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KJC3_002902-T1, KJC3_002902-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002902-T1
Unique NameKJC3_002902-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3889682..3890961+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002902-T1 ID=KJC3_002902-T1|Name=KJC3_002902-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1280bp|location=Sequence derived from alignment at ch2:3889682..3890961+ (Aspergillus niger KJC3)
CTTTTTTGGGTTGGGACTTATTTAAGATCATATTCTCAGAGCTCGAAATC
CTTTATCTTCATAGAACTTTTTCAGATCGGCCCTATCCCAAAAATTCTTT
TGTATACCGATTGAACATTCGTTTCCAGACGTCTCTTGTCTTTCAAACCA
TGGCCTTCAACCGTATTGCTGTCTATGGTCACCGTGGATTCGTGGCCTCT
CGAGTTGTTCCTGTTCTAATTGCCTCGGGAGCTCCAATTACTGTTTTGCA
TCGCTCTACCTCGGATACCTCCAATCTCCCCGAACATGTCAGAAAGATTG
AAGTTGACGTTTTTGATGAAGACGCTTTGGTTAGAGCCTTGCAAGATATA
GACATTGTGCTGTCAGTCAGAGTTACTGCGCATCTGCACCTTTTCGATTG
TATGCTGATGGATTTTTCAGTTCTCTGGTTGGAGATGAGGGTACCGACAG
ACAGTATGGTTTTGTGAAGGCCATTCCTAGGACTAATGTCCGGCTTTTCG
TCCCTTCGGATTTCTGTCTGCGATATTGCGAGCAGGGAATGCGCATGCCC
TGTATGGTGGCAAAAGCGAAACTCGAAAAGGCTTCTAAGGATGCTGGGAT
CCCAACCACCGTTGTTCACGCAGGAAATTTCGCTGAATTCACCTTAAGTA
CACCGTGAGTCATCAACCGTGTACTCGGGATGCTTATATCCATAACTGAC
ACCTTCAAAAATTATAGGGCAGTGGGTGTTGATTTGCAGAATAATATATT
GGTCTACACCGGCAACTCTGCTAGCGAAAAAGTCACTATGTGGTGGGTAG
CATTTCACCCAGAGACTCCTTCTTCATCTCAATAATCACTTTGGTCTGAT
TACACTAACTCCTTGTTATAGCACCAAGGACTACGTAGCGGCTGCGTACG
TCGACATATTTACCACCAGACCTATACACACTATACAGAACCGGACCATC
ACCTTGTCAGAGCTTGCACCAACAGGCATGGAAATTGCTGCGATCATGAA
AAAGAAGAATGGCAGCGACCCCTCTATTGCGACACGAAGCATAGAGGAAG
TCGATCGAATGATTGAGGATTGTATCAGCAAGGAGAGTAATCTCGCCGTC
CCGTCCTATTGCCGCAAAATCTGGGGAACGGGACAAATGATGAAGATGCT
TCCCGATGATTTATGGGAAGTTAAGGACTACAGGAAAGCAACTTTAGAGG
ACCTCGTCCTCGGAGGAAAATTGGAAAGCTATAGAGCTCTACCCGATCAT
GTGTGGGAGTATCTTAGAAAGATGCTTTGA
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Coding sequence (CDS) from alignment at ch2:3889682..3890961+

>KJC3_002902-T1 ID=KJC3_002902-T1|Name=KJC3_002902-T1|organism=Aspergillus niger KJC3|type=CDS|length=3720bp|location=Sequence derived from alignment at ch2:3889682..3890961+ (Aspergillus niger KJC3)
ATGGCCTTCAACCGTATTGCTGTCTATGGTCACCGTGGATTCGTGGCCTC
TCGAGTTGTTCCTGTTCTAATTGCCTCGGGAGCTCCAATTACTGTTTTGC
ATCGCTCTACCTCGGATACCTCCAATCTCCCCGAACATGTCAGAAAGATT
GAAGTTGACGTTTTTGATGAAGACGCTTTGGTTAGAGCCTTGCAAGATAT
AGACATTGTGCTTTCTCTGGTTGGAGATGAGGGTACCGACAGACAGTATG
GTTTTGTGAAGGCCATTCCTAGGACTAATGTCCGGCTTTTCGTCCCTTCG
GATTTCTGTCTGCGATATTGCGAGCAGGGAATGCGCATGCCCTGTATGGT
GGCAAAAGCGAAACTCGAAAAGGCTTCTAAGGATGCTGGGATCCCAACCA
CCGTTGTTCACGCAGGAAATTTCGCTGAATTCACCTTAAGTACACCGGCA
GTGGGTGTTGATTTGCAGAATAATATATTGGTCTACACCGGCAACTCTGC
TAGCGAAAAAGTCACTATGTGCACCAAGGACTACGTAGCGGCTGCGTACG
TCGACATATTTACCACCAGACCTATACACACTATACAGAACCGGACCATC
ACCTTGTCAGAGCTTGCACCAACAGGCATGGAAATTGCTGCGATCATGAA
AAAGAAGAATGGCAGCGACCCCTCTATTGCGACACGAAGCATAGAGGAAG
TCGATCGAATGATTGAGGATTGTATCAGCAAGGAGAGTAATCTCGCCGTC
CCGTCCTATTGCCGCAAAATCTGGGGAACGGGACAAATGATGAAGATGCT
TCCCGATGATTTATGGGAAGTTAAGGACTACAGGAAAGCAACTTTAGAGG
ACCTCGTCCTCGGAGGAAAATTGGAAAGCTATAGAGCTCTACCCGATCAT
GTGTGGGAGTATCTTAGAAAGATGCTTTGAATGGCCTTCAACCGTATTGC
TGTCTATGGTCACCGTGGATTCGTGGCCTCTCGAGTTGTTCCTGTTCTAA
TTGCCTCGGGAGCTCCAATTACTGTTTTGCATCGCTCTACCTCGGATACC
TCCAATCTCCCCGAACATGTCAGAAAGATTGAAGTTGACGTTTTTGATGA
AGACGCTTTGGTTAGAGCCTTGCAAGATATAGACATTGTGCTTTCTCTGG
TTGGAGATGAGGGTACCGACAGACAGTATGGTTTTGTGAAGGCCATTCCT
AGGACTAATGTCCGGCTTTTCGTCCCTTCGGATTTCTGTCTGCGATATTG
CGAGCAGGGAATGCGCATGCCCTGTATGGTGGCAAAAGCGAAACTCGAAA
AGGCTTCTAAGGATGCTGGGATCCCAACCACCGTTGTTCACGCAGGAAAT
TTCGCTGAATTCACCTTAAGTACACCGGCAGTGGGTGTTGATTTGCAGAA
TAATATATTGGTCTACACCGGCAACTCTGCTAGCGAAAAAGTCACTATGT
GCACCAAGGACTACGTAGCGGCTGCGTACGTCGACATATTTACCACCAGA
CCTATACACACTATACAGAACCGGACCATCACCTTGTCAGAGCTTGCACC
AACAGGCATGGAAATTGCTGCGATCATGAAAAAGAAGAATGGCAGCGACC
CCTCTATTGCGACACGAAGCATAGAGGAAGTCGATCGAATGATTGAGGAT
TGTATCAGCAAGGAGAGTAATCTCGCCGTCCCGTCCTATTGCCGCAAAAT
CTGGGGAACGGGACAAATGATGAAGATGCTTCCCGATGATTTATGGGAAG
TTAAGGACTACAGGAAAGCAACTTTAGAGGACCTCGTCCTCGGAGGAAAA
TTGGAAAGCTATAGAGCTCTACCCGATCATGTGTGGGAGTATCTTAGAAA
GATGCTTTGAATGGCCTTCAACCGTATTGCTGTCTATGGTCACCGTGGAT
TCGTGGCCTCTCGAGTTGTTCCTGTTCTAATTGCCTCGGGAGCTCCAATT
ACTGTTTTGCATCGCTCTACCTCGGATACCTCCAATCTCCCCGAACATGT
CAGAAAGATTGAAGTTGACGTTTTTGATGAAGACGCTTTGGTTAGAGCCT
TGCAAGATATAGACATTGTGCTTTCTCTGGTTGGAGATGAGGGTACCGAC
AGACAGTATGGTTTTGTGAAGGCCATTCCTAGGACTAATGTCCGGCTTTT
CGTCCCTTCGGATTTCTGTCTGCGATATTGCGAGCAGGGAATGCGCATGC
CCTGTATGGTGGCAAAAGCGAAACTCGAAAAGGCTTCTAAGGATGCTGGG
ATCCCAACCACCGTTGTTCACGCAGGAAATTTCGCTGAATTCACCTTAAG
TACACCGGCAGTGGGTGTTGATTTGCAGAATAATATATTGGTCTACACCG
GCAACTCTGCTAGCGAAAAAGTCACTATGTGCACCAAGGACTACGTAGCG
GCTGCGTACGTCGACATATTTACCACCAGACCTATACACACTATACAGAA
CCGGACCATCACCTTGTCAGAGCTTGCACCAACAGGCATGGAAATTGCTG
CGATCATGAAAAAGAAGAATGGCAGCGACCCCTCTATTGCGACACGAAGC
ATAGAGGAAGTCGATCGAATGATTGAGGATTGTATCAGCAAGGAGAGTAA
TCTCGCCGTCCCGTCCTATTGCCGCAAAATCTGGGGAACGGGACAAATGA
TGAAGATGCTTCCCGATGATTTATGGGAAGTTAAGGACTACAGGAAAGCA
ACTTTAGAGGACCTCGTCCTCGGAGGAAAATTGGAAAGCTATAGAGCTCT
ACCCGATCATGTGTGGGAGTATCTTAGAAAGATGCTTTGAATGGCCTTCA
ACCGTATTGCTGTCTATGGTCACCGTGGATTCGTGGCCTCTCGAGTTGTT
CCTGTTCTAATTGCCTCGGGAGCTCCAATTACTGTTTTGCATCGCTCTAC
CTCGGATACCTCCAATCTCCCCGAACATGTCAGAAAGATTGAAGTTGACG
TTTTTGATGAAGACGCTTTGGTTAGAGCCTTGCAAGATATAGACATTGTG
CTTTCTCTGGTTGGAGATGAGGGTACCGACAGACAGTATGGTTTTGTGAA
GGCCATTCCTAGGACTAATGTCCGGCTTTTCGTCCCTTCGGATTTCTGTC
TGCGATATTGCGAGCAGGGAATGCGCATGCCCTGTATGGTGGCAAAAGCG
AAACTCGAAAAGGCTTCTAAGGATGCTGGGATCCCAACCACCGTTGTTCA
CGCAGGAAATTTCGCTGAATTCACCTTAAGTACACCGGCAGTGGGTGTTG
ATTTGCAGAATAATATATTGGTCTACACCGGCAACTCTGCTAGCGAAAAA
GTCACTATGTGCACCAAGGACTACGTAGCGGCTGCGTACGTCGACATATT
TACCACCAGACCTATACACACTATACAGAACCGGACCATCACCTTGTCAG
AGCTTGCACCAACAGGCATGGAAATTGCTGCGATCATGAAAAAGAAGAAT
GGCAGCGACCCCTCTATTGCGACACGAAGCATAGAGGAAGTCGATCGAAT
GATTGAGGATTGTATCAGCAAGGAGAGTAATCTCGCCGTCCCGTCCTATT
GCCGCAAAATCTGGGGAACGGGACAAATGATGAAGATGCTTCCCGATGAT
TTATGGGAAGTTAAGGACTACAGGAAAGCAACTTTAGAGGACCTCGTCCT
CGGAGGAAAATTGGAAAGCTATAGAGCTCTACCCGATCATGTGTGGGAGT
ATCTTAGAAAGATGCTTTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002902KJC3_002902Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002902-T1KJC3_002902-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002902-T1.utr5p1KJC3_002902-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002902-T1.exon1KJC3_002902-T1.exon1Aspergillus niger KJC3exon
KJC3_002902-T1.exon2KJC3_002902-T1.exon2Aspergillus niger KJC3exon
KJC3_002902-T1.exon3KJC3_002902-T1.exon3Aspergillus niger KJC3exon
KJC3_002902-T1.exon4KJC3_002902-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002902-T1.cdsKJC3_002902-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
NoteantiSMASH:Cluster_2.17
NoteantiSMASH:Cluster_2.18
NoteSMCOG1199:NmrA family protein
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3889682..3890961 +
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