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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3767597..3769994- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002856-T1 ID=KJC3_002856-T1|Name=KJC3_002856-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2398bp|location=Sequence derived from alignment at ch2:3767597..3769994- (Aspergillus niger KJC3)
CAGATGGTCCCCATCACCTTCTCCCCTCCCCACATCAGCGCTTGTAAACA
ACCCTCGATTGCTTCACCAACGTCACACCGGCTACCTCTCCCTTTCCAGC
ATCTTTCGACTCTACCCCCGTTTTCCCTCCTTTGCCGCTTCCGAATTCCT
GTCTGACGCCGCCCGCACCCTAAGCCGTAATCGCCTAGCCTCGCCCAGAC
TTGGTCCGAACTTCACGTTCCATAGCAACGAGAGGGGTGTACCGCAACTG
CGCCCTCACAATACCTTGGGTGCAGCGCTATTTAGCGGGATTTGCTCACG
ATATTCCGCTTCTCTATGAGATTACCGCCGATCTATAGCTCATCGAGGTC
GCATATTCTCCGCAGAATCCCCGGGGCGCATCCCTCTCACCCGCCGCGTG
CCCATGGTGGTGCGGTAGCAGTGCTCTCAGCATGGCCGCCTTCGTGCGAG
TGTCGGGGCCGCCGAATGGCCATTTTCTGATCGGCTACCCCGGTATATCT
GCAACAATGGTGAGGACTAATTGTTATCTACCCTATCTTCGATGCATACA
GCCATTGCTGACCTCCAGAAGCCACGTATCGAAGGCAAGGTTGAGATCAG
GCCTAGCGTCGGCATCACAGCTCCCGTCAATGTGTCCCTCGTCACCATAT
CCCTTCATCGACGTGAGACAATACATCCCTCCGCCGATTCCGTGACAAAG
AAGCACCTTGCGCCCCCTAGGAAAGAGATCACTGATATTGTGGGCAAGGA
GATGCTCCTCTTCCGCTGCCCAGCGGGTCGAGAGTACGAGGAAGTGATAT
CAATGGATTTGCCCTTCGTCCTTTTTATTCCATTTGGGCGCGGAGGGCCA
GATGCCTCGAGAAGAGTTCCACCCGCCAGTTTGCAACTCCCTAGTCGCAC
CGCAGAGACATTCTATGAAATAGTCGTCATGGTTCAACAGGGACATTCGG
ATCAGCGAAAATACACATTCCCGGTTCCCATCTCCCGATATGACACACTC
TCCACATTCGGAATGTACAACCGTCCCGAGTCGGCAGAAAGGGTGTCAGA
CCATCTGGTCACCTTGGGCATATCCTTGCCTCGGTGGTCTTACGGTCCCC
TTGACCCGGTGAGCGTTTACGTGAAACTATCGCCCAATCTCGACTGGATA
GGCAAAGCCAGGAAAGTCACGATAAATAAGATAACGATTGGGATCGACGA
GGAGATCATCTACAACCATGAAGGTGATGAGCCACAGCGGAAAGTGAGGA
CCTTAACGAAGAGGACAGAGCCGATTGGGGTTAAGCTACCCCCGTCAGGC
TTTTTGACAAATCTGGGTCTAGTATTTCCTGCCAAGGATCTTCGAGATTC
CAAGGGCATTCTCCCCAGAAGCGATATGGCTTTTCCGGCTTACGCTGTGA
CTGGGTTTACGACTACGGCGAGCCTTTATAAGATCGAATACTACCTGACA
GTAAAGGTTCGTCTTCCCATCTTGCAGGTGCAGTTGTGTGACTTCCGCTA
ACAATCTTCAGGCCCACTTGACGTCCGCCAGAGATATCGTCATTCGACAG
CCCATAGTTGTCTGTCCTCTTGATCATGCCGGTTGCAAAGAGGAGATGGA
TGCTATCGAACAGGCTGCCCGCGAAGCGGTTCATATTAATCCAGATAATC
CCATGCTGCCACTTCCTTCCATCGTGCGGCCCAGCGATCCCAATGCTCTT
CGTCATCTGGGTGTGGCCATTGTCGGCAATCAAAAGAAGCCTCTCATAGA
CTGAGCCTCAATTTTCAGTTCGGACTCACATGTCCACGATTTTCAACCAA
GTGATGCCCACGCTTGCTCAGCCGCGGGGTAATCGGGCCATTTTACAGCG
CCATCCCCAGGACAACGCCATATACGCGCCGATAGAGCCTGACCGCGTCG
TATATTTCTTTTCCGATTCGGCGTGCTTGCTGTGACGCAAAAAGCGTCAT
TACGTCTTACGAATGCATGGACTACGGAGTTTTGTCGTTGCATGGTTTTC
CTGGTAGCCATTTCGTTCCATATTTTGTTGGCCGGAGCAAAAACGGGGTG
TTTGGGTTGCCTTTGCTTCACACGGAGGAAAAGGCCGGGGGAGAGTTTCC
ATTCTGGTTTGGTTCACATGCTTTCCCATGCATGTTCTAGTTGTGCATGC
GCAATATAATAGGTAAGATCTACCTTTTACGGCTCAATTCTGGAAGCGAA
AGAGAAGGGACCCATTTTCAGCAGCTAGACTTGGATTCAACATGTGGCAG
ACAGGGCAGATAGATGATCCCGTCCGCATAGTCCACAATATTTCTTGCTT
ATCACGCAAGGCCGACTATCTGGAATACTATATAGCGATGCTAATTTCTG
GAACGAAATACAACGAGAGCCGCGAATACAATGAGGCAAGAGGCTCGT back to topCoding sequence (CDS) from alignment at ch2:3767597..3769994- >KJC3_002856-T1 ID=KJC3_002856-T1|Name=KJC3_002856-T1|organism=Aspergillus niger KJC3|type=CDS|length=3618bp|location=Sequence derived from alignment at ch2:3767597..3769994- (Aspergillus niger KJC3)
GCCCACTTGACGTCCGCCAGAGATATCGTCATTCGACAGCCCATAGTTGT
CTGTCCTCTTGATCATGCCGGTTGCAAAGAGGAGATGGATGCTATCGAAC
AGGCTGCCCGCGAAGCGGTTCATATTAATCCAGATAATCCCATGCTGCCA
CTTCCTTCCATCGTGCGGCCCAGCGATCCCAATGCTCTTCGTCATCTGGG
TGTGGCCATTGTCGGCAATCAAAAGAAGCCTCTCATAGACTGACCACGTA
TCGAAGGCAAGGTTGAGATCAGGCCTAGCGTCGGCATCACAGCTCCCGTC
AATGTGTCCCTCGTCACCATATCCCTTCATCGACGTGAGACAATACATCC
CTCCGCCGATTCCGTGACAAAGAAGCACCTTGCGCCCCCTAGGAAAGAGA
TCACTGATATTGTGGGCAAGGAGATGCTCCTCTTCCGCTGCCCAGCGGGT
CGAGAGTACGAGGAAGTGATATCAATGGATTTGCCCTTCGTCCTTTTTAT
TCCATTTGGGCGCGGAGGGCCAGATGCCTCGAGAAGAGTTCCACCCGCCA
GTTTGCAACTCCCTAGTCGCACCGCAGAGACATTCTATGAAATAGTCGTC
ATGGTTCAACAGGGACATTCGGATCAGCGAAAATACACATTCCCGGTTCC
CATCTCCCGATATGACACACTCTCCACATTCGGAATGTACAACCGTCCCG
AGTCGGCAGAAAGGGTGTCAGACCATCTGGTCACCTTGGGCATATCCTTG
CCTCGGTGGTCTTACGGTCCCCTTGACCCGGTGAGCGTTTACGTGAAACT
ATCGCCCAATCTCGACTGGATAGGCAAAGCCAGGAAAGTCACGATAAATA
AGATAACGATTGGGATCGACGAGGAGATCATCTACAACCATGAAGGTGAT
GAGCCACAGCGGAAAGTGAGGACCTTAACGAAGAGGACAGAGCCGATTGG
GGTTAAGCTACCCCCGTCAGGCTTTTTGACAAATCTGGGTCTAGTATTTC
CTGCCAAGGATCTTCGAGATTCCAAGGGCATTCTCCCCAGAAGCGATATG
GCTTTTCCGGCTTACGCTGTGACTGGGTTTACGACTACGGCGAGCCTTTA
TAAGATCGAATACTACCTGACAGTAAAGATGGCCGCCTTCGTGCGAGTGT
CGGGGCCGCCGAATGGCCATTTTCTGATCGGCTACCCCGGTATATCTGCA
ACAATGGCCCACTTGACGTCCGCCAGAGATATCGTCATTCGACAGCCCAT
AGTTGTCTGTCCTCTTGATCATGCCGGTTGCAAAGAGGAGATGGATGCTA
TCGAACAGGCTGCCCGCGAAGCGGTTCATATTAATCCAGATAATCCCATG
CTGCCACTTCCTTCCATCGTGCGGCCCAGCGATCCCAATGCTCTTCGTCA
TCTGGGTGTGGCCATTGTCGGCAATCAAAAGAAGCCTCTCATAGACTGAC
CACGTATCGAAGGCAAGGTTGAGATCAGGCCTAGCGTCGGCATCACAGCT
CCCGTCAATGTGTCCCTCGTCACCATATCCCTTCATCGACGTGAGACAAT
ACATCCCTCCGCCGATTCCGTGACAAAGAAGCACCTTGCGCCCCCTAGGA
AAGAGATCACTGATATTGTGGGCAAGGAGATGCTCCTCTTCCGCTGCCCA
GCGGGTCGAGAGTACGAGGAAGTGATATCAATGGATTTGCCCTTCGTCCT
TTTTATTCCATTTGGGCGCGGAGGGCCAGATGCCTCGAGAAGAGTTCCAC
CCGCCAGTTTGCAACTCCCTAGTCGCACCGCAGAGACATTCTATGAAATA
GTCGTCATGGTTCAACAGGGACATTCGGATCAGCGAAAATACACATTCCC
GGTTCCCATCTCCCGATATGACACACTCTCCACATTCGGAATGTACAACC
GTCCCGAGTCGGCAGAAAGGGTGTCAGACCATCTGGTCACCTTGGGCATA
TCCTTGCCTCGGTGGTCTTACGGTCCCCTTGACCCGGTGAGCGTTTACGT
GAAACTATCGCCCAATCTCGACTGGATAGGCAAAGCCAGGAAAGTCACGA
TAAATAAGATAACGATTGGGATCGACGAGGAGATCATCTACAACCATGAA
GGTGATGAGCCACAGCGGAAAGTGAGGACCTTAACGAAGAGGACAGAGCC
GATTGGGGTTAAGCTACCCCCGTCAGGCTTTTTGACAAATCTGGGTCTAG
TATTTCCTGCCAAGGATCTTCGAGATTCCAAGGGCATTCTCCCCAGAAGC
GATATGGCTTTTCCGGCTTACGCTGTGACTGGGTTTACGACTACGGCGAG
CCTTTATAAGATCGAATACTACCTGACAGTAAAGATGGCCGCCTTCGTGC
GAGTGTCGGGGCCGCCGAATGGCCATTTTCTGATCGGCTACCCCGGTATA
TCTGCAACAATGGCCCACTTGACGTCCGCCAGAGATATCGTCATTCGACA
GCCCATAGTTGTCTGTCCTCTTGATCATGCCGGTTGCAAAGAGGAGATGG
ATGCTATCGAACAGGCTGCCCGCGAAGCGGTTCATATTAATCCAGATAAT
CCCATGCTGCCACTTCCTTCCATCGTGCGGCCCAGCGATCCCAATGCTCT
TCGTCATCTGGGTGTGGCCATTGTCGGCAATCAAAAGAAGCCTCTCATAG
ACTGACCACGTATCGAAGGCAAGGTTGAGATCAGGCCTAGCGTCGGCATC
ACAGCTCCCGTCAATGTGTCCCTCGTCACCATATCCCTTCATCGACGTGA
GACAATACATCCCTCCGCCGATTCCGTGACAAAGAAGCACCTTGCGCCCC
CTAGGAAAGAGATCACTGATATTGTGGGCAAGGAGATGCTCCTCTTCCGC
TGCCCAGCGGGTCGAGAGTACGAGGAAGTGATATCAATGGATTTGCCCTT
CGTCCTTTTTATTCCATTTGGGCGCGGAGGGCCAGATGCCTCGAGAAGAG
TTCCACCCGCCAGTTTGCAACTCCCTAGTCGCACCGCAGAGACATTCTAT
GAAATAGTCGTCATGGTTCAACAGGGACATTCGGATCAGCGAAAATACAC
ATTCCCGGTTCCCATCTCCCGATATGACACACTCTCCACATTCGGAATGT
ACAACCGTCCCGAGTCGGCAGAAAGGGTGTCAGACCATCTGGTCACCTTG
GGCATATCCTTGCCTCGGTGGTCTTACGGTCCCCTTGACCCGGTGAGCGT
TTACGTGAAACTATCGCCCAATCTCGACTGGATAGGCAAAGCCAGGAAAG
TCACGATAAATAAGATAACGATTGGGATCGACGAGGAGATCATCTACAAC
CATGAAGGTGATGAGCCACAGCGGAAAGTGAGGACCTTAACGAAGAGGAC
AGAGCCGATTGGGGTTAAGCTACCCCCGTCAGGCTTTTTGACAAATCTGG
GTCTAGTATTTCCTGCCAAGGATCTTCGAGATTCCAAGGGCATTCTCCCC
AGAAGCGATATGGCTTTTCCGGCTTACGCTGTGACTGGGTTTACGACTAC
GGCGAGCCTTTATAAGATCGAATACTACCTGACAGTAAAGATGGCCGCCT
TCGTGCGAGTGTCGGGGCCGCCGAATGGCCATTTTCTGATCGGCTACCCC
GGTATATCTGCAACAATG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002856-T1.utr3p1 | KJC3_002856-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002856-T1.utr5p1 | KJC3_002856-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011022 |
| DBxref | PFAM:PF02752 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3767597..3769994 - |
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