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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3831393..3833446+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002882-T1 ID=KJC3_002882-T1|Name=KJC3_002882-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2054bp|location=Sequence derived from alignment at ch2:3831393..3833446+ (Aspergillus niger KJC3)
ACCTGGTATTAAGTAATCATTTTGATCTGCATTACACAAAACTATTCTGT
TGATTTCACACCCCCGCCGAAGCAAGATCTCCCCGATGTTGCGGACCGAC
CCAGTCCCATTCAAGCACTAGTACATACTGCCTTATAACATGACCTGGAA
TCTGCGTGGATTAGTACCAGGGCAGAATGACACCAAGCCGCCGGTCTTTC
TAAAGTGGAGGTCATCTAATGCTTTTATTATCTTCGTGGTGGTTTTCGCT
GTCTTCACGGTATGCTTGGCTTAGCTTAGCTCCTCGGACCTTTGATCCGT
TTCTAGCTACACTTGCTAACCACCACATGTTCAATAGGATGTTTTACTCT
ATGGGTTGGTACGTGGCTTGAGTGTACCGGTGGATTTGTTATAAATGGGT
TCTTCATCTTGCTGACATATAACTCTATCGTAGATTGTCCCTGTGGCTCC
TACCGCTTTACATGAGAGGGTTGGGATGTCTGTTGATCAAGGTGAGTTGA
TCATTTCTGACTTCTTTTCTCTATATAGATAGTGAGTTGATGCTGACTAT
AACATGGGGTAGAACAATCATGGACGTCGATATTGTTAGCATTGTATGGC
GCAGCGCTGTTAGCAGCATCGCGTAAGTATCGCTCTGACCACCTTATTAT
GATGAATGTCCTTGCTGAAACTATGTTCTCCAGCCGTTGCGGGTTACATT
GCCGACCGCTTTGAATCACGATGGTGGCCACTCATAGTCGGATTGCTGGC
ACTGGGCGCTTCCACAGCTCTACTCTGCGTAGGGACTCACCTTAGTCTCT
GGATCATTGGCCGTCTCTTCCAGGGAGCATCTGCAGCGGTTGTATGGACG
GTTGGGGCCGCGTTGCTCGTTGACACGGTTGGAAAAGAGGGCCTTGGGCA
GGCGATGGGTTATATCGGCATGGGTATGACCTTTGGAATCATGGGTGGGC
CACTTCTAGGTGGCGTCATCTACGCCCGTGGCGGATACTATGCCGTTTTT
GCGCTGGCATTTGCTCTTGTTGGCGTAGATATTGTTTTGCGGCTGGTCAT
GATCGAGAAGAAGCATGCCGTGAAGTGGTTGCAGCAAGAAAAGAAACAGA
GTCCGGATATTTCGCCGTCGGAAACCACTGAGAAATGCTCTGATGTGGAA
GATGCTACTGATCGGTCGCCCGCTGTTGCATCTGATAGTAAGTCGGAGGG
CCCGGTTTCAGTTGACCAGCAGTCTGCTGAATCCCCTGAACATGCAACTC
CCAAGAAGAGTAGAAGCGCTGTCATTACTCTTCTCGCTTCAGAACGCATG
ATAGTCACCATCTGGGCTTACTTCATCGTCTCCGTGGTCCTGACCTCATT
CGACAGCGTCCTTCCTCTCTTTGTCGAGGACACCTTCGGTTGGGATCAGA
CAGGCCAGGGGCTCATTTTTGTGCCCTTGTCCGTTCCTCATATTTCCGAT
CCGTTCTTCGGCTGGATCAACGACAAGTTTGTGAACGCAAGACGCTACAT
GGCGGCAGGAGCACTATTTTCAACCATTCCATTCATGGTGCTGCTCCGTC
TTGTGACGCATGACTCCATGGGCCAGAAGGTGTTGTTATGTGCATTGCTG
GTCCTTATTGGCTTTTGCATAGCCTCGCTGATGCCTCCTCTATTGGTTGA
GGCGTCCTATATTGTGGAGGAAAAGGAGGCACGGGACCCCAATATCTTTG
GTAAGGGTGGTGCCATGGCCTTGTCTTATGGAATCCTCAACTCGGCATAT
GCTGCTGGAACCATTGTTGGCCCCTTTTTTGCGGGGTTTATCCGGCAAAG
TGCGGGCTGGAAGACCATGACGTGGGCTTTGGCCTTGCTGACTGGGGTAT
CCGGTGTGCCTATTTTGTTGTTCCTGGGTGGGTTTCTGTTTAGGAAGAGG
AGAAGTGAAACGGCTGCATCGGTTGAGTGATTGACCAAAACGAGGGGAAG
AAAAAAAGGGGAATGAACGGGATTAGACGGATCATGACATATCATGGTGT
ATATACATAATGTCTGGTAATAGAATTCTCATCTCAATAGACATAAAATT
GACA back to topCoding sequence (CDS) from alignment at ch2:3831393..3833446+ >KJC3_002882-T1 ID=KJC3_002882-T1|Name=KJC3_002882-T1|organism=Aspergillus niger KJC3|type=CDS|length=7530bp|location=Sequence derived from alignment at ch2:3831393..3833446+ (Aspergillus niger KJC3)
ATGACCTGGAATCTGCGTGGATTAGTACCAGGGCAGAATGACACCAAGCC
GCCGGTCTTTCTAAAGTGGAGGTCATCTAATGCTTTTATTATCTTCGTGG
TGGTTTTCGCTGTCTTCACGGATGTTTTACTCTATGGGTTGATTGTCCCT
GTGGCTCCTACCGCTTTACATGAGAGGGTTGGGATGTCTGTTGATCAAGA
ACAATCATGGACGTCGATATTGTTAGCATTGTATGGCGCAGCGCTGTTAG
CAGCATCGCCCGTTGCGGGTTACATTGCCGACCGCTTTGAATCACGATGG
TGGCCACTCATAGTCGGATTGCTGGCACTGGGCGCTTCCACAGCTCTACT
CTGCGTAGGGACTCACCTTAGTCTCTGGATCATTGGCCGTCTCTTCCAGG
GAGCATCTGCAGCGGTTGTATGGACGGTTGGGGCCGCGTTGCTCGTTGAC
ACGGTTGGAAAAGAGGGCCTTGGGCAGGCGATGGGTTATATCGGCATGGG
TATGACCTTTGGAATCATGGGTGGGCCACTTCTAGGTGGCGTCATCTACG
CCCGTGGCGGATACTATGCCGTTTTTGCGCTGGCATTTGCTCTTGTTGGC
GTAGATATTGTTTTGCGGCTGGTCATGATCGAGAAGAAGCATGCCGTGAA
GTGGTTGCAGCAAGAAAAGAAACAGAGTCCGGATATTTCGCCGTCGGAAA
CCACTGAGAAATGCTCTGATGTGGAAGATGCTACTGATCGGTCGCCCGCT
GTTGCATCTGATAGTAAGTCGGAGGGCCCGGTTTCAGTTGACCAGCAGTC
TGCTGAATCCCCTGAACATGCAACTCCCAAGAAGAGTAGAAGCGCTGTCA
TTACTCTTCTCGCTTCAGAACGCATGATAGTCACCATCTGGGCTTACTTC
ATCGTCTCCGTGGTCCTGACCTCATTCGACAGCGTCCTTCCTCTCTTTGT
CGAGGACACCTTCGGTTGGGATCAGACAGGCCAGGGGCTCATTTTTGTGC
CCTTGTCCGTTCCTCATATTTCCGATCCGTTCTTCGGCTGGATCAACGAC
AAGTTTGTGAACGCAAGACGCTACATGGCGGCAGGAGCACTATTTTCAAC
CATTCCATTCATGGTGCTGCTCCGTCTTGTGACGCATGACTCCATGGGCC
AGAAGGTGTTGTTATGTGCATTGCTGGTCCTTATTGGCTTTTGCATAGCC
TCGCTGATGCCTCCTCTATTGGTTGAGGCGTCCTATATTGTGGAGGAAAA
GGAGGCACGGGACCCCAATATCTTTGGTAAGGGTGGTGCCATGGCCTTGT
CTTATGGAATCCTCAACTCGGCATATGCTGCTGGAACCATTGTTGGCCCC
TTTTTTGCGGGGTTTATCCGGCAAAGTGCGGGCTGGAAGACCATGACGTG
GGCTTTGGCCTTGCTGACTGGGGTATCCGGTGTGCCTATTTTGTTGTTCC
TGGGTGGGTTTCTGTTTAGGAAGAGGAGAAGTGAAACGGCTGCATCGGTT
GAGTGAATGACCTGGAATCTGCGTGGATTAGTACCAGGGCAGAATGACAC
CAAGCCGCCGGTCTTTCTAAAGTGGAGGTCATCTAATGCTTTTATTATCT
TCGTGGTGGTTTTCGCTGTCTTCACGGATGTTTTACTCTATGGGTTGATT
GTCCCTGTGGCTCCTACCGCTTTACATGAGAGGGTTGGGATGTCTGTTGA
TCAAGAACAATCATGGACGTCGATATTGTTAGCATTGTATGGCGCAGCGC
TGTTAGCAGCATCGCCCGTTGCGGGTTACATTGCCGACCGCTTTGAATCA
CGATGGTGGCCACTCATAGTCGGATTGCTGGCACTGGGCGCTTCCACAGC
TCTACTCTGCGTAGGGACTCACCTTAGTCTCTGGATCATTGGCCGTCTCT
TCCAGGGAGCATCTGCAGCGGTTGTATGGACGGTTGGGGCCGCGTTGCTC
GTTGACACGGTTGGAAAAGAGGGCCTTGGGCAGGCGATGGGTTATATCGG
CATGGGTATGACCTTTGGAATCATGGGTGGGCCACTTCTAGGTGGCGTCA
TCTACGCCCGTGGCGGATACTATGCCGTTTTTGCGCTGGCATTTGCTCTT
GTTGGCGTAGATATTGTTTTGCGGCTGGTCATGATCGAGAAGAAGCATGC
CGTGAAGTGGTTGCAGCAAGAAAAGAAACAGAGTCCGGATATTTCGCCGT
CGGAAACCACTGAGAAATGCTCTGATGTGGAAGATGCTACTGATCGGTCG
CCCGCTGTTGCATCTGATAGTAAGTCGGAGGGCCCGGTTTCAGTTGACCA
GCAGTCTGCTGAATCCCCTGAACATGCAACTCCCAAGAAGAGTAGAAGCG
CTGTCATTACTCTTCTCGCTTCAGAACGCATGATAGTCACCATCTGGGCT
TACTTCATCGTCTCCGTGGTCCTGACCTCATTCGACAGCGTCCTTCCTCT
CTTTGTCGAGGACACCTTCGGTTGGGATCAGACAGGCCAGGGGCTCATTT
TTGTGCCCTTGTCCGTTCCTCATATTTCCGATCCGTTCTTCGGCTGGATC
AACGACAAGTTTGTGAACGCAAGACGCTACATGGCGGCAGGAGCACTATT
TTCAACCATTCCATTCATGGTGCTGCTCCGTCTTGTGACGCATGACTCCA
TGGGCCAGAAGGTGTTGTTATGTGCATTGCTGGTCCTTATTGGCTTTTGC
ATAGCCTCGCTGATGCCTCCTCTATTGGTTGAGGCGTCCTATATTGTGGA
GGAAAAGGAGGCACGGGACCCCAATATCTTTGGTAAGGGTGGTGCCATGG
CCTTGTCTTATGGAATCCTCAACTCGGCATATGCTGCTGGAACCATTGTT
GGCCCCTTTTTTGCGGGGTTTATCCGGCAAAGTGCGGGCTGGAAGACCAT
GACGTGGGCTTTGGCCTTGCTGACTGGGGTATCCGGTGTGCCTATTTTGT
TGTTCCTGGGTGGGTTTCTGTTTAGGAAGAGGAGAAGTGAAACGGCTGCA
TCGGTTGAGTGAATGACCTGGAATCTGCGTGGATTAGTACCAGGGCAGAA
TGACACCAAGCCGCCGGTCTTTCTAAAGTGGAGGTCATCTAATGCTTTTA
TTATCTTCGTGGTGGTTTTCGCTGTCTTCACGGATGTTTTACTCTATGGG
TTGATTGTCCCTGTGGCTCCTACCGCTTTACATGAGAGGGTTGGGATGTC
TGTTGATCAAGAACAATCATGGACGTCGATATTGTTAGCATTGTATGGCG
CAGCGCTGTTAGCAGCATCGCCCGTTGCGGGTTACATTGCCGACCGCTTT
GAATCACGATGGTGGCCACTCATAGTCGGATTGCTGGCACTGGGCGCTTC
CACAGCTCTACTCTGCGTAGGGACTCACCTTAGTCTCTGGATCATTGGCC
GTCTCTTCCAGGGAGCATCTGCAGCGGTTGTATGGACGGTTGGGGCCGCG
TTGCTCGTTGACACGGTTGGAAAAGAGGGCCTTGGGCAGGCGATGGGTTA
TATCGGCATGGGTATGACCTTTGGAATCATGGGTGGGCCACTTCTAGGTG
GCGTCATCTACGCCCGTGGCGGATACTATGCCGTTTTTGCGCTGGCATTT
GCTCTTGTTGGCGTAGATATTGTTTTGCGGCTGGTCATGATCGAGAAGAA
GCATGCCGTGAAGTGGTTGCAGCAAGAAAAGAAACAGAGTCCGGATATTT
CGCCGTCGGAAACCACTGAGAAATGCTCTGATGTGGAAGATGCTACTGAT
CGGTCGCCCGCTGTTGCATCTGATAGTAAGTCGGAGGGCCCGGTTTCAGT
TGACCAGCAGTCTGCTGAATCCCCTGAACATGCAACTCCCAAGAAGAGTA
GAAGCGCTGTCATTACTCTTCTCGCTTCAGAACGCATGATAGTCACCATC
TGGGCTTACTTCATCGTCTCCGTGGTCCTGACCTCATTCGACAGCGTCCT
TCCTCTCTTTGTCGAGGACACCTTCGGTTGGGATCAGACAGGCCAGGGGC
TCATTTTTGTGCCCTTGTCCGTTCCTCATATTTCCGATCCGTTCTTCGGC
TGGATCAACGACAAGTTTGTGAACGCAAGACGCTACATGGCGGCAGGAGC
ACTATTTTCAACCATTCCATTCATGGTGCTGCTCCGTCTTGTGACGCATG
ACTCCATGGGCCAGAAGGTGTTGTTATGTGCATTGCTGGTCCTTATTGGC
TTTTGCATAGCCTCGCTGATGCCTCCTCTATTGGTTGAGGCGTCCTATAT
TGTGGAGGAAAAGGAGGCACGGGACCCCAATATCTTTGGTAAGGGTGGTG
CCATGGCCTTGTCTTATGGAATCCTCAACTCGGCATATGCTGCTGGAACC
ATTGTTGGCCCCTTTTTTGCGGGGTTTATCCGGCAAAGTGCGGGCTGGAA
GACCATGACGTGGGCTTTGGCCTTGCTGACTGGGGTATCCGGTGTGCCTA
TTTTGTTGTTCCTGGGTGGGTTTCTGTTTAGGAAGAGGAGAAGTGAAACG
GCTGCATCGGTTGAGTGAATGACCTGGAATCTGCGTGGATTAGTACCAGG
GCAGAATGACACCAAGCCGCCGGTCTTTCTAAAGTGGAGGTCATCTAATG
CTTTTATTATCTTCGTGGTGGTTTTCGCTGTCTTCACGGATGTTTTACTC
TATGGGTTGATTGTCCCTGTGGCTCCTACCGCTTTACATGAGAGGGTTGG
GATGTCTGTTGATCAAGAACAATCATGGACGTCGATATTGTTAGCATTGT
ATGGCGCAGCGCTGTTAGCAGCATCGCCCGTTGCGGGTTACATTGCCGAC
CGCTTTGAATCACGATGGTGGCCACTCATAGTCGGATTGCTGGCACTGGG
CGCTTCCACAGCTCTACTCTGCGTAGGGACTCACCTTAGTCTCTGGATCA
TTGGCCGTCTCTTCCAGGGAGCATCTGCAGCGGTTGTATGGACGGTTGGG
GCCGCGTTGCTCGTTGACACGGTTGGAAAAGAGGGCCTTGGGCAGGCGAT
GGGTTATATCGGCATGGGTATGACCTTTGGAATCATGGGTGGGCCACTTC
TAGGTGGCGTCATCTACGCCCGTGGCGGATACTATGCCGTTTTTGCGCTG
GCATTTGCTCTTGTTGGCGTAGATATTGTTTTGCGGCTGGTCATGATCGA
GAAGAAGCATGCCGTGAAGTGGTTGCAGCAAGAAAAGAAACAGAGTCCGG
ATATTTCGCCGTCGGAAACCACTGAGAAATGCTCTGATGTGGAAGATGCT
ACTGATCGGTCGCCCGCTGTTGCATCTGATAGTAAGTCGGAGGGCCCGGT
TTCAGTTGACCAGCAGTCTGCTGAATCCCCTGAACATGCAACTCCCAAGA
AGAGTAGAAGCGCTGTCATTACTCTTCTCGCTTCAGAACGCATGATAGTC
ACCATCTGGGCTTACTTCATCGTCTCCGTGGTCCTGACCTCATTCGACAG
CGTCCTTCCTCTCTTTGTCGAGGACACCTTCGGTTGGGATCAGACAGGCC
AGGGGCTCATTTTTGTGCCCTTGTCCGTTCCTCATATTTCCGATCCGTTC
TTCGGCTGGATCAACGACAAGTTTGTGAACGCAAGACGCTACATGGCGGC
AGGAGCACTATTTTCAACCATTCCATTCATGGTGCTGCTCCGTCTTGTGA
CGCATGACTCCATGGGCCAGAAGGTGTTGTTATGTGCATTGCTGGTCCTT
ATTGGCTTTTGCATAGCCTCGCTGATGCCTCCTCTATTGGTTGAGGCGTC
CTATATTGTGGAGGAAAAGGAGGCACGGGACCCCAATATCTTTGGTAAGG
GTGGTGCCATGGCCTTGTCTTATGGAATCCTCAACTCGGCATATGCTGCT
GGAACCATTGTTGGCCCCTTTTTTGCGGGGTTTATCCGGCAAAGTGCGGG
CTGGAAGACCATGACGTGGGCTTTGGCCTTGCTGACTGGGGTATCCGGTG
TGCCTATTTTGTTGTTCCTGGGTGGGTTTCTGTTTAGGAAGAGGAGAAGT
GAAACGGCTGCATCGGTTGAGTGAATGACCTGGAATCTGCGTGGATTAGT
ACCAGGGCAGAATGACACCAAGCCGCCGGTCTTTCTAAAGTGGAGGTCAT
CTAATGCTTTTATTATCTTCGTGGTGGTTTTCGCTGTCTTCACGGATGTT
TTACTCTATGGGTTGATTGTCCCTGTGGCTCCTACCGCTTTACATGAGAG
GGTTGGGATGTCTGTTGATCAAGAACAATCATGGACGTCGATATTGTTAG
CATTGTATGGCGCAGCGCTGTTAGCAGCATCGCCCGTTGCGGGTTACATT
GCCGACCGCTTTGAATCACGATGGTGGCCACTCATAGTCGGATTGCTGGC
ACTGGGCGCTTCCACAGCTCTACTCTGCGTAGGGACTCACCTTAGTCTCT
GGATCATTGGCCGTCTCTTCCAGGGAGCATCTGCAGCGGTTGTATGGACG
GTTGGGGCCGCGTTGCTCGTTGACACGGTTGGAAAAGAGGGCCTTGGGCA
GGCGATGGGTTATATCGGCATGGGTATGACCTTTGGAATCATGGGTGGGC
CACTTCTAGGTGGCGTCATCTACGCCCGTGGCGGATACTATGCCGTTTTT
GCGCTGGCATTTGCTCTTGTTGGCGTAGATATTGTTTTGCGGCTGGTCAT
GATCGAGAAGAAGCATGCCGTGAAGTGGTTGCAGCAAGAAAAGAAACAGA
GTCCGGATATTTCGCCGTCGGAAACCACTGAGAAATGCTCTGATGTGGAA
GATGCTACTGATCGGTCGCCCGCTGTTGCATCTGATAGTAAGTCGGAGGG
CCCGGTTTCAGTTGACCAGCAGTCTGCTGAATCCCCTGAACATGCAACTC
CCAAGAAGAGTAGAAGCGCTGTCATTACTCTTCTCGCTTCAGAACGCATG
ATAGTCACCATCTGGGCTTACTTCATCGTCTCCGTGGTCCTGACCTCATT
CGACAGCGTCCTTCCTCTCTTTGTCGAGGACACCTTCGGTTGGGATCAGA
CAGGCCAGGGGCTCATTTTTGTGCCCTTGTCCGTTCCTCATATTTCCGAT
CCGTTCTTCGGCTGGATCAACGACAAGTTTGTGAACGCAAGACGCTACAT
GGCGGCAGGAGCACTATTTTCAACCATTCCATTCATGGTGCTGCTCCGTC
TTGTGACGCATGACTCCATGGGCCAGAAGGTGTTGTTATGTGCATTGCTG
GTCCTTATTGGCTTTTGCATAGCCTCGCTGATGCCTCCTCTATTGGTTGA
GGCGTCCTATATTGTGGAGGAAAAGGAGGCACGGGACCCCAATATCTTTG
GTAAGGGTGGTGCCATGGCCTTGTCTTATGGAATCCTCAACTCGGCATAT
GCTGCTGGAACCATTGTTGGCCCCTTTTTTGCGGGGTTTATCCGGCAAAG
TGCGGGCTGGAAGACCATGACGTGGGCTTTGGCCTTGCTGACTGGGGTAT
CCGGTGTGCCTATTTTGTTGTTCCTGGGTGGGTTTCTGTTTAGGAAGAGG
AGAAGTGAAACGGCTGCATCGGTTGAGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002882-T1.utr5p1 | KJC3_002882-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002882-T1.utr3p1 | KJC3_002882-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | InterPro:IPR001958 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3831393..3833446 + |
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