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KJC3_002873-T1, KJC3_002873-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002873-T1
Unique NameKJC3_002873-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3811575..3813238+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002873-T1 ID=KJC3_002873-T1|Name=KJC3_002873-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1664bp|location=Sequence derived from alignment at ch2:3811575..3813238+ (Aspergillus niger KJC3)
CCTTGAGGAAAGAAATACTCTCGTCAATTGTTGTTTTTTATGCTACATTC
TTGCTCTACTTCTTTTGGCAGGATAAAATCTGCGAGTTTGAGAATCTTAT
CATTTTAGATTCGCGACTTTAGTATCCCAGCCAACCAGCAGCACAAGAAC
AAACAAATCAAAGCCGACGACCTGCGAATCTCCGCAGGATCGCCGCCGAC
AGAAACGCATCCCGTCACTTCTCCTACCTTTTCTACGTTTACTCGGTCGC
AGATCCCAAACATGATGATGGAAGACGAAGATGATGATTTTTATGACCCC
GCCGATGCGGTGCCTGTAACTCAGCATCAAAACGGGTCTCAGCATCCCCA
GGCAGATTCAGGACCCCACGACGCCAATGATGCGGAAGAGGAGGAGATAG
AGGTGGAAGAAGATGAGGTATGCGCATGGCGACAACTAATCTATCTTGTT
ACTGTCGCTAACTCTCGCGTAGGATGACTTCAATATTATTACCGAAGCAC
CAGCAGACGCACCCCCTCCGGAAGTGTAAGTCCGCTACCTCTGTTCAACG
CATTTCACCTTGTTAATTTATTGAACAGCCCACATCCTCGTCACGCCAGC
CTCCGCGCGGAGTCTCAAAGACCCTCCTCTGCAGATGTCTCTACGATATC
AAAATCAATAACACCCACCGTTACCCCTAAACTTGAATCTGCTACCCCTG
TGCCTGCTACTGCAAGGCCTACGGTCCCTCAGAAGCCCGGTTCCGCCTAC
CCTCCAGTCCATGCGTCGAATATCGATGTCCACGCGAACCCTATCCATCC
GGCGACCGGTAAACCAATCATGTCAACAGACATGGACACCGACTTCCCAG
AGGATGACAAGCCTTGGAGGCGGCCAGGCTCCGACATTACGGATTATTTC
AACTACGGGTTTGACGAGTTCACGTGGGCCAGCTATGTGTTGAAGCAACA
GGAGCTACGCAAGGAAATTGGAGATCAGAAGAAACAATTGGATGATATGC
AAGCCTTCTTAAGCATGGGGCTCCCACCAATGCCCGGAGGTCCTCCGGGA
CCAGGAGGACCTCCAGGAAGCGCACCGCCTCCTATGCCCGGCATGCCTGG
GATGCCGGATATGTCACAAGAGATGATGCAAGGCATGCTGACGAGCATGA
TGTCACAAGGCCTGGACCCCTCATCCATGGATCCTATGGCATTTATGCAG
CATGCGCAGGCCATGATGGGTGGACAACCCGGCGCAGGCGGCGGACAACA
AGGTCAACCCGGATTTGGTGGGCAAGGTGGTGGCCAGCCTCAGATGGGAT
ACGGGGGCGGCTTTGGTCGGGGTCGCGGGAGAAGGTGGTAAAGCTAAGGT
GGATCCGAACCTGCGATCATGTTATAATATCGAATACCTTGTCGAAAGCT
CAGCATTGGTGATTCAAGCGGAGTCCTAGAATCAGTAGTAAACCTATCCA
TAAATGAATTACTCCCGAAGGCTAAGCTTCTTGTGCGGATCTGGGGTCGG
GTTGCTCGGGGAAAGGGAGCTACTAATCGAGTGCAATGTCATTGTTGCTC
ATCATCAGACATCAGGACCAAGTACTCTCAATCTTGTAAAGGAAACAATA
TTTTTCTGTAATGTTCAAGCGAGCTAAGTACATTGGAAAAGAGCACGCTG
TGATCAGAATGATA
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Coding sequence (CDS) from alignment at ch2:3811575..3813238+

>KJC3_002873-T1 ID=KJC3_002873-T1|Name=KJC3_002873-T1|organism=Aspergillus niger KJC3|type=CDS|length=2916bp|location=Sequence derived from alignment at ch2:3811575..3813238+ (Aspergillus niger KJC3)
ATGATGATGGAAGACGAAGATGATGATTTTTATGACCCCGCCGATGCGGT
GCCTGTAACTCAGCATCAAAACGGGTCTCAGCATCCCCAGGCAGATTCAG
GACCCCACGACGCCAATGATGCGGAAGAGGAGGAGATAGAGGTGGAAGAA
GATGAGGATGACTTCAATATTATTACCGAAGCACCAGCAGACGCACCCCC
TCCGGAAGTCCCACATCCTCGTCACGCCAGCCTCCGCGCGGAGTCTCAAA
GACCCTCCTCTGCAGATGTCTCTACGATATCAAAATCAATAACACCCACC
GTTACCCCTAAACTTGAATCTGCTACCCCTGTGCCTGCTACTGCAAGGCC
TACGGTCCCTCAGAAGCCCGGTTCCGCCTACCCTCCAGTCCATGCGTCGA
ATATCGATGTCCACGCGAACCCTATCCATCCGGCGACCGGTAAACCAATC
ATGTCAACAGACATGGACACCGACTTCCCAGAGGATGACAAGCCTTGGAG
GCGGCCAGGCTCCGACATTACGGATTATTTCAACTACGGGTTTGACGAGT
TCACGTGGGCCAGCTATGTGTTGAAGCAACAGGAGCTACGCAAGGAAATT
GGAGATCAGAAGAAACAATTGGATGATATGCAAGCCTTCTTAAGCATGGG
GCTCCCACCAATGCCCGGAGGTCCTCCGGGACCAGGAGGACCTCCAGGAA
GCGCACCGCCTCCTATGCCCGGCATGCCTGGGATGCCGGATATGTCACAA
GAGATGATGCAAGGCATGCTGACGAGCATGATGTCACAAGGCCTGGACCC
CTCATCCATGGATCCTATGGCATTTATGCAGCATGCGCAGGCCATGATGG
GTGGACAACCCGGCGCAGGCGGCGGACAACAAGGTCAACCCGGATTTGGT
GGGCAAGGTGGTGGCCAGCCTCAGATGGGATACGGGGGCGGCTTTGGTCG
GGGTCGCGGGAGAAGGTGGTAAATGATGATGGAAGACGAAGATGATGATT
TTTATGACCCCGCCGATGCGGTGCCTGTAACTCAGCATCAAAACGGGTCT
CAGCATCCCCAGGCAGATTCAGGACCCCACGACGCCAATGATGCGGAAGA
GGAGGAGATAGAGGTGGAAGAAGATGAGGATGACTTCAATATTATTACCG
AAGCACCAGCAGACGCACCCCCTCCGGAAGTCCCACATCCTCGTCACGCC
AGCCTCCGCGCGGAGTCTCAAAGACCCTCCTCTGCAGATGTCTCTACGAT
ATCAAAATCAATAACACCCACCGTTACCCCTAAACTTGAATCTGCTACCC
CTGTGCCTGCTACTGCAAGGCCTACGGTCCCTCAGAAGCCCGGTTCCGCC
TACCCTCCAGTCCATGCGTCGAATATCGATGTCCACGCGAACCCTATCCA
TCCGGCGACCGGTAAACCAATCATGTCAACAGACATGGACACCGACTTCC
CAGAGGATGACAAGCCTTGGAGGCGGCCAGGCTCCGACATTACGGATTAT
TTCAACTACGGGTTTGACGAGTTCACGTGGGCCAGCTATGTGTTGAAGCA
ACAGGAGCTACGCAAGGAAATTGGAGATCAGAAGAAACAATTGGATGATA
TGCAAGCCTTCTTAAGCATGGGGCTCCCACCAATGCCCGGAGGTCCTCCG
GGACCAGGAGGACCTCCAGGAAGCGCACCGCCTCCTATGCCCGGCATGCC
TGGGATGCCGGATATGTCACAAGAGATGATGCAAGGCATGCTGACGAGCA
TGATGTCACAAGGCCTGGACCCCTCATCCATGGATCCTATGGCATTTATG
CAGCATGCGCAGGCCATGATGGGTGGACAACCCGGCGCAGGCGGCGGACA
ACAAGGTCAACCCGGATTTGGTGGGCAAGGTGGTGGCCAGCCTCAGATGG
GATACGGGGGCGGCTTTGGTCGGGGTCGCGGGAGAAGGTGGTAAATGATG
ATGGAAGACGAAGATGATGATTTTTATGACCCCGCCGATGCGGTGCCTGT
AACTCAGCATCAAAACGGGTCTCAGCATCCCCAGGCAGATTCAGGACCCC
ACGACGCCAATGATGCGGAAGAGGAGGAGATAGAGGTGGAAGAAGATGAG
GATGACTTCAATATTATTACCGAAGCACCAGCAGACGCACCCCCTCCGGA
AGTCCCACATCCTCGTCACGCCAGCCTCCGCGCGGAGTCTCAAAGACCCT
CCTCTGCAGATGTCTCTACGATATCAAAATCAATAACACCCACCGTTACC
CCTAAACTTGAATCTGCTACCCCTGTGCCTGCTACTGCAAGGCCTACGGT
CCCTCAGAAGCCCGGTTCCGCCTACCCTCCAGTCCATGCGTCGAATATCG
ATGTCCACGCGAACCCTATCCATCCGGCGACCGGTAAACCAATCATGTCA
ACAGACATGGACACCGACTTCCCAGAGGATGACAAGCCTTGGAGGCGGCC
AGGCTCCGACATTACGGATTATTTCAACTACGGGTTTGACGAGTTCACGT
GGGCCAGCTATGTGTTGAAGCAACAGGAGCTACGCAAGGAAATTGGAGAT
CAGAAGAAACAATTGGATGATATGCAAGCCTTCTTAAGCATGGGGCTCCC
ACCAATGCCCGGAGGTCCTCCGGGACCAGGAGGACCTCCAGGAAGCGCAC
CGCCTCCTATGCCCGGCATGCCTGGGATGCCGGATATGTCACAAGAGATG
ATGCAAGGCATGCTGACGAGCATGATGTCACAAGGCCTGGACCCCTCATC
CATGGATCCTATGGCATTTATGCAGCATGCGCAGGCCATGATGGGTGGAC
AACCCGGCGCAGGCGGCGGACAACAAGGTCAACCCGGATTTGGTGGGCAA
GGTGGTGGCCAGCCTCAGATGGGATACGGGGGCGGCTTTGGTCGGGGTCG
CGGGAGAAGGTGGTAA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
FIP1KJC3_002873Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002873-T1KJC3_002873-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002873-T1.utr5p1KJC3_002873-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002873-T1.exon1KJC3_002873-T1.exon1Aspergillus niger KJC3exon
KJC3_002873-T1.exon2KJC3_002873-T1.exon2Aspergillus niger KJC3exon
KJC3_002873-T1.exon3KJC3_002873-T1.exon3Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002873-T1.cdsKJC3_002873-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002873-T1.utr3p1KJC3_002873-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264OAU
DBxrefInterPro:IPR007854
DBxrefPFAM:PF05182
Productcleavage polyadenylation factor subunit fip1
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3811575..3813238 +
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