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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3798078..3800464- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002867-T1 ID=KJC3_002867-T1|Name=KJC3_002867-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2387bp|location=Sequence derived from alignment at ch2:3798078..3800464- (Aspergillus niger KJC3)
TATCGATTGCGACTTTTCATTTTAAGCGCTATGATGAAGAAGGACTGAGG
GAGTATTTCTCAGCGGCATAATCTCATCACTTTACACTTCACCGCAGGGT
GCCATTCCTCTTGATTCCCACTGCAGGCACTGTAGAAGCTAATTCACATA
TGTAGTCCGCGATAACCTCATCATTTGATTTTCTCCAATTGTCATCTCAT
TGCCCCTATTCCACGATACTCAATTAAATGTTCCTTATGTTACAAGATAC
TCAGTTCTAGGGCATTTGGAATTGAGTACAAAGGGTAGCGACTTTCAATC
CTTTGCTCCACCCACTACTTTAAAGCGCCTCCGGCCATTTCAGATTCTTA
TTGATTGTTTCAACTTGCTACTATATGAGAAACCTCAGCTCCCAGAATGA
CTGAAGAACAAGGGCCTATCTGTGTTGCCTCTACCCGTCAGGAGGGTGAT
GAGCATTGTCCAGGATTTGCAAGTCATTCTCTAAATTCTCAAGACTCCAC
CTCCCTACAATCAAATGAGAAGCGCAGTCTCGGCCAAAACCCTAATACAA
CATATTTCAAGGGCGCAGAATGGTAAGGCTCCAGGTGTCACTATCAGAGC
TTGGCTAATCTTGAAATTCAGGTCGGCGGATGGAACCACTTTATTGACGG
ATTCCTCCGATCACCATATCAGAACCTGGATCTTGTCAGTAAAACCTACT
CTCCTCTTGTCAACATAGCCTGACCAAAACTCTACAGACCACCTGATATG
CTAGAAGACACGGCCTCTCCCTGCGGCTTATCGCCATACTCTGTCTTGCC
GTCAGCAGAACCGACCTATGCGACTGCCATGTACCCTTTCTTCTCCCTTC
AGGACCCGTCGACGACATTATTTCTCTCATCTGTTCGAGACCATCCAATC
AGATTGACATCTGCTCTTGCTCCGACTTCTGTGGCGACTTATTCTCTGGT
AAACCCAATGACAGAAGCCTTCATAACGCCTCATTCAATGATTTATCCAT
CTGCCCTGGGAGGGAGCCAATTTCTCACTGGCTCAGACAGCCTGATTTGC
CTCTTTGATGTCTCTCGACCGGGTAACGATGGACCTGTCACTTCCATGCC
GACAATACCAAGCAAAAGAAAGCAACAGGTGGGTGGAGGCGTGGGAATGA
AAGGAATCATCTCTGCCATGGCCCTGGATCCGACAGGAGCTGGTATTTTA
GCTGCTGGAACCTTCACCAGACATGTCGGACTTTATGGTGCACATGGAAC
AGGGGAGTCCCTAGGGACATTCAGCATATCGAAAACAGAAGCCCACCGTC
ATATTGGCGGCCGTGGAATCACTCAACTGCTGTGGAGCCCCTGCGGAAGG
TACCTCTACGTTGCTGAACGGAAAAGTGATGGAGTCTTAGTATATGATAT
CCGAGTCACTGGACAACTGCTTGGATGGTTGCAGGGCCGCAAAGCTTTCA
CAAATCAACGGTTGAAAATCGATGTATTCCCCAGTGGAGAAAACGGCTCG
CATGAGATCTGGGCTGGCGGAACCGATGGCTGCATGAGGGTGTGGCAGAA
CCCTACACATGCTAGTGGTGCTCAGGATCCCAAGTGGGAATGGAAGGTTC
ATAACGGTAAGTGTGCTTCCCGATGAAGGACAAGGACATCTGTGCTAATA
TAGAATATAGACACTGTGAGCAGTACTGTATTGCATCCAATGGGGAATAT
AGTTGCCACAACTTCAGGTCAACGGCACTTCGAAAAAGGCATCGACGACG
CCAGCTTACCACCTATGCCTGATATTGACAACAGCTTGAAGGTGTGGTAT
ATGCCACTTCTAAATGCGAACAGCGATGACGACTGAAAGGGGCTTGTTGG
ACGTCATAGAGTGGTATATGCTGTCTGCGCACATAATTTTTTCAGATGAC
CGACATACCCCCTATCTGTCAACGCTGCAACAGCCGGGCGCTGGGGATTT
CAAACATCAAGGCCTCGAGCTATGGGTGCATGAAGGCGATCAGGGGCTAG
TATCTCTAGCGCCGGGTTCCTGCAGCAGCAGCAGCAGCAGCAGCAGCAGC
AGCAGCAGCAAATAATAGACCATACTACTATAAAATGCTTGCATATCTAC
CGGCCGAAGATATACTTCACTCTGGAACAGAATAGGGGACCAGAGGACCA
TGGGTTACTCGTGCCATGGATTCAGACAGCCCAAGGAACTCTTCGAAAGT
TGGATTTTCCCACAGGATGTCAGGAATTCACAGATTCACGCTGTTTCACC
TGCACTTTGTGAATGTGTGAATTTAGGCAACCCCTCCATCAACGTGAACG
TGAATCTGTGAACGGGAACCTGTGAACGTGAATCCTGTGAATCCGGTCAC
GTCTACCATTGTGTCTACCAAACACAGATAGAATGAA back to topCoding sequence (CDS) from alignment at ch2:3798078..3800464- >KJC3_002867-T1 ID=KJC3_002867-T1|Name=KJC3_002867-T1|organism=Aspergillus niger KJC3|type=CDS|length=5136bp|location=Sequence derived from alignment at ch2:3798078..3800464- (Aspergillus niger KJC3)
ACACTGTGAGCAGTACTGTATTGCATCCAATGGGGAATATAGTTGCCACA
ACTTCAGGTCAACGGCACTTCGAAAAAGGCATCGACGACGCCAGCTTACC
ACCTATGCCTGATATTGACAACAGCTTGAAGGTGTGGTATATGCCACTTC
TAAATGCGAACAGCGATGACGACTGAACCACCTGATATGCTAGAAGACAC
GGCCTCTCCCTGCGGCTTATCGCCATACTCTGTCTTGCCGTCAGCAGAAC
CGACCTATGCGACTGCCATGTACCCTTTCTTCTCCCTTCAGGACCCGTCG
ACGACATTATTTCTCTCATCTGTTCGAGACCATCCAATCAGATTGACATC
TGCTCTTGCTCCGACTTCTGTGGCGACTTATTCTCTGGTAAACCCAATGA
CAGAAGCCTTCATAACGCCTCATTCAATGATTTATCCATCTGCCCTGGGA
GGGAGCCAATTTCTCACTGGCTCAGACAGCCTGATTTGCCTCTTTGATGT
CTCTCGACCGGGTAACGATGGACCTGTCACTTCCATGCCGACAATACCAA
GCAAAAGAAAGCAACAGGTGGGTGGAGGCGTGGGAATGAAAGGAATCATC
TCTGCCATGGCCCTGGATCCGACAGGAGCTGGTATTTTAGCTGCTGGAAC
CTTCACCAGACATGTCGGACTTTATGGTGCACATGGAACAGGGGAGTCCC
TAGGGACATTCAGCATATCGAAAACAGAAGCCCACCGTCATATTGGCGGC
CGTGGAATCACTCAACTGCTGTGGAGCCCCTGCGGAAGGTACCTCTACGT
TGCTGAACGGAAAAGTGATGGAGTCTTAGTATATGATATCCGAGTCACTG
GACAACTGCTTGGATGGTTGCAGGGCCGCAAAGCTTTCACAAATCAACGG
TTGAAAATCGATGTATTCCCCAGTGGAGAAAACGGCTCGCATGAGATCTG
GGCTGGCGGAACCGATGGCTGCATGAGGGTGTGGCAGAACCCTACACATG
CTAGTGGTGCTCAGGATCCCAAGTGGGAATGGAAGGTTCATAACGGTCGG
CGGATGGAACCACTTTATTGACGGATTCCTCCGATCACCATATCAGAACC
TGGATCTTATGACTGAAGAACAAGGGCCTATCTGTGTTGCCTCTACCCGT
CAGGAGGGTGATGAGCATTGTCCAGGATTTGCAAGTCATTCTCTAAATTC
TCAAGACTCCACCTCCCTACAATCAAATGAGAAGCGCAGTCTCGGCCAAA
ACCCTAATACAACATATTTCAAGGGCGCAGAATGACACTGTGAGCAGTAC
TGTATTGCATCCAATGGGGAATATAGTTGCCACAACTTCAGGTCAACGGC
ACTTCGAAAAAGGCATCGACGACGCCAGCTTACCACCTATGCCTGATATT
GACAACAGCTTGAAGGTGTGGTATATGCCACTTCTAAATGCGAACAGCGA
TGACGACTGAACCACCTGATATGCTAGAAGACACGGCCTCTCCCTGCGGC
TTATCGCCATACTCTGTCTTGCCGTCAGCAGAACCGACCTATGCGACTGC
CATGTACCCTTTCTTCTCCCTTCAGGACCCGTCGACGACATTATTTCTCT
CATCTGTTCGAGACCATCCAATCAGATTGACATCTGCTCTTGCTCCGACT
TCTGTGGCGACTTATTCTCTGGTAAACCCAATGACAGAAGCCTTCATAAC
GCCTCATTCAATGATTTATCCATCTGCCCTGGGAGGGAGCCAATTTCTCA
CTGGCTCAGACAGCCTGATTTGCCTCTTTGATGTCTCTCGACCGGGTAAC
GATGGACCTGTCACTTCCATGCCGACAATACCAAGCAAAAGAAAGCAACA
GGTGGGTGGAGGCGTGGGAATGAAAGGAATCATCTCTGCCATGGCCCTGG
ATCCGACAGGAGCTGGTATTTTAGCTGCTGGAACCTTCACCAGACATGTC
GGACTTTATGGTGCACATGGAACAGGGGAGTCCCTAGGGACATTCAGCAT
ATCGAAAACAGAAGCCCACCGTCATATTGGCGGCCGTGGAATCACTCAAC
TGCTGTGGAGCCCCTGCGGAAGGTACCTCTACGTTGCTGAACGGAAAAGT
GATGGAGTCTTAGTATATGATATCCGAGTCACTGGACAACTGCTTGGATG
GTTGCAGGGCCGCAAAGCTTTCACAAATCAACGGTTGAAAATCGATGTAT
TCCCCAGTGGAGAAAACGGCTCGCATGAGATCTGGGCTGGCGGAACCGAT
GGCTGCATGAGGGTGTGGCAGAACCCTACACATGCTAGTGGTGCTCAGGA
TCCCAAGTGGGAATGGAAGGTTCATAACGGTCGGCGGATGGAACCACTTT
ATTGACGGATTCCTCCGATCACCATATCAGAACCTGGATCTTATGACTGA
AGAACAAGGGCCTATCTGTGTTGCCTCTACCCGTCAGGAGGGTGATGAGC
ATTGTCCAGGATTTGCAAGTCATTCTCTAAATTCTCAAGACTCCACCTCC
CTACAATCAAATGAGAAGCGCAGTCTCGGCCAAAACCCTAATACAACATA
TTTCAAGGGCGCAGAATGACACTGTGAGCAGTACTGTATTGCATCCAATG
GGGAATATAGTTGCCACAACTTCAGGTCAACGGCACTTCGAAAAAGGCAT
CGACGACGCCAGCTTACCACCTATGCCTGATATTGACAACAGCTTGAAGG
TGTGGTATATGCCACTTCTAAATGCGAACAGCGATGACGACTGAACCACC
TGATATGCTAGAAGACACGGCCTCTCCCTGCGGCTTATCGCCATACTCTG
TCTTGCCGTCAGCAGAACCGACCTATGCGACTGCCATGTACCCTTTCTTC
TCCCTTCAGGACCCGTCGACGACATTATTTCTCTCATCTGTTCGAGACCA
TCCAATCAGATTGACATCTGCTCTTGCTCCGACTTCTGTGGCGACTTATT
CTCTGGTAAACCCAATGACAGAAGCCTTCATAACGCCTCATTCAATGATT
TATCCATCTGCCCTGGGAGGGAGCCAATTTCTCACTGGCTCAGACAGCCT
GATTTGCCTCTTTGATGTCTCTCGACCGGGTAACGATGGACCTGTCACTT
CCATGCCGACAATACCAAGCAAAAGAAAGCAACAGGTGGGTGGAGGCGTG
GGAATGAAAGGAATCATCTCTGCCATGGCCCTGGATCCGACAGGAGCTGG
TATTTTAGCTGCTGGAACCTTCACCAGACATGTCGGACTTTATGGTGCAC
ATGGAACAGGGGAGTCCCTAGGGACATTCAGCATATCGAAAACAGAAGCC
CACCGTCATATTGGCGGCCGTGGAATCACTCAACTGCTGTGGAGCCCCTG
CGGAAGGTACCTCTACGTTGCTGAACGGAAAAGTGATGGAGTCTTAGTAT
ATGATATCCGAGTCACTGGACAACTGCTTGGATGGTTGCAGGGCCGCAAA
GCTTTCACAAATCAACGGTTGAAAATCGATGTATTCCCCAGTGGAGAAAA
CGGCTCGCATGAGATCTGGGCTGGCGGAACCGATGGCTGCATGAGGGTGT
GGCAGAACCCTACACATGCTAGTGGTGCTCAGGATCCCAAGTGGGAATGG
AAGGTTCATAACGGTCGGCGGATGGAACCACTTTATTGACGGATTCCTCC
GATCACCATATCAGAACCTGGATCTTATGACTGAAGAACAAGGGCCTATC
TGTGTTGCCTCTACCCGTCAGGAGGGTGATGAGCATTGTCCAGGATTTGC
AAGTCATTCTCTAAATTCTCAAGACTCCACCTCCCTACAATCAAATGAGA
AGCGCAGTCTCGGCCAAAACCCTAATACAACATATTTCAAGGGCGCAGAA
TGACACTGTGAGCAGTACTGTATTGCATCCAATGGGGAATATAGTTGCCA
CAACTTCAGGTCAACGGCACTTCGAAAAAGGCATCGACGACGCCAGCTTA
CCACCTATGCCTGATATTGACAACAGCTTGAAGGTGTGGTATATGCCACT
TCTAAATGCGAACAGCGATGACGACTGAACCACCTGATATGCTAGAAGAC
ACGGCCTCTCCCTGCGGCTTATCGCCATACTCTGTCTTGCCGTCAGCAGA
ACCGACCTATGCGACTGCCATGTACCCTTTCTTCTCCCTTCAGGACCCGT
CGACGACATTATTTCTCTCATCTGTTCGAGACCATCCAATCAGATTGACA
TCTGCTCTTGCTCCGACTTCTGTGGCGACTTATTCTCTGGTAAACCCAAT
GACAGAAGCCTTCATAACGCCTCATTCAATGATTTATCCATCTGCCCTGG
GAGGGAGCCAATTTCTCACTGGCTCAGACAGCCTGATTTGCCTCTTTGAT
GTCTCTCGACCGGGTAACGATGGACCTGTCACTTCCATGCCGACAATACC
AAGCAAAAGAAAGCAACAGGTGGGTGGAGGCGTGGGAATGAAAGGAATCA
TCTCTGCCATGGCCCTGGATCCGACAGGAGCTGGTATTTTAGCTGCTGGA
ACCTTCACCAGACATGTCGGACTTTATGGTGCACATGGAACAGGGGAGTC
CCTAGGGACATTCAGCATATCGAAAACAGAAGCCCACCGTCATATTGGCG
GCCGTGGAATCACTCAACTGCTGTGGAGCCCCTGCGGAAGGTACCTCTAC
GTTGCTGAACGGAAAAGTGATGGAGTCTTAGTATATGATATCCGAGTCAC
TGGACAACTGCTTGGATGGTTGCAGGGCCGCAAAGCTTTCACAAATCAAC
GGTTGAAAATCGATGTATTCCCCAGTGGAGAAAACGGCTCGCATGAGATC
TGGGCTGGCGGAACCGATGGCTGCATGAGGGTGTGGCAGAACCCTACACA
TGCTAGTGGTGCTCAGGATCCCAAGTGGGAATGGAAGGTTCATAACGGTC
GGCGGATGGAACCACTTTATTGACGGATTCCTCCGATCACCATATCAGAA
CCTGGATCTTATGACTGAAGAACAAGGGCCTATCTGTGTTGCCTCTACCC
GTCAGGAGGGTGATGAGCATTGTCCAGGATTTGCAAGTCATTCTCTAAAT
TCTCAAGACTCCACCTCCCTACAATCAAATGAGAAGCGCAGTCTCGGCCA
AAACCCTAATACAACATATTTCAAGGGCGCAGAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002867-T1.utr3p1 | KJC3_002867-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR015943 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3798078..3800464 - |
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