGTACTTCAACACTACGGC
CATGTTCGAAGGGTTCCCCCACCGGGAGCACGAAGGGTTGTTCAAGGCAT
TCTATCTGCTTGAGGCTAGTTACTGGGCTCAGCAGGCGATTGTCCTGATG
TTGCAGTTGGAGAAGCCGCGCAAGGATTTCAAGGAGCTGGTTGGACACCA
CATCATCACTCTGGCTCTGATCGGATTGAGTTATCGCTTCCACTTCACCT
ACATGGGTATCGCCGTCTACATCACGCACGACATCTCTGACTTCTTCCTT
GCTATGGCTCGTGTACGGAGAAGGTCGAGTAACCTGGGGGCGGACATTCG
GGGAGACACCACCGCTCCCGCCATGTCCACCATGAACGAAGTCAGCCCCA
TTGAACCCGAGGCTCCTAAATGGGACAAGACCTCCAAGACCTTGAACTAC
CTCGACCACATCATCACTGTCCCTTACTTTGGTATGTTTGTGGGCATGTG
GATCTACCTTCGCCACTATCTGAATCTTAAGATCCTCTGGGCTGTGTTGA
CCGAGTTCCGCACGGTCGGACCTTTTGAGCTGAACTGGGAGACTCAACAG
TACAAGTGCTGGATCAGTCAGTACATCACTTTTGCCCTGTTGGCCAGTCT
GCAAGCCGTGAACCTCTTCTGGCTCTTCCTGATCCTGCGCATCCTGAAGA
ACTACATTTTCAACAGCATCAAGAAGGACGAGAGAAGCGAAGATGAAGAC
TCGGAGGAAGAGGAAGTCCCTGTGCCGGACACGGACACCCACGCGACCCT
TGCGACCGGCGTCGAGGGAGCCACCGTGACTGCACGTGGCAAGGAGAACC
AGACTCCGCAGGTGCTGGTCAACGGCAAGCCCGTCAACTCCAAGAACTGA
GCCTTGCAGAATCAATCCGCCGATAAACTCTCCAAGCCGCATACGAAGCG
CCGCAAGAAGTCCCCGCTCCGTCGCTTCAAGGATGTGTGTCTCAAGCATA
CTTGGCTTTTGCCTCTCCTCATGCTCATCGTTCTTCTGTCGCTGTACGCG
ATCAACCCGACGGAATCCAATCCCATGCATAGCGCCATCTTTTTGTCTTA
TCCTCTGCCTCCAAAGGTCCCCGGTGGTCCGATCATGTATGGAAAGGGCC
CCAAGGATATTACCTTTGTCTCATTCTACACGATTGTTCTGTCGTTTACT
CGAGAATTCCTGATGCAGCGCCTTATTCGGCCTTTCGCTGTATACTGCGG
GATCCGAGGCCGGGGCAAGACTGCCCGTTTCATGGAGCAGGTGTACACCG
CGATCTACTTTGCCATCTTCGGTCCATTCGGCCTGTACGTCATGAGCCGG
TCGGATATCTGGTACTTCAACACTACGGCCATGTTCGAAGGGTTCCCCCA
CCGGGAGCACGAAGGGTTGTTCAAGGCATTCTATCTGCTTGAGGCTAGTT
ACTGGGCTCAGCAGGCGATTGTCCTGATGTTGCAGTTGGAGAAGCCGCGC
AAGGATTTCAAGGAGCTGGTTGGACACCACATCATCACTCTGGCTCTGAT
CGGATTGAGTTATCGCTTCCACTTCACCTACATGGGTATCGCCGTCTACA
TCACGCACGACATCTCTGACTTCTTCCTTGCTATGGCTCGTGTACGGAGA
AGGTCGAGTAACCTGGGGGCGGACATTCGGGGAGACACCACCGCTCCCGC
CATGTCCACCATGAACGAAGTCAGCCCCATTGAACCCGAGGCTCCTAAAT
GGGACAAGACCTCCAAGACCTTGAACTACCTCGACCACATCATCACTGTC
CCTTACTTTGGTATGTTTGTGGGCATGTGGATCTACCTTCGCCACTATCT
GAATCTTAAGATCCTCTGGGCTGTGTTGACCGAGTTCCGCACGGTCGGAC
CTTTTGAGCTGAACTGGGAGACTCAACAGTACAAGTGCTGGATCAGTCAG
TACATCACTTTTGCCCTGTTGGCCAGTCTGCAAGCCGTGAACCTCTTCTG
GCTCTTCCTGATCCTGCGCATCCTGAAGAACTACATTTTCAACAGCATCA
AGAAGGACGAGAGAAGCGAAGATGAAGACTCGGAGGAAGAGGAAGTCCCT
GTGCCGGACACGGACACCCACGCGACCCTTGCGACCGGCGTCGAGGGAGC
CACCGTGACTGCACGTGGCAAGGAGAACCAGACTCCGCAGGTGCTGGTCA
ACGGCAAGCCCGTCAACTCCAAGAACTGAGCCTTGCAGAATCAATCCGCC
GATAAACTCTCCAAGCCGCATACGAAGCGCCGCAAGAAGTCCCCGCTCCG
TCGCTTCAAGGATGTGTGTCTCAAGCATACTTGGCTTTTGCCTCTCCTCA
TGCTCATCGTTCTTCTGTCGCTGTACGCGATCAACCCGACGGAATCCAAT
CCCATGCATAGCGCCATCTTTTTGTCTTATCCTCTGCCTCCAAAGGTCCC
CGGTGGTCCGATCATGTATGGAAAGGGCCCCAAGGATATTACCTTTGTCT
CATTCTACACGATTGTTCTGTCGTTTACTCGAGAATTCCTGATGCAGCGC
CTTATTCGGCCTTTCGCTGTATACTGCGGGATCCGAGGCCGGGGCAAGAC
TGCCCGTTTCATGGAGCAGGTGTACACCGCGATCTACTTTGCCATCTTCG
GTCCATTCGGCCTGTACGTCATGAGCCGGTCGGATATCTGGTACTTCAAC
ACTACGGCCATGTTCGAAGGGTTCCCCCACCGGGAGCACGAAGGGTTGTT
CAAGGCATTCTATCTGCTTGAGGCTAGTTACTGGGCTCAGCAGGCGATTG
TCCTGATGTTGCAGTTGGAGAAGCCGCGCAAGGATTTCAAGGAGCTGGTT
GGACACCACATCATCACTCTGGCTCTGATCGGATTGAGTTATCGCTTCCA
CTTCACCTACATGGGTATCGCCGTCTACATCACGCACGACATCTCTGACT
TCTTCCTTGCTATGGCTCGTGTACGGAGAAGGTCGAGTAACCTGGGGGCG
GACATTCGGGGAGACACCACCGCTCCCGCCATGTCCACCATGAACGAAGT
CAGCCCCATTGAACCCGAGGCTCCTAAATGGGACAAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002831KJC3_002831Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002831-T1KJC3_002831-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002831-T1.cdsKJC3_002831-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002831-T1.utr3p1KJC3_002831-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002831-T1.exon4KJC3_002831-T1.exon4Aspergillus niger KJC3exon
KJC3_002831-T1.exon3KJC3_002831-T1.exon3Aspergillus niger KJC3exon
KJC3_002831-T1.exon2KJC3_002831-T1.exon2Aspergillus niger KJC3exon
KJC3_002831-T1.exon1KJC3_002831-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002831-T1.utr5p2KJC3_002831-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_002831-T1.utr5p1KJC3_002831-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013599
DBxrefInterPro:IPR006634
DBxrefPFAM:PF03798
DBxrefPFAM:PF08390
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3702186..3704589 -
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