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KJC3_002849-T1, KJC3_002849-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002849-T1
Unique NameKJC3_002849-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3753993..3755700+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002849-T1 ID=KJC3_002849-T1|Name=KJC3_002849-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1708bp|location=Sequence derived from alignment at ch2:3753993..3755700+ (Aspergillus niger KJC3)
TGATATCCCATCCAGCAGAACCACATCCCATTCCTCCATCCCCTTCACGA
GATACTCTAGGTTTGGCTCTGGTGTATACGACTAATGAGTGTTTCCGAGT
ACATTCTATCTGTTTGATTCTGCGATTAGACACACCCAATTCCCTGCGAT
CAACCATCGTCAACCGCATCCCAATCTACTGCCATCACAATGAACAACAG
GCCTGTCGAACAAGCGCTGGCCACGCTACTGCCTACACACGCCCAAGACC
TCCCACAAGAACTTCTCAGTCTCGCCATATCACTCGTCGCCCAATCGCGC
AGCTTCTCCAGCAGTCTCAAGCCCGAAGAAGAGATCGCTCGGCCGTATGC
GTGCGCTGAAATTGCTTGCAAGAGGTGTGTAGTACACCAATCTTTACAAA
CCAGAACCTGATTAGCATGAATGATTCTAACTATCCCTCACAATGATAGA
TTAACTCGCGCTCTCAAACTCCCTCCTCTCCTTGGCCACCCGCCATGTCC
TCCCCGCGCCTACAAAAAGCTCTACGCCTTCCTTGACCGATCCCTATCCA
CTGGAATTTCCCGCGCAAGTGCCTCAGCCCCAGGGACACCGTCTCGCGCT
GGATCAGCACCATCAACACCGAGAAAGGGCACGCAAAGGACCCCGTCAAA
GACTGCCGCAGCTGCTACTCCGCGAGGGATACAACAACAACAACACCAAC
AGAACACACCTACGAAATCCACCCCTCTCAAGCGCGCTCTCTCACACACC
GACAATGACAAACCCTCGCCATCACCTCGACCCCAGAAAATCCCCAAATT
CCGCGCGAATGGCCTCTCCGGCTCAACTATCATCCCCGACGCCCCTAGCT
GGGTGATGACTTCCATCCGAACAGTTTGCAAGACGCTTTCGACGCCCGCA
CCGCGCATGAGCACGTGGTCTCGGCCGCCTATCTCACGGACTCTCCCGCC
ACATATCTTCGCCGGTGTATCTTCCATTCTGTATATGATTTCCGAAGCGA
CGGCGAAACACGACGAAGAAATTGACGAGGAGATGATGGAGTTTCTGGAG
CCGGTGATTACAGCCAAGGATAAAGAGAACGATGAGGATTTCAAGGACAT
TATCAGTGCCTTGATCGTGGCAGTGTACTTCCTCGTCCTTGCTCGTCGAC
GACAACCGGGCCCTTCGTCAACCGGGGATAGTGCCGAGGCAGCGGAAGCG
AAGAAAATGGATAAGAAGACGTTCTCGGAGATGCGACAGACTGCGCTGGT
TAGTCTTGGGCTTCCGTCAACGGAGAGGCGGCATCGGGAGGATGTGGATC
AGTGGATTGCGCTGGTTATGGAACAGGGGTGGGCTCATGGCAAGGAGTGG
TTTGAAAATGTGCCGTTGGCTGGGGAGTTGGATGGAGATGAGAGGGATTT
AGGGGATGGACTAGCGGGTGGGGTTGTCGAGGAGGATGGTGGTAGGGGCA
GGTTGATGGTGTCTGGGAGGGGGGCATTGATTGCGGGCCAGTCTTCGAGA
CGTGGGCTGCTTCCTGGGTTGGGGACTATGATGCAGGATCGGGTGGATTG
GTTGAGTGAGGATCGGAGGGAGGGTTATCTTGAGTGGAAGGCGGATATGG
TGGCGCGGATCGAACAGATTGAGAGGACGGCTCAGGCTGTGTAAGAGGTA
TGGAACGCTATAGATTAGACTAGAAGAGATACCCATGATGTGAGATGATG
GTTTTTTT
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Coding sequence (CDS) from alignment at ch2:3753993..3755700+

>KJC3_002849-T1 ID=KJC3_002849-T1|Name=KJC3_002849-T1|organism=Aspergillus niger KJC3|type=CDS|length=1224bp|location=Sequence derived from alignment at ch2:3753993..3755700+ (Aspergillus niger KJC3)
ATGATTCTAACTATCCCTCACAATGATAGATTAACTCGCGCTCTCAAACT
CCCTCCTCTCCTTGGCCACCCGCCATGTCCTCCCCGCGCCTACAAAAAGC
TCTACGCCTTCCTTGACCGATCCCTATCCACTGGAATTTCCCGCGCAAGT
GCCTCAGCCCCAGGGACACCGTCTCGCGCTGGATCAGCACCATCAACACC
GAGAAAGGGCACGCAAAGGACCCCGTCAAAGACTGCCGCAGCTGCTACTC
CGCGAGGGATACAACAACAACAACACCAACAGAACACACCTACGAAATCC
ACCCCTCTCAAGCGCGCTCTCTCACACACCGACAATGACAAACCCTCGCC
ATCACCTCGACCCCAGAAAATCCCCAAATTCCGCGCGAATGGCCTCTCCG
GCTCAACTATCATCCCCGACGCCCCTAGCTGGGTGATGACTTCCATCCGA
ACAGTTTGCAAGACGCTTTCGACGCCCGCACCGCGCATGAGCACGTGGTC
TCGGCCGCCTATCTCACGGACTCTCCCGCCACATATCTTCGCCGGTGTAT
CTTCCATTCTGTATATGATTTCCGAAGCGACGGCGAAACACGACGAAGAA
ATTGACGAGGAGATGATGGAGTTTCTGGAGCCGGTGATTACAGCCAAGGA
TAAAGAGAACGATGAGGATTTCAAGGACATTATCAGTGCCTTGATCGTGG
CAGTGTACTTCCTCGTCCTTGCTCGTCGACGACAACCGGGCCCTTCGTCA
ACCGGGGATAGTGCCGAGGCAGCGGAAGCGAAGAAAATGGATAAGAAGAC
GTTCTCGGAGATGCGACAGACTGCGCTGGTTAGTCTTGGGCTTCCGTCAA
CGGAGAGGCGGCATCGGGAGGATGTGGATCAGTGGATTGCGCTGGTTATG
GAACAGGGGTGGGCTCATGGCAAGGAGTGGTTTGAAAATGTGCCGTTGGC
TGGGGAGTTGGATGGAGATGAGAGGGATTTAGGGGATGGACTAGCGGGTG
GGGTTGTCGAGGAGGATGGTGGTAGGGGCAGGTTGATGGTGTCTGGGAGG
GGGGCATTGATTGCGGGCCAGTCTTCGAGACGTGGGCTGCTTCCTGGGTT
GGGGACTATGATGCAGGATCGGGTGGATTGGTTGAGTGAGGATCGGAGGG
AGGGTTATCTTGAGTGGAAGGCGGATATGGTGGCGCGGATCGAACAGATT
GAGAGGACGGCTCAGGCTGTGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005664nuclear origin of replication recognition complex
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006260DNA replication
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002849KJC3_002849Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002849-T1.utr5p1KJC3_002849-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002849-T1.exon1KJC3_002849-T1.exon1Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002849-T1.cdsKJC3_002849-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002849-T1.utr3p1KJC3_002849-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002849-T1KJC3_002849-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR008721
DBxrefPFAM:PF05460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3753993..3755700 +
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