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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3845993..3848156- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002888-T1 ID=KJC3_002888-T1|Name=KJC3_002888-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2164bp|location=Sequence derived from alignment at ch2:3845993..3848156- (Aspergillus niger KJC3)
ATGCGCCTCCTCCACCCCCTCATCCCAGCCTCCCTCCTCCTCACCCTCAC
CTCCGCGACCCTGCACACCTCCCAAACCAACACCACCATAACCCTGACCA
ACAACCGCCTCACAGCAAACTTCTCCAAATCCCAAGGCCGAATCACCGAC
CTCTACCTCGACAACCAAGACCTCCTAGGTCCCCAATCTGGCGACACCGG
CGTCGGCCCCTACCTCGACTGCTACTGCATCCCCTCCGGCTTCTACACGC
CGGGCTCCACCTCCCCAACCCTGCAACTCTTCACCGGCACCGACAAGTCC
GGAACCAGCTATGCAGGCGTTCTCATGGACGAGACCTACCCGCCGACGGG
CCAACATTTCCAACAATACTGGTTCCTGCGCGACGGCGAAACAGGGCTCC
ATACATTCAGCCGGTTAGCGTACTACAACGAGACGACGCCGTATTTGCGC
AATCTGCAGGAATTCCGCACCTTGTTTCGGCCCAATACGGAGCTTTGGAC
GCATTTGTCGTCGAGTGAGGTGCAGACGGCGCCGTTGCCGAGTAAGAAGG
CTGTGGAGGAGGAGGTGGTGGTGCAGGATGCGACGTGGACGTTCAATAAT
ACTCCGACTGATGAGTATTATGTGCAGTTTGCGGATTATTTTACTAAGTA
TACGTTTTCGAATGGTATGTTTTTTGTGTCTATTGTCAAGGGGATGGGGT
TGGCTGACTTGTGGTTTTGTTTACTAGCGTGGAGGGATAATTCCGTTCAT
GGCATGTATGCCGATGGGAGTACATCGAATGGGAGTACGTTTGGGGCTTG
GTTGGTTATGAATACTAAGGTATTTCGGATCTTGGAAGGTTTATCGGAGC
CGTGGCTAATGGTTTCTGTTTAGGATACTTACTATGGTGTATGTCACTGC
GTTCTCTCAATTGATTGGAGAAAATGCTGACCATTTGCCTTAGGGCCCCC
TGCACTCGGATCTCACCGTCGACGGCATCGTCTACAACTACCTGGTGTCT
AATCACCACGGCGAAGGCACTCCTAACATCACCTACGGCTTTGATCGCAC
TTTCGGCCCTCAATACTATCACTTCAACGGCGGAAAAGGCTCCACTGCGT
CTCTGCAAGAGCTGAAATCTGACGCGGAAACACTGGCAGATCCGAGCTGG
AACGTCGACTTCTACGACTCCATCGCCAAACATGTGGTCGGATACACACC
TTCCAGTCAACGCGGCAGCGTGCAAGGGAAGATCAAGCTACCCAAAGGTG
CCACGAGACCTATCGCAGTCCTGACCGTGGACGGGCAGTATTTCCAGGAC
AACTCGGTGAACTCATCATCATACCAGTATTGGGCTGAGATCGACGACTC
CGGACATTTCAGCGTGGACCATGTCAAAGAGGGCCCGTACCGACTTACTG
TATACGCCGACGGAATCTTTGGTGACTTCGTACGCGACGGCGTGCAAGTG
AAGGCCGGCAAGAAAACTACCATCCAAGAAACCTGGGAGGCTGAGTCCGC
AGGCACTGAGATCTGGAGACTAGGCACACCGGACAAGTCTTCCGGGGAGT
TTCGACATGGAGTTGCCAGGGACCCCACACACCCTCTTCACCCGCCAGAG
TACCTGATCTATTGGGGCGCATATGACTGGCAATCTGACTTCCCGGACGG
AATCAACTATACCATTGGTACCAGTGATCCAGCAACCGACCTGAACACGG
TCCACTGGTCTGTATTCGGGCCGACACCGAACGATCCGCGCGTCGAATAC
GATACCACGCACGACTGGACGATCAACTTCCCTTTGACTGAGGACGATCT
TGCAGAGCGGTCCAAGGCCACTCTCACAATTCAACTGGCGGGAGCGAAAG
CAGCATCTGGCAATACGGACGTATACAATGCATCGGAGCCATATGCCAAC
CTCGCGCTGGAGAGTTATATCAACGATCAGGCCGAGCCGTTGACCCTTCT
TATCGGGTTCAATCAGTCGAGCAGCTGTATTGTACGGTCGGCTGTGAGTT
GCTATCAGGTTCGCTCGCGCATGGAGTTCCCGGCGGACTGGCTGAAGGTC
GGCAACAATGTTTTGACCTTGCATCTCCCGTATAACGCGACGGATACGGA
GACCGCGATTTTGCCGGCGACCGTGTATGTGCAGTACGATGCGTTGAGGT
TGGAGGTTTCGTAG back to topCoding sequence (CDS) from alignment at ch2:3845993..3848156- >KJC3_002888-T1 ID=KJC3_002888-T1|Name=KJC3_002888-T1|organism=Aspergillus niger KJC3|type=CDS|length=7968bp|location=Sequence derived from alignment at ch2:3845993..3848156- (Aspergillus niger KJC3)
GGCCCCCTGCACTCGGATCTCACCGTCGACGGCATCGTCTACAACTACCT
GGTGTCTAATCACCACGGCGAAGGCACTCCTAACATCACCTACGGCTTTG
ATCGCACTTTCGGCCCTCAATACTATCACTTCAACGGCGGAAAAGGCTCC
ACTGCGTCTCTGCAAGAGCTGAAATCTGACGCGGAAACACTGGCAGATCC
GAGCTGGAACGTCGACTTCTACGACTCCATCGCCAAACATGTGGTCGGAT
ACACACCTTCCAGTCAACGCGGCAGCGTGCAAGGGAAGATCAAGCTACCC
AAAGGTGCCACGAGACCTATCGCAGTCCTGACCGTGGACGGGCAGTATTT
CCAGGACAACTCGGTGAACTCATCATCATACCAGTATTGGGCTGAGATCG
ACGACTCCGGACATTTCAGCGTGGACCATGTCAAAGAGGGCCCGTACCGA
CTTACTGTATACGCCGACGGAATCTTTGGTGACTTCGTACGCGACGGCGT
GCAAGTGAAGGCCGGCAAGAAAACTACCATCCAAGAAACCTGGGAGGCTG
AGTCCGCAGGCACTGAGATCTGGAGACTAGGCACACCGGACAAGTCTTCC
GGGGAGTTTCGACATGGAGTTGCCAGGGACCCCACACACCCTCTTCACCC
GCCAGAGTACCTGATCTATTGGGGCGCATATGACTGGCAATCTGACTTCC
CGGACGGAATCAACTATACCATTGGTACCAGTGATCCAGCAACCGACCTG
AACACGGTCCACTGGTCTGTATTCGGGCCGACACCGAACGATCCGCGCGT
CGAATACGATACCACGCACGACTGGACGATCAACTTCCCTTTGACTGAGG
ACGATCTTGCAGAGCGGTCCAAGGCCACTCTCACAATTCAACTGGCGGGA
GCGAAAGCAGCATCTGGCAATACGGACGTATACAATGCATCGGAGCCATA
TGCCAACCTCGCGCTGGAGAGTTATATCAACGATCAGGCCGAGCCGTTGA
CCCTTCTTATCGGGTTCAATCAGTCGAGCAGCTGTATTGTACGGTCGGCT
GTGAGTTGCTATCAGGTTCGCTCGCGCATGGAGTTCCCGGCGGACTGGCT
GAAGGTCGGCAACAATGTTTTGACCTTGCATCTCCCGTATAACGCGACGG
ATACGGAGACCGCGATTTTGCCGGCGACCGTGTATGTGCAGTACGATGCG
TTGAGGTTGGAGGTTTCGTAGGATACTTACTATGGTCGTGGAGGGATAAT
TCCGTTCATGGCATGTATGCCGATGGGAGTACATCGAATGGGAGTACGTT
TGGGGCTTGGTTGGTTATGAATACTAAGATGCGCCTCCTCCACCCCCTCA
TCCCAGCCTCCCTCCTCCTCACCCTCACCTCCGCGACCCTGCACACCTCC
CAAACCAACACCACCATAACCCTGACCAACAACCGCCTCACAGCAAACTT
CTCCAAATCCCAAGGCCGAATCACCGACCTCTACCTCGACAACCAAGACC
TCCTAGGTCCCCAATCTGGCGACACCGGCGTCGGCCCCTACCTCGACTGC
TACTGCATCCCCTCCGGCTTCTACACGCCGGGCTCCACCTCCCCAACCCT
GCAACTCTTCACCGGCACCGACAAGTCCGGAACCAGCTATGCAGGCGTTC
TCATGGACGAGACCTACCCGCCGACGGGCCAACATTTCCAACAATACTGG
TTCCTGCGCGACGGCGAAACAGGGCTCCATACATTCAGCCGGTTAGCGTA
CTACAACGAGACGACGCCGTATTTGCGCAATCTGCAGGAATTCCGCACCT
TGTTTCGGCCCAATACGGAGCTTTGGACGCATTTGTCGTCGAGTGAGGTG
CAGACGGCGCCGTTGCCGAGTAAGAAGGCTGTGGAGGAGGAGGTGGTGGT
GCAGGATGCGACGTGGACGTTCAATAATACTCCGACTGATGAGTATTATG
TGCAGTTTGCGGATTATTTTACTAAGTATACGTTTTCGAATGGGCCCCCT
GCACTCGGATCTCACCGTCGACGGCATCGTCTACAACTACCTGGTGTCTA
ATCACCACGGCGAAGGCACTCCTAACATCACCTACGGCTTTGATCGCACT
TTCGGCCCTCAATACTATCACTTCAACGGCGGAAAAGGCTCCACTGCGTC
TCTGCAAGAGCTGAAATCTGACGCGGAAACACTGGCAGATCCGAGCTGGA
ACGTCGACTTCTACGACTCCATCGCCAAACATGTGGTCGGATACACACCT
TCCAGTCAACGCGGCAGCGTGCAAGGGAAGATCAAGCTACCCAAAGGTGC
CACGAGACCTATCGCAGTCCTGACCGTGGACGGGCAGTATTTCCAGGACA
ACTCGGTGAACTCATCATCATACCAGTATTGGGCTGAGATCGACGACTCC
GGACATTTCAGCGTGGACCATGTCAAAGAGGGCCCGTACCGACTTACTGT
ATACGCCGACGGAATCTTTGGTGACTTCGTACGCGACGGCGTGCAAGTGA
AGGCCGGCAAGAAAACTACCATCCAAGAAACCTGGGAGGCTGAGTCCGCA
GGCACTGAGATCTGGAGACTAGGCACACCGGACAAGTCTTCCGGGGAGTT
TCGACATGGAGTTGCCAGGGACCCCACACACCCTCTTCACCCGCCAGAGT
ACCTGATCTATTGGGGCGCATATGACTGGCAATCTGACTTCCCGGACGGA
ATCAACTATACCATTGGTACCAGTGATCCAGCAACCGACCTGAACACGGT
CCACTGGTCTGTATTCGGGCCGACACCGAACGATCCGCGCGTCGAATACG
ATACCACGCACGACTGGACGATCAACTTCCCTTTGACTGAGGACGATCTT
GCAGAGCGGTCCAAGGCCACTCTCACAATTCAACTGGCGGGAGCGAAAGC
AGCATCTGGCAATACGGACGTATACAATGCATCGGAGCCATATGCCAACC
TCGCGCTGGAGAGTTATATCAACGATCAGGCCGAGCCGTTGACCCTTCTT
ATCGGGTTCAATCAGTCGAGCAGCTGTATTGTACGGTCGGCTGTGAGTTG
CTATCAGGTTCGCTCGCGCATGGAGTTCCCGGCGGACTGGCTGAAGGTCG
GCAACAATGTTTTGACCTTGCATCTCCCGTATAACGCGACGGATACGGAG
ACCGCGATTTTGCCGGCGACCGTGTATGTGCAGTACGATGCGTTGAGGTT
GGAGGTTTCGTAGGATACTTACTATGGTCGTGGAGGGATAATTCCGTTCA
TGGCATGTATGCCGATGGGAGTACATCGAATGGGAGTACGTTTGGGGCTT
GGTTGGTTATGAATACTAAGATGCGCCTCCTCCACCCCCTCATCCCAGCC
TCCCTCCTCCTCACCCTCACCTCCGCGACCCTGCACACCTCCCAAACCAA
CACCACCATAACCCTGACCAACAACCGCCTCACAGCAAACTTCTCCAAAT
CCCAAGGCCGAATCACCGACCTCTACCTCGACAACCAAGACCTCCTAGGT
CCCCAATCTGGCGACACCGGCGTCGGCCCCTACCTCGACTGCTACTGCAT
CCCCTCCGGCTTCTACACGCCGGGCTCCACCTCCCCAACCCTGCAACTCT
TCACCGGCACCGACAAGTCCGGAACCAGCTATGCAGGCGTTCTCATGGAC
GAGACCTACCCGCCGACGGGCCAACATTTCCAACAATACTGGTTCCTGCG
CGACGGCGAAACAGGGCTCCATACATTCAGCCGGTTAGCGTACTACAACG
AGACGACGCCGTATTTGCGCAATCTGCAGGAATTCCGCACCTTGTTTCGG
CCCAATACGGAGCTTTGGACGCATTTGTCGTCGAGTGAGGTGCAGACGGC
GCCGTTGCCGAGTAAGAAGGCTGTGGAGGAGGAGGTGGTGGTGCAGGATG
CGACGTGGACGTTCAATAATACTCCGACTGATGAGTATTATGTGCAGTTT
GCGGATTATTTTACTAAGTATACGTTTTCGAATGGGCCCCCTGCACTCGG
ATCTCACCGTCGACGGCATCGTCTACAACTACCTGGTGTCTAATCACCAC
GGCGAAGGCACTCCTAACATCACCTACGGCTTTGATCGCACTTTCGGCCC
TCAATACTATCACTTCAACGGCGGAAAAGGCTCCACTGCGTCTCTGCAAG
AGCTGAAATCTGACGCGGAAACACTGGCAGATCCGAGCTGGAACGTCGAC
TTCTACGACTCCATCGCCAAACATGTGGTCGGATACACACCTTCCAGTCA
ACGCGGCAGCGTGCAAGGGAAGATCAAGCTACCCAAAGGTGCCACGAGAC
CTATCGCAGTCCTGACCGTGGACGGGCAGTATTTCCAGGACAACTCGGTG
AACTCATCATCATACCAGTATTGGGCTGAGATCGACGACTCCGGACATTT
CAGCGTGGACCATGTCAAAGAGGGCCCGTACCGACTTACTGTATACGCCG
ACGGAATCTTTGGTGACTTCGTACGCGACGGCGTGCAAGTGAAGGCCGGC
AAGAAAACTACCATCCAAGAAACCTGGGAGGCTGAGTCCGCAGGCACTGA
GATCTGGAGACTAGGCACACCGGACAAGTCTTCCGGGGAGTTTCGACATG
GAGTTGCCAGGGACCCCACACACCCTCTTCACCCGCCAGAGTACCTGATC
TATTGGGGCGCATATGACTGGCAATCTGACTTCCCGGACGGAATCAACTA
TACCATTGGTACCAGTGATCCAGCAACCGACCTGAACACGGTCCACTGGT
CTGTATTCGGGCCGACACCGAACGATCCGCGCGTCGAATACGATACCACG
CACGACTGGACGATCAACTTCCCTTTGACTGAGGACGATCTTGCAGAGCG
GTCCAAGGCCACTCTCACAATTCAACTGGCGGGAGCGAAAGCAGCATCTG
GCAATACGGACGTATACAATGCATCGGAGCCATATGCCAACCTCGCGCTG
GAGAGTTATATCAACGATCAGGCCGAGCCGTTGACCCTTCTTATCGGGTT
CAATCAGTCGAGCAGCTGTATTGTACGGTCGGCTGTGAGTTGCTATCAGG
TTCGCTCGCGCATGGAGTTCCCGGCGGACTGGCTGAAGGTCGGCAACAAT
GTTTTGACCTTGCATCTCCCGTATAACGCGACGGATACGGAGACCGCGAT
TTTGCCGGCGACCGTGTATGTGCAGTACGATGCGTTGAGGTTGGAGGTTT
CGTAGGATACTTACTATGGTCGTGGAGGGATAATTCCGTTCATGGCATGT
ATGCCGATGGGAGTACATCGAATGGGAGTACGTTTGGGGCTTGGTTGGTT
ATGAATACTAAGATGCGCCTCCTCCACCCCCTCATCCCAGCCTCCCTCCT
CCTCACCCTCACCTCCGCGACCCTGCACACCTCCCAAACCAACACCACCA
TAACCCTGACCAACAACCGCCTCACAGCAAACTTCTCCAAATCCCAAGGC
CGAATCACCGACCTCTACCTCGACAACCAAGACCTCCTAGGTCCCCAATC
TGGCGACACCGGCGTCGGCCCCTACCTCGACTGCTACTGCATCCCCTCCG
GCTTCTACACGCCGGGCTCCACCTCCCCAACCCTGCAACTCTTCACCGGC
ACCGACAAGTCCGGAACCAGCTATGCAGGCGTTCTCATGGACGAGACCTA
CCCGCCGACGGGCCAACATTTCCAACAATACTGGTTCCTGCGCGACGGCG
AAACAGGGCTCCATACATTCAGCCGGTTAGCGTACTACAACGAGACGACG
CCGTATTTGCGCAATCTGCAGGAATTCCGCACCTTGTTTCGGCCCAATAC
GGAGCTTTGGACGCATTTGTCGTCGAGTGAGGTGCAGACGGCGCCGTTGC
CGAGTAAGAAGGCTGTGGAGGAGGAGGTGGTGGTGCAGGATGCGACGTGG
ACGTTCAATAATACTCCGACTGATGAGTATTATGTGCAGTTTGCGGATTA
TTTTACTAAGTATACGTTTTCGAATGGGCCCCCTGCACTCGGATCTCACC
GTCGACGGCATCGTCTACAACTACCTGGTGTCTAATCACCACGGCGAAGG
CACTCCTAACATCACCTACGGCTTTGATCGCACTTTCGGCCCTCAATACT
ATCACTTCAACGGCGGAAAAGGCTCCACTGCGTCTCTGCAAGAGCTGAAA
TCTGACGCGGAAACACTGGCAGATCCGAGCTGGAACGTCGACTTCTACGA
CTCCATCGCCAAACATGTGGTCGGATACACACCTTCCAGTCAACGCGGCA
GCGTGCAAGGGAAGATCAAGCTACCCAAAGGTGCCACGAGACCTATCGCA
GTCCTGACCGTGGACGGGCAGTATTTCCAGGACAACTCGGTGAACTCATC
ATCATACCAGTATTGGGCTGAGATCGACGACTCCGGACATTTCAGCGTGG
ACCATGTCAAAGAGGGCCCGTACCGACTTACTGTATACGCCGACGGAATC
TTTGGTGACTTCGTACGCGACGGCGTGCAAGTGAAGGCCGGCAAGAAAAC
TACCATCCAAGAAACCTGGGAGGCTGAGTCCGCAGGCACTGAGATCTGGA
GACTAGGCACACCGGACAAGTCTTCCGGGGAGTTTCGACATGGAGTTGCC
AGGGACCCCACACACCCTCTTCACCCGCCAGAGTACCTGATCTATTGGGG
CGCATATGACTGGCAATCTGACTTCCCGGACGGAATCAACTATACCATTG
GTACCAGTGATCCAGCAACCGACCTGAACACGGTCCACTGGTCTGTATTC
GGGCCGACACCGAACGATCCGCGCGTCGAATACGATACCACGCACGACTG
GACGATCAACTTCCCTTTGACTGAGGACGATCTTGCAGAGCGGTCCAAGG
CCACTCTCACAATTCAACTGGCGGGAGCGAAAGCAGCATCTGGCAATACG
GACGTATACAATGCATCGGAGCCATATGCCAACCTCGCGCTGGAGAGTTA
TATCAACGATCAGGCCGAGCCGTTGACCCTTCTTATCGGGTTCAATCAGT
CGAGCAGCTGTATTGTACGGTCGGCTGTGAGTTGCTATCAGGTTCGCTCG
CGCATGGAGTTCCCGGCGGACTGGCTGAAGGTCGGCAACAATGTTTTGAC
CTTGCATCTCCCGTATAACGCGACGGATACGGAGACCGCGATTTTGCCGG
CGACCGTGTATGTGCAGTACGATGCGTTGAGGTTGGAGGTTTCGTAGGAT
ACTTACTATGGTCGTGGAGGGATAATTCCGTTCATGGCATGTATGCCGAT
GGGAGTACATCGAATGGGAGTACGTTTGGGGCTTGGTTGGTTATGAATAC
TAAGATGCGCCTCCTCCACCCCCTCATCCCAGCCTCCCTCCTCCTCACCC
TCACCTCCGCGACCCTGCACACCTCCCAAACCAACACCACCATAACCCTG
ACCAACAACCGCCTCACAGCAAACTTCTCCAAATCCCAAGGCCGAATCAC
CGACCTCTACCTCGACAACCAAGACCTCCTAGGTCCCCAATCTGGCGACA
CCGGCGTCGGCCCCTACCTCGACTGCTACTGCATCCCCTCCGGCTTCTAC
ACGCCGGGCTCCACCTCCCCAACCCTGCAACTCTTCACCGGCACCGACAA
GTCCGGAACCAGCTATGCAGGCGTTCTCATGGACGAGACCTACCCGCCGA
CGGGCCAACATTTCCAACAATACTGGTTCCTGCGCGACGGCGAAACAGGG
CTCCATACATTCAGCCGGTTAGCGTACTACAACGAGACGACGCCGTATTT
GCGCAATCTGCAGGAATTCCGCACCTTGTTTCGGCCCAATACGGAGCTTT
GGACGCATTTGTCGTCGAGTGAGGTGCAGACGGCGCCGTTGCCGAGTAAG
AAGGCTGTGGAGGAGGAGGTGGTGGTGCAGGATGCGACGTGGACGTTCAA
TAATACTCCGACTGATGAGTATTATGTGCAGTTTGCGGATTATTTTACTA
AGTATACGTTTTCGAATG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0030246 | carbohydrate binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-19) |
| Note | CAZy:PL4_5 |
| Note | CAZy:PL4_2 |
| Note | CAZy:PL4_4 |
| Note | CAZy:PL4 |
| Note | CAZy:PL4_3 |
| DBxref | InterPro:IPR008979 |
| DBxref | InterPro:IPR013784 |
| DBxref | InterPro:IPR011013 |
| DBxref | InterPro:IPR029413 |
| DBxref | InterPro:IPR029411 |
| DBxref | PFAM:PF14686 |
| DBxref | PFAM:PF14683 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3845993..3848156 - |
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