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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3849565..3851218+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002889-T1 ID=KJC3_002889-T1|Name=KJC3_002889-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1654bp|location=Sequence derived from alignment at ch2:3849565..3851218+ (Aspergillus niger KJC3)
ATGACAGAAGATGTATCCTTGGGCACCGACATGGCTCGCTCTGACACACT
GAAGAAGAACGGTCATGAAGAGGTTCATCTTGAGAATGTATCTCCAACGC
CACCTGGCCAACAGCCAAACAGGAGCCTTTGGACAGATCCTTCTCCCACC
AACCCTCAAAACTGGCCTGTCTGGAAGAAGAATGCCCATATCCTGATGGT
GGCGTTTCATTCGATGGCCGCAACCTTCATGGCGGCCGGCATTATACCGG
CCTACGACATCATGGCTGAAAGGTACAACATAACGGTGCCACAAGCCAGT
TATCTCACCTCCGTTCAAGTACGTGATATCTATCGTTTACTCAGCGCTTC
CTCCACAGGGTCAATTCCTCCCCTTTAGTATTGGACGTACCGCCTGACTC
ACATTCGATCATCTGTACAGATCTTGCTCTTAGGAATTTGTCCCCTTTTC
TGGAGACCGATTGCCAACACCTACGGACGATACCATGTATTCCTGTTTTC
GGTCCTTGGAAGTATGGTCTGCAATATCGGTGGAGCTCGCTGTACTACAT
ACGGGACACAAATGGCCACTCGAGTACTCGCCGCAATCCTCATTTCTCCC
CCTATTGGAATAGGCAGTGGTGTGATCACGGAGCTGTGTGAGCCAGAGAA
ACGAGCGCAAAAGCTTGGGTGGTGGACACTCATGTTGACGCTTGGAACTC
CAGGTGGGCCATTTATTATGGGTTTTGTTACAAAGCGAATTGGGTTTGAG
TGGATCTATTGGATATTCGCCATGATGAACTTCGGGCAGTTCATCGCTTA
CCTGCTCTTGGGTGACGAAACGCTGTACATTCCGACCGACGGCGATACTC
ATGATGCAGGCGTGGCTAGATCTCGCTTCGTCCAGAAGTTCATCCCTCGC
CGGATCAACCCGCGTCCGCTTAAGCTTCGCGAATTCATCGAGCCACTTCT
CTTTACGAGGCTTCCTAGGGTGCTGATTCCTGCATGCGCTCATTCTATAG
TGTTCTGTTATGGAAACATTGCTTTGATTGTCGAAATGCCAATTGCTTTT
GGCGAGAAGTTCGACTTCGATTCGCAGCAAATTGGTCTGCAATTCATTGC
TATCATTATCGGGTGTGTCCTTGGTGAGCAGTTGAGTGGCCCTATGTCAG
ACCGGTTTCTGCAAGCCATGCATAGAAGAAGAGGATACCACCGGCCCGCA
GACAGGCTATGGCTCTCATACATTGGCTTTGCGACTGTCATTGCTGGCCT
TTTCGTATGGGGCTTTCAGCTACAGAAGGCTACCAGCTGGAACGTGACCC
CATGCGTCGGCGCCGCAATCGCCAGCTTTGGAAACCAAATCATAACGACA
ATCCTTATTTCGTTCGCTGTTGACAGCTATAAGGAAGCATCGACTAGTGT
CGGCGTCTGCATCAACGTGTTTCGACATGTGTATGGTTTTGTAAGTCAAA
GAGCAGACAGCGTTAGTGGTTCCTTGCTGATGGTTTTAGATCGGTCCATT
TTATTTCCCTGACATGTTCGAGACGTTGGGTCTGGGCGGTGCAGCTGGCG
TCATGTGTGCTATCATTGGGGTCTGCGCACTGCCCTCGATCATTGCCATA
CATTTCGTTGCTACGCGCGCAGATCAGAAGACGCAAGATGTTGTTACGGA
TTAA back to topCoding sequence (CDS) from alignment at ch2:3849565..3851218+ >KJC3_002889-T1 ID=KJC3_002889-T1|Name=KJC3_002889-T1|organism=Aspergillus niger KJC3|type=CDS|length=4509bp|location=Sequence derived from alignment at ch2:3849565..3851218+ (Aspergillus niger KJC3)
ATGACAGAAGATGTATCCTTGGGCACCGACATGGCTCGCTCTGACACACT
GAAGAAGAACGGTCATGAAGAGGTTCATCTTGAGAATGTATCTCCAACGC
CACCTGGCCAACAGCCAAACAGGAGCCTTTGGACAGATCCTTCTCCCACC
AACCCTCAAAACTGGCCTGTCTGGAAGAAGAATGCCCATATCCTGATGGT
GGCGTTTCATTCGATGGCCGCAACCTTCATGGCGGCCGGCATTATACCGG
CCTACGACATCATGGCTGAAAGGTACAACATAACGGTGCCACAAGCCAGT
TATCTCACCTCCGTTCAAATCTTGCTCTTAGGAATTTGTCCCCTTTTCTG
GAGACCGATTGCCAACACCTACGGACGATACCATGTATTCCTGTTTTCGG
TCCTTGGAAGTATGGTCTGCAATATCGGTGGAGCTCGCTGTACTACATAC
GGGACACAAATGGCCACTCGAGTACTCGCCGCAATCCTCATTTCTCCCCC
TATTGGAATAGGCAGTGGTGTGATCACGGAGCTGTGTGAGCCAGAGAAAC
GAGCGCAAAAGCTTGGGTGGTGGACACTCATGTTGACGCTTGGAACTCCA
GGTGGGCCATTTATTATGGGTTTTGTTACAAAGCGAATTGGGTTTGAGTG
GATCTATTGGATATTCGCCATGATGAACTTCGGGCAGTTCATCGCTTACC
TGCTCTTGGGTGACGAAACGCTGTACATTCCGACCGACGGCGATACTCAT
GATGCAGGCGTGGCTAGATCTCGCTTCGTCCAGAAGTTCATCCCTCGCCG
GATCAACCCGCGTCCGCTTAAGCTTCGCGAATTCATCGAGCCACTTCTCT
TTACGAGGCTTCCTAGGGTGCTGATTCCTGCATGCGCTCATTCTATAGTG
TTCTGTTATGGAAACATTGCTTTGATTGTCGAAATGCCAATTGCTTTTGG
CGAGAAGTTCGACTTCGATTCGCAGCAAATTGGTCTGCAATTCATTGCTA
TCATTATCGGGTGTGTCCTTGGTGAGCAGTTGAGTGGCCCTATGTCAGAC
CGGTTTCTGCAAGCCATGCATAGAAGAAGAGGATACCACCGGCCCGCAGA
CAGGCTATGGCTCTCATACATTGGCTTTGCGACTGTCATTGCTGGCCTTT
TCGTATGGGGCTTTCAGCTACAGAAGGCTACCAGCTGGAACGTGACCCCA
TGCGTCGGCGCCGCAATCGCCAGCTTTGGAAACCAAATCATAACGACAAT
CCTTATTTCGTTCGCTGTTGACAGCTATAAGGAAGCATCGACTAGTGTCG
GCGTCTGCATCAACGTGTTTCGACATGTGTATGGTTTTATCGGTCCATTT
TATTTCCCTGACATGTTCGAGACGTTGGGTCTGGGCGGTGCAGCTGGCGT
CATGTGTGCTATCATTGGGGTCTGCGCACTGCCCTCGATCATTGCCATAC
ATTTCGTTGCTACGCGCGCAGATCAGAAGACGCAAGATGTTGTTACGGAT
TAAATGACAGAAGATGTATCCTTGGGCACCGACATGGCTCGCTCTGACAC
ACTGAAGAAGAACGGTCATGAAGAGGTTCATCTTGAGAATGTATCTCCAA
CGCCACCTGGCCAACAGCCAAACAGGAGCCTTTGGACAGATCCTTCTCCC
ACCAACCCTCAAAACTGGCCTGTCTGGAAGAAGAATGCCCATATCCTGAT
GGTGGCGTTTCATTCGATGGCCGCAACCTTCATGGCGGCCGGCATTATAC
CGGCCTACGACATCATGGCTGAAAGGTACAACATAACGGTGCCACAAGCC
AGTTATCTCACCTCCGTTCAAATCTTGCTCTTAGGAATTTGTCCCCTTTT
CTGGAGACCGATTGCCAACACCTACGGACGATACCATGTATTCCTGTTTT
CGGTCCTTGGAAGTATGGTCTGCAATATCGGTGGAGCTCGCTGTACTACA
TACGGGACACAAATGGCCACTCGAGTACTCGCCGCAATCCTCATTTCTCC
CCCTATTGGAATAGGCAGTGGTGTGATCACGGAGCTGTGTGAGCCAGAGA
AACGAGCGCAAAAGCTTGGGTGGTGGACACTCATGTTGACGCTTGGAACT
CCAGGTGGGCCATTTATTATGGGTTTTGTTACAAAGCGAATTGGGTTTGA
GTGGATCTATTGGATATTCGCCATGATGAACTTCGGGCAGTTCATCGCTT
ACCTGCTCTTGGGTGACGAAACGCTGTACATTCCGACCGACGGCGATACT
CATGATGCAGGCGTGGCTAGATCTCGCTTCGTCCAGAAGTTCATCCCTCG
CCGGATCAACCCGCGTCCGCTTAAGCTTCGCGAATTCATCGAGCCACTTC
TCTTTACGAGGCTTCCTAGGGTGCTGATTCCTGCATGCGCTCATTCTATA
GTGTTCTGTTATGGAAACATTGCTTTGATTGTCGAAATGCCAATTGCTTT
TGGCGAGAAGTTCGACTTCGATTCGCAGCAAATTGGTCTGCAATTCATTG
CTATCATTATCGGGTGTGTCCTTGGTGAGCAGTTGAGTGGCCCTATGTCA
GACCGGTTTCTGCAAGCCATGCATAGAAGAAGAGGATACCACCGGCCCGC
AGACAGGCTATGGCTCTCATACATTGGCTTTGCGACTGTCATTGCTGGCC
TTTTCGTATGGGGCTTTCAGCTACAGAAGGCTACCAGCTGGAACGTGACC
CCATGCGTCGGCGCCGCAATCGCCAGCTTTGGAAACCAAATCATAACGAC
AATCCTTATTTCGTTCGCTGTTGACAGCTATAAGGAAGCATCGACTAGTG
TCGGCGTCTGCATCAACGTGTTTCGACATGTGTATGGTTTTATCGGTCCA
TTTTATTTCCCTGACATGTTCGAGACGTTGGGTCTGGGCGGTGCAGCTGG
CGTCATGTGTGCTATCATTGGGGTCTGCGCACTGCCCTCGATCATTGCCA
TACATTTCGTTGCTACGCGCGCAGATCAGAAGACGCAAGATGTTGTTACG
GATTAAATGACAGAAGATGTATCCTTGGGCACCGACATGGCTCGCTCTGA
CACACTGAAGAAGAACGGTCATGAAGAGGTTCATCTTGAGAATGTATCTC
CAACGCCACCTGGCCAACAGCCAAACAGGAGCCTTTGGACAGATCCTTCT
CCCACCAACCCTCAAAACTGGCCTGTCTGGAAGAAGAATGCCCATATCCT
GATGGTGGCGTTTCATTCGATGGCCGCAACCTTCATGGCGGCCGGCATTA
TACCGGCCTACGACATCATGGCTGAAAGGTACAACATAACGGTGCCACAA
GCCAGTTATCTCACCTCCGTTCAAATCTTGCTCTTAGGAATTTGTCCCCT
TTTCTGGAGACCGATTGCCAACACCTACGGACGATACCATGTATTCCTGT
TTTCGGTCCTTGGAAGTATGGTCTGCAATATCGGTGGAGCTCGCTGTACT
ACATACGGGACACAAATGGCCACTCGAGTACTCGCCGCAATCCTCATTTC
TCCCCCTATTGGAATAGGCAGTGGTGTGATCACGGAGCTGTGTGAGCCAG
AGAAACGAGCGCAAAAGCTTGGGTGGTGGACACTCATGTTGACGCTTGGA
ACTCCAGGTGGGCCATTTATTATGGGTTTTGTTACAAAGCGAATTGGGTT
TGAGTGGATCTATTGGATATTCGCCATGATGAACTTCGGGCAGTTCATCG
CTTACCTGCTCTTGGGTGACGAAACGCTGTACATTCCGACCGACGGCGAT
ACTCATGATGCAGGCGTGGCTAGATCTCGCTTCGTCCAGAAGTTCATCCC
TCGCCGGATCAACCCGCGTCCGCTTAAGCTTCGCGAATTCATCGAGCCAC
TTCTCTTTACGAGGCTTCCTAGGGTGCTGATTCCTGCATGCGCTCATTCT
ATAGTGTTCTGTTATGGAAACATTGCTTTGATTGTCGAAATGCCAATTGC
TTTTGGCGAGAAGTTCGACTTCGATTCGCAGCAAATTGGTCTGCAATTCA
TTGCTATCATTATCGGGTGTGTCCTTGGTGAGCAGTTGAGTGGCCCTATG
TCAGACCGGTTTCTGCAAGCCATGCATAGAAGAAGAGGATACCACCGGCC
CGCAGACAGGCTATGGCTCTCATACATTGGCTTTGCGACTGTCATTGCTG
GCCTTTTCGTATGGGGCTTTCAGCTACAGAAGGCTACCAGCTGGAACGTG
ACCCCATGCGTCGGCGCCGCAATCGCCAGCTTTGGAAACCAAATCATAAC
GACAATCCTTATTTCGTTCGCTGTTGACAGCTATAAGGAAGCATCGACTA
GTGTCGGCGTCTGCATCAACGTGTTTCGACATGTGTATGGTTTTATCGGT
CCATTTTATTTCCCTGACATGTTCGAGACGTTGGGTCTGGGCGGTGCAGC
TGGCGTCATGTGTGCTATCATTGGGGTCTGCGCACTGCCCTCGATCATTG
CCATACATTTCGTTGCTACGCGCGCAGATCAGAAGACGCAAGATGTTGTT
ACGGATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3849565..3851218 + |
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