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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3826246..3827439+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002879-T1 ID=KJC3_002879-T1|Name=KJC3_002879-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1194bp|location=Sequence derived from alignment at ch2:3826246..3827439+ (Aspergillus niger KJC3)
ATGGCGTCAAGTAAGTCGCGAATTGTTTCCATGGCAATCCTCTTCCACTG
ACTAGTGTTAGATCAATTCTCTGTCGCATCCCCGCCGACGGATGCTATCT
CCGCCTTGAAGTTCTCGCCCGACCCCGACTCCACGCGAATCGTTGTTTCT
TCCTGGGATAAGAACGTGTATCTGTACGACTTGCGCGATGAAAATGGTAC
CGTCGGAGAAGGCAAGCTGTTACAGAAGTTTGAGCATCGCGCTCCGGTGT
TGGATGTGTGTTTCGGCGCAACCGAGGATGAGATCTACACGGCTGGCTTG
GATTGGGACGTCAAGAAGTGAGTCCATGTCTGTTCTGTTTGGGCTTCGGT
AGCAACCAGCGCATAACCAACCTATTCCCTGCTGACAATAAACAGAATTG
ATGTAGCATCATCCACCCAGACCGTCCTCAGCAGCCACGAAGCTGGTGTT
CGAAGCGTCGTTTTCAGCAAGGAACACAACCTAGTAATATCCGCCTCTTG
GGACTCCACGTTGCATGTGCACCCGACGAACGATCCCGCCACAGCCCCCG
CTATCATTCCCCTCCCCTCGAAGCCCTTCTCCATGTCTCTTACCGCTACG
AAGCTCGTTGTCGCAATGGCTTCCCGCGCCCTACACATCTACGATCTGAA
AGCATTGGCTATGCTCACCGCTCAGTCGGAGGGTACGGTCCCCAACAAGA
TTGAAATCGAACCCTGGCAGCGAAGGGAGAGCAGCTTGAAGTTCATGACT
CGCTCAGTGGCATGCATGCCCGACGATGCAGGATACGCGTCATCCAGCAT
CGAGGGCCGTGTCGCGGTCGAATGGTTCGATCCGTCTGCTGAGTCGCAAG
CCCGCAAATATGCCTTCAAGTGTCACAGACAGACGGCGGATGATGTCGAC
GTCGTTTACCCTGTCAATGCGCTTGCGTTCCACCCGGTCCACGGTACGTT
TGCTTCGGGCGGTGGTGATGGAGTGGTTGCGCTTTGGGACGGTATTGCGA
AGAGGAGAATCAGACAGTATCAGAAGTATCCGTCGAGTGTGGCTGCTGTG
GACTTTAGCGGTAACGGAAAGTACCTGGCGATCGCGATTAGTCCGGGCTT
CGAGGATGGAAAAGATGATGTTGTCGAAGGGACGGTTAAGATCTTTGTAC
GTGAGCTTGGAGAGACGGAGGCGAAGGGGAAGGGCGCCAAATAA back to topCoding sequence (CDS) from alignment at ch2:3826246..3827439+ >KJC3_002879-T1 ID=KJC3_002879-T1|Name=KJC3_002879-T1|organism=Aspergillus niger KJC3|type=CDS|length=3195bp|location=Sequence derived from alignment at ch2:3826246..3827439+ (Aspergillus niger KJC3)
ATGGCGTCAAATCAATTCTCTGTCGCATCCCCGCCGACGGATGCTATCTC
CGCCTTGAAGTTCTCGCCCGACCCCGACTCCACGCGAATCGTTGTTTCTT
CCTGGGATAAGAACGTGTATCTGTACGACTTGCGCGATGAAAATGGTACC
GTCGGAGAAGGCAAGCTGTTACAGAAGTTTGAGCATCGCGCTCCGGTGTT
GGATGTGTGTTTCGGCGCAACCGAGGATGAGATCTACACGGCTGGCTTGG
ATTGGGACGTCAAGAAAATTGATGTAGCATCATCCACCCAGACCGTCCTC
AGCAGCCACGAAGCTGGTGTTCGAAGCGTCGTTTTCAGCAAGGAACACAA
CCTAGTAATATCCGCCTCTTGGGACTCCACGTTGCATGTGCACCCGACGA
ACGATCCCGCCACAGCCCCCGCTATCATTCCCCTCCCCTCGAAGCCCTTC
TCCATGTCTCTTACCGCTACGAAGCTCGTTGTCGCAATGGCTTCCCGCGC
CCTACACATCTACGATCTGAAAGCATTGGCTATGCTCACCGCTCAGTCGG
AGGGTACGGTCCCCAACAAGATTGAAATCGAACCCTGGCAGCGAAGGGAG
AGCAGCTTGAAGTTCATGACTCGCTCAGTGGCATGCATGCCCGACGATGC
AGGATACGCGTCATCCAGCATCGAGGGCCGTGTCGCGGTCGAATGGTTCG
ATCCGTCTGCTGAGTCGCAAGCCCGCAAATATGCCTTCAAGTGTCACAGA
CAGACGGCGGATGATGTCGACGTCGTTTACCCTGTCAATGCGCTTGCGTT
CCACCCGGTCCACGGTACGTTTGCTTCGGGCGGTGGTGATGGAGTGGTTG
CGCTTTGGGACGGTATTGCGAAGAGGAGAATCAGACAGTATCAGAAGTAT
CCGTCGAGTGTGGCTGCTGTGGACTTTAGCGGTAACGGAAAGTACCTGGC
GATCGCGATTAGTCCGGGCTTCGAGGATGGAAAAGATGATGTTGTCGAAG
GGACGGTTAAGATCTTTGTACGTGAGCTTGGAGAGACGGAGGCGAAGGGG
AAGGGCGCCAAATAAATGGCGTCAAATCAATTCTCTGTCGCATCCCCGCC
GACGGATGCTATCTCCGCCTTGAAGTTCTCGCCCGACCCCGACTCCACGC
GAATCGTTGTTTCTTCCTGGGATAAGAACGTGTATCTGTACGACTTGCGC
GATGAAAATGGTACCGTCGGAGAAGGCAAGCTGTTACAGAAGTTTGAGCA
TCGCGCTCCGGTGTTGGATGTGTGTTTCGGCGCAACCGAGGATGAGATCT
ACACGGCTGGCTTGGATTGGGACGTCAAGAAAATTGATGTAGCATCATCC
ACCCAGACCGTCCTCAGCAGCCACGAAGCTGGTGTTCGAAGCGTCGTTTT
CAGCAAGGAACACAACCTAGTAATATCCGCCTCTTGGGACTCCACGTTGC
ATGTGCACCCGACGAACGATCCCGCCACAGCCCCCGCTATCATTCCCCTC
CCCTCGAAGCCCTTCTCCATGTCTCTTACCGCTACGAAGCTCGTTGTCGC
AATGGCTTCCCGCGCCCTACACATCTACGATCTGAAAGCATTGGCTATGC
TCACCGCTCAGTCGGAGGGTACGGTCCCCAACAAGATTGAAATCGAACCC
TGGCAGCGAAGGGAGAGCAGCTTGAAGTTCATGACTCGCTCAGTGGCATG
CATGCCCGACGATGCAGGATACGCGTCATCCAGCATCGAGGGCCGTGTCG
CGGTCGAATGGTTCGATCCGTCTGCTGAGTCGCAAGCCCGCAAATATGCC
TTCAAGTGTCACAGACAGACGGCGGATGATGTCGACGTCGTTTACCCTGT
CAATGCGCTTGCGTTCCACCCGGTCCACGGTACGTTTGCTTCGGGCGGTG
GTGATGGAGTGGTTGCGCTTTGGGACGGTATTGCGAAGAGGAGAATCAGA
CAGTATCAGAAGTATCCGTCGAGTGTGGCTGCTGTGGACTTTAGCGGTAA
CGGAAAGTACCTGGCGATCGCGATTAGTCCGGGCTTCGAGGATGGAAAAG
ATGATGTTGTCGAAGGGACGGTTAAGATCTTTGTACGTGAGCTTGGAGAG
ACGGAGGCGAAGGGGAAGGGCGCCAAATAAATGGCGTCAAATCAATTCTC
TGTCGCATCCCCGCCGACGGATGCTATCTCCGCCTTGAAGTTCTCGCCCG
ACCCCGACTCCACGCGAATCGTTGTTTCTTCCTGGGATAAGAACGTGTAT
CTGTACGACTTGCGCGATGAAAATGGTACCGTCGGAGAAGGCAAGCTGTT
ACAGAAGTTTGAGCATCGCGCTCCGGTGTTGGATGTGTGTTTCGGCGCAA
CCGAGGATGAGATCTACACGGCTGGCTTGGATTGGGACGTCAAGAAAATT
GATGTAGCATCATCCACCCAGACCGTCCTCAGCAGCCACGAAGCTGGTGT
TCGAAGCGTCGTTTTCAGCAAGGAACACAACCTAGTAATATCCGCCTCTT
GGGACTCCACGTTGCATGTGCACCCGACGAACGATCCCGCCACAGCCCCC
GCTATCATTCCCCTCCCCTCGAAGCCCTTCTCCATGTCTCTTACCGCTAC
GAAGCTCGTTGTCGCAATGGCTTCCCGCGCCCTACACATCTACGATCTGA
AAGCATTGGCTATGCTCACCGCTCAGTCGGAGGGTACGGTCCCCAACAAG
ATTGAAATCGAACCCTGGCAGCGAAGGGAGAGCAGCTTGAAGTTCATGAC
TCGCTCAGTGGCATGCATGCCCGACGATGCAGGATACGCGTCATCCAGCA
TCGAGGGCCGTGTCGCGGTCGAATGGTTCGATCCGTCTGCTGAGTCGCAA
GCCCGCAAATATGCCTTCAAGTGTCACAGACAGACGGCGGATGATGTCGA
CGTCGTTTACCCTGTCAATGCGCTTGCGTTCCACCCGGTCCACGGTACGT
TTGCTTCGGGCGGTGGTGATGGAGTGGTTGCGCTTTGGGACGGTATTGCG
AAGAGGAGAATCAGACAGTATCAGAAGTATCCGTCGAGTGTGGCTGCTGT
GGACTTTAGCGGTAACGGAAAGTACCTGGCGATCGCGATTAGTCCGGGCT
TCGAGGATGGAAAAGATGATGTTGTCGAAGGGACGGTTAAGATCTTTGTA
CGTGAGCTTGGAGAGACGGAGGCGAAGGGGAAGGGCGCCAAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3826246..3827439 + |
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