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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3860317..3861437+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002893-T1 ID=KJC3_002893-T1|Name=KJC3_002893-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1121bp|location=Sequence derived from alignment at ch2:3860317..3861437+ (Aspergillus niger KJC3)
CCCAGACGGAGACTTTCTCATCCTCCGCCGCAAATATAAACCCACTACCT
CCGTTTGACCTTAACAGAATTCCAATCTCTCCGTTCTCCATCTATTAATT
AATTTCTCTTACTATCATCTATTCCGTAATTCAGAAATCCTTCATCCTTC
AGACACAACATCATGTCCAAACCAACCATTGCCTTCCTCGGTGCCACGGG
CGGCTGCATCAACGCCTGCCTCGCCCACACCCTGCAAACCGGCTACCACG
CCGTCGCACTAGCCCGCACGCCATCCAAGCTCACGGCCCTCCTTCGCACC
CAGAACATCGACCAAGAGACCCTGGACTCCCGACTCCGCATTGTGACAGG
CAATGCGACCGACCCGGAGGCCGTGAAAAATACGCTTCTTCTGCAGCCTG
GCTTTCCTACTGATCCTACGACATCAGCATCCTCACCAACACCAACCCTG
GTATCCCATATTATCTCAGGAATCGGCGCCACAGGCAACTTCCGTGGCTG
GTGCTTCGAATTCGACCAGCCGCATATCTGCGAAGAAGCCACACGGGCAC
TCCTCACTGCCTTGCGAAACATCTACGCCACGTATCCGGAGTTCATGCTG
CCTGCAAATGTGAAATCCAGACCGCTCCTCACCGTCCTCTCTGGCATGGG
CGTTGACCCGAGCCAGAAGCAGATGGATGTGCCGTTCTTGTTGCGCCGGG
TGTATCATGGGCTGCTGCATGTGCCACATGCGGATAAGTGGGTGATGGAG
GAGATGCTGGCGAAGAGGGAGGCGAGGGATTTGTTTCGGGGTGTAATCAC
GGTGAGGCCGGGGAGTTTGTTGACCGGGGATCATATGCTAGGTTCTGGAT
ATGGGTATGAGAAGGTCCGTGTGGGGACGGAGAGGGAGGAGCCTTCCGTG
GGATGGACTATTCCCAGGGCGGATGTGGGCGAGTGGGTGTTTCGTGAGGT
GGTGGTCATGGGGGGTGGGAGGTGGGTGGATGAGAAGGTGACATTGACTT
GTTGGTAGAGTTGTTTGTTTGTTTTGGGAGATATAGTGAGTTGTAGGCGT
TAAGTGAATGTGTTTTGGGTTACTGTTCATTGATGGTTCTTAGCAAGTAC
GAGAGGGTATTTTAATGTGGC back to topCoding sequence (CDS) from alignment at ch2:3860317..3861437+ >KJC3_002893-T1 ID=KJC3_002893-T1|Name=KJC3_002893-T1|organism=Aspergillus niger KJC3|type=CDS|length=846bp|location=Sequence derived from alignment at ch2:3860317..3861437+ (Aspergillus niger KJC3)
ATGTCCAAACCAACCATTGCCTTCCTCGGTGCCACGGGCGGCTGCATCAA
CGCCTGCCTCGCCCACACCCTGCAAACCGGCTACCACGCCGTCGCACTAG
CCCGCACGCCATCCAAGCTCACGGCCCTCCTTCGCACCCAGAACATCGAC
CAAGAGACCCTGGACTCCCGACTCCGCATTGTGACAGGCAATGCGACCGA
CCCGGAGGCCGTGAAAAATACGCTTCTTCTGCAGCCTGGCTTTCCTACTG
ATCCTACGACATCAGCATCCTCACCAACACCAACCCTGGTATCCCATATT
ATCTCAGGAATCGGCGCCACAGGCAACTTCCGTGGCTGGTGCTTCGAATT
CGACCAGCCGCATATCTGCGAAGAAGCCACACGGGCACTCCTCACTGCCT
TGCGAAACATCTACGCCACGTATCCGGAGTTCATGCTGCCTGCAAATGTG
AAATCCAGACCGCTCCTCACCGTCCTCTCTGGCATGGGCGTTGACCCGAG
CCAGAAGCAGATGGATGTGCCGTTCTTGTTGCGCCGGGTGTATCATGGGC
TGCTGCATGTGCCACATGCGGATAAGTGGGTGATGGAGGAGATGCTGGCG
AAGAGGGAGGCGAGGGATTTGTTTCGGGGTGTAATCACGGTGAGGCCGGG
GAGTTTGTTGACCGGGGATCATATGCTAGGTTCTGGATATGGGTATGAGA
AGGTCCGTGTGGGGACGGAGAGGGAGGAGCCTTCCGTGGGATGGACTATT
CCCAGGGCGGATGTGGGCGAGTGGGTGTTTCGTGAGGTGGTGGTCATGGG
GGGTGGGAGGTGGGTGGATGAGAAGGTGACATTGACTTGTTGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002893-T1.utr5p1 | KJC3_002893-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002893-T1.utr3p1 | KJC3_002893-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.17 |
| Note | antiSMASH:Cluster_2.18 |
| DBxref | InterPro:IPR036291 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3860317..3861437 + |
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