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KJC3_002872-T1, KJC3_002872-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002872-T1
Unique NameKJC3_002872-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3810120..3811461-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002872-T1 ID=KJC3_002872-T1|Name=KJC3_002872-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1342bp|location=Sequence derived from alignment at ch2:3810120..3811461- (Aspergillus niger KJC3)
CTGAAAACAAAGTCGGTATTAAAATGTCACAATCCGAACAGCCGAGCCAT
AGCTCGACTCCACGCTCGTTTACCAGCCAGACTGCGTCAGCAGAAGATCT
GCTTAAATCGCAGACAGTTGGTCTCGTCCATCTTTCCGACTTTCGCAAAC
GTCGCGCCGAGGTCTTGGAGCAAAAAGAGCGCGAAGCCCATGACAAATCC
CTAGGAAGATTCACCTCCAGAAGTGCAACTCCTTCGACTGGTGAAGTGAC
TGACGGGTAAGTTAAAGCGCATCTCCAGGAAATCCCGGCTTGTAACTGAT
CGCAAAGCGTAAAGCAACTCGACGCCACGCAGCGAGGGCCCGCCGAAGAA
GAAGAAAAAGAAGCCTATCACCAAAAGTAAACTTTCATTCGGCGATGATG
ATGAGGAGGAAGAGAACGATAGCACCGCTGATGTAGCGGCAACGCCGCGG
GATTCGAGTATTCCCCGCTCTGCTTCCAGGACCCCCGCCGACGACAGCTC
TGCGCCCTCATCGCGTCGCATTACGCCGAACCCAAATGCCCCGCCTCCTC
CGAAAGCAATGACAAAAGCTGCATTGAAGGCAGAGGCAGAGGCACGGGAT
GCGCTCCGCAAGGAGTTCCTTGCCATGCAGGAAGCCGTGAAGAATACAGA
GATATTAATCCCCTTTATATTCTTCGATGGGACCAACATACCTGCAGGGA
CAGTCAGGGTCAAGAAAGGCGATCACGTTTGGTTGTTCTTGGACCGCTGT
CGAAAGGTTGGAGCAGAATTGGGTGTTGGCGGTAACAGCGGAGCATCCAA
GGCTCGCAAAGACAATCGTCGCGAGTGGGCTCGAGTCAGTGTTGATGACC
TCATGTTGGTCAAAGGAGAAATCATCGTTCCACATGTATGTGTTCCACTA
TCCCGCATGGCTGTATACGCTGACTGGTACAGCATTACGAACTTTATTAT
TTCATCGCCAACAGTGTACCCGATTTCACAAAGGCGGGTGGTCTGTTGTT
CGATTATTCCAACAAACCACCTCCGGCGCCTTCAACAGACGATCCTTTAT
CGCGCCCGGAAAGCAGCCAACTAGAGGGTGCTGATAAAGATCCCTCTTTG
ACCAAAGTGGTTGATAGACGATGGTATGAGCGGAACAAACACATCTTTCC
GGCTAGTCTTTGGCGAGAATATGAACCAGGGCCCGAGTTTGAGGAGAAGA
TGCGGACGACGAGGCGTGATGCTTCTGGAAATACGTTCTTTTTCTAAACA
TATTCGGCGTGAAGCTTATGGCGCGGCTGATATAAATAAGAGCGTTGAGA
CCATAGATGATGTATATTCCTGAGATACCCAATAAAACCATA
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Coding sequence (CDS) from alignment at ch2:3810120..3811461-

>KJC3_002872-T1 ID=KJC3_002872-T1|Name=KJC3_002872-T1|organism=Aspergillus niger KJC3|type=CDS|length=3357bp|location=Sequence derived from alignment at ch2:3810120..3811461- (Aspergillus niger KJC3)
CATTACGAACTTTATTATTTCATCGCCAACAGTGTACCCGATTTCACAAA
GGCGGGTGGTCTGTTGTTCGATTATTCCAACAAACCACCTCCGGCGCCTT
CAACAGACGATCCTTTATCGCGCCCGGAAAGCAGCCAACTAGAGGGTGCT
GATAAAGATCCCTCTTTGACCAAAGTGGTTGATAGACGATGGTATGAGCG
GAACAAACACATCTTTCCGGCTAGTCTTTGGCGAGAATATGAACCAGGGC
CCGAGTTTGAGGAGAAGATGCGGACGACGAGGCGTGATGCTTCTGGAAAT
ACGTTCTTTTTCTAACAACTCGACGCCACGCAGCGAGGGCCCGCCGAAGA
AGAAGAAAAAGAAGCCTATCACCAAAAGTAAACTTTCATTCGGCGATGAT
GATGAGGAGGAAGAGAACGATAGCACCGCTGATGTAGCGGCAACGCCGCG
GGATTCGAGTATTCCCCGCTCTGCTTCCAGGACCCCCGCCGACGACAGCT
CTGCGCCCTCATCGCGTCGCATTACGCCGAACCCAAATGCCCCGCCTCCT
CCGAAAGCAATGACAAAAGCTGCATTGAAGGCAGAGGCAGAGGCACGGGA
TGCGCTCCGCAAGGAGTTCCTTGCCATGCAGGAAGCCGTGAAGAATACAG
AGATATTAATCCCCTTTATATTCTTCGATGGGACCAACATACCTGCAGGG
ACAGTCAGGGTCAAGAAAGGCGATCACGTTTGGTTGTTCTTGGACCGCTG
TCGAAAGGTTGGAGCAGAATTGGGTGTTGGCGGTAACAGCGGAGCATCCA
AGGCTCGCAAAGACAATCGTCGCGAGTGGGCTCGAGTCAGTGTTGATGAC
CTCATGTTGGTCAAAGGAGAAATCATCGTTCCACATATGTCACAATCCGA
ACAGCCGAGCCATAGCTCGACTCCACGCTCGTTTACCAGCCAGACTGCGT
CAGCAGAAGATCTGCTTAAATCGCAGACAGTTGGTCTCGTCCATCTTTCC
GACTTTCGCAAACGTCGCGCCGAGGTCTTGGAGCAAAAAGAGCGCGAAGC
CCATGACAAATCCCTAGGAAGATTCACCTCCAGAAGTGCAACTCCTTCGA
CTGGTGAAGTGACTGACGGCATTACGAACTTTATTATTTCATCGCCAACA
GTGTACCCGATTTCACAAAGGCGGGTGGTCTGTTGTTCGATTATTCCAAC
AAACCACCTCCGGCGCCTTCAACAGACGATCCTTTATCGCGCCCGGAAAG
CAGCCAACTAGAGGGTGCTGATAAAGATCCCTCTTTGACCAAAGTGGTTG
ATAGACGATGGTATGAGCGGAACAAACACATCTTTCCGGCTAGTCTTTGG
CGAGAATATGAACCAGGGCCCGAGTTTGAGGAGAAGATGCGGACGACGAG
GCGTGATGCTTCTGGAAATACGTTCTTTTTCTAACAACTCGACGCCACGC
AGCGAGGGCCCGCCGAAGAAGAAGAAAAAGAAGCCTATCACCAAAAGTAA
ACTTTCATTCGGCGATGATGATGAGGAGGAAGAGAACGATAGCACCGCTG
ATGTAGCGGCAACGCCGCGGGATTCGAGTATTCCCCGCTCTGCTTCCAGG
ACCCCCGCCGACGACAGCTCTGCGCCCTCATCGCGTCGCATTACGCCGAA
CCCAAATGCCCCGCCTCCTCCGAAAGCAATGACAAAAGCTGCATTGAAGG
CAGAGGCAGAGGCACGGGATGCGCTCCGCAAGGAGTTCCTTGCCATGCAG
GAAGCCGTGAAGAATACAGAGATATTAATCCCCTTTATATTCTTCGATGG
GACCAACATACCTGCAGGGACAGTCAGGGTCAAGAAAGGCGATCACGTTT
GGTTGTTCTTGGACCGCTGTCGAAAGGTTGGAGCAGAATTGGGTGTTGGC
GGTAACAGCGGAGCATCCAAGGCTCGCAAAGACAATCGTCGCGAGTGGGC
TCGAGTCAGTGTTGATGACCTCATGTTGGTCAAAGGAGAAATCATCGTTC
CACATATGTCACAATCCGAACAGCCGAGCCATAGCTCGACTCCACGCTCG
TTTACCAGCCAGACTGCGTCAGCAGAAGATCTGCTTAAATCGCAGACAGT
TGGTCTCGTCCATCTTTCCGACTTTCGCAAACGTCGCGCCGAGGTCTTGG
AGCAAAAAGAGCGCGAAGCCCATGACAAATCCCTAGGAAGATTCACCTCC
AGAAGTGCAACTCCTTCGACTGGTGAAGTGACTGACGGCATTACGAACTT
TATTATTTCATCGCCAACAGTGTACCCGATTTCACAAAGGCGGGTGGTCT
GTTGTTCGATTATTCCAACAAACCACCTCCGGCGCCTTCAACAGACGATC
CTTTATCGCGCCCGGAAAGCAGCCAACTAGAGGGTGCTGATAAAGATCCC
TCTTTGACCAAAGTGGTTGATAGACGATGGTATGAGCGGAACAAACACAT
CTTTCCGGCTAGTCTTTGGCGAGAATATGAACCAGGGCCCGAGTTTGAGG
AGAAGATGCGGACGACGAGGCGTGATGCTTCTGGAAATACGTTCTTTTTC
TAACAACTCGACGCCACGCAGCGAGGGCCCGCCGAAGAAGAAGAAAAAGA
AGCCTATCACCAAAAGTAAACTTTCATTCGGCGATGATGATGAGGAGGAA
GAGAACGATAGCACCGCTGATGTAGCGGCAACGCCGCGGGATTCGAGTAT
TCCCCGCTCTGCTTCCAGGACCCCCGCCGACGACAGCTCTGCGCCCTCAT
CGCGTCGCATTACGCCGAACCCAAATGCCCCGCCTCCTCCGAAAGCAATG
ACAAAAGCTGCATTGAAGGCAGAGGCAGAGGCACGGGATGCGCTCCGCAA
GGAGTTCCTTGCCATGCAGGAAGCCGTGAAGAATACAGAGATATTAATCC
CCTTTATATTCTTCGATGGGACCAACATACCTGCAGGGACAGTCAGGGTC
AAGAAAGGCGATCACGTTTGGTTGTTCTTGGACCGCTGTCGAAAGGTTGG
AGCAGAATTGGGTGTTGGCGGTAACAGCGGAGCATCCAAGGCTCGCAAAG
ACAATCGTCGCGAGTGGGCTCGAGTCAGTGTTGATGACCTCATGTTGGTC
AAAGGAGAAATCATCGTTCCACATATGTCACAATCCGAACAGCCGAGCCA
TAGCTCGACTCCACGCTCGTTTACCAGCCAGACTGCGTCAGCAGAAGATC
TGCTTAAATCGCAGACAGTTGGTCTCGTCCATCTTTCCGACTTTCGCAAA
CGTCGCGCCGAGGTCTTGGAGCAAAAAGAGCGCGAAGCCCATGACAAATC
CCTAGGAAGATTCACCTCCAGAAGTGCAACTCCTTCGACTGGTGAAGTGA
CTGACGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002872KJC3_002872Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002872-T1KJC3_002872-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002872-T1.cdsKJC3_002872-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002872-T1.utr3p1KJC3_002872-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002872-T1.exon3KJC3_002872-T1.exon3Aspergillus niger KJC3exon
KJC3_002872-T1.exon2KJC3_002872-T1.exon2Aspergillus niger KJC3exon
KJC3_002872-T1.exon1KJC3_002872-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002872-T1.utr5p1KJC3_002872-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007005
DBxrefPFAM:PF04921
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3810120..3811461 -
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