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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3917026..3919182+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002914-T1 ID=KJC3_002914-T1|Name=KJC3_002914-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2157bp|location=Sequence derived from alignment at ch2:3917026..3919182+ (Aspergillus niger KJC3)
ATCTCATCTATTTGGTCGGCTGACAGAGCTTCTCCGCAACCCCGGCTTTG
GGGACCCAAAAAAAATCTGGGGAGCAAAGGATAAACTCATCCCCAAGTTG
TCTCTATATAAAAAGCCCATCCTGACAGCGCTCACTGCACAATGTCTGGC
TCTCTGCTTGTGCTCTCAATTTTGCTACCTGTCTGGCTTTCTCAACCCTC
TCTACACTATGACGGCTCCAATGTCGGCCACAGCTGCCGCCCGAGCTGAC
TGGCGTGCCATTGCAATCTGCCTGTTCATCACCATTGCAGCCTTCCAGTT
TGGCTTTGACTCATCCTATTACTCTGGTGGGTTCAGAGCCATACCCCTTT
CCCCAAAGAGCGACCAGCTTGAGTTTGCGAATACCCAACGCTTGGACATG
TTCTGATTGCAGTATGTTAACTCACATTCCCTCAGGTATACTGGTGATGG
AGCCCTTCATCAAAGCCTACGGACACTATGACAATGCAACGGGGGGCTAT
GTTCTCAGCTCTAGCATTCAGTCTCTCACGACCAGTATCATCAATATCGG
TGAGCTCGTCGGGGCCGTATCATCATACCTTGTCGATGACAGAATTGGTC
GCCGTGGTGGTCTGTTTGTGTCAAGCACATTTGTCGTCTTAGGGGTGATC
TTCCAAGTTTCTGCCGACAAGCTTGCTCTGTTGATTGTTGGACGGCTACT
CCTTGGTTAGTACTCATCGGAAGACGCCCGTACCACAGCTATCATAGTCA
CTAATCGGTTGTAACCGTTACTAACTGATGTGCAGGACATGCCGTGGGCC
TGATATCATGTCTAGTTCCGCTGTATGTAGCCGACTGTGCCCCGGCCAGG
TTCCGTGGAGCTCTGGTTTCTCTCTACCAATTCGATGTTGGCCTTGGACT
GCTACTGGGTGTGATCGTCGATAATGCGACCAAGAATCGGAACGATAGCG
GCGCTTATCGGATCCCCATGGCGGTGCAGCTGGTCTTCCCAGTCATACTG
GTGCCGGGGCTTATCTTGTTCGCCCCTGAATCACCTCGGTGGCTCTTGAA
GAAGGGGAAGACGGAGCAGGCCCGTGCAGCCCTCCGTCGCTTGCACGGAA
ATCGACCGGACGTGATTGAGAGCGAGGTTCTGTACATATCCGGGACTATT
GAAGAGGAACGCCGCGCGGAAGGTTCATGGCGGGAGCTACTCCACTGGCA
TCAGGACGGTCGCAAAGCATACCTGGGGATGGCACTCCAAGGTAAGATGA
AAAGCCCCTTCGCCCTCCATCGTCCTCCAATACTAAGTGTCTTCTTCCCA
TCAGCATGGCAACAAGCGTCTGGAATAAATTTTATAACCAGCTACGGAAT
CGTGTTTTTCTCTGCCATTGGGATGACCAATTCATTCCTGATCCAAATGG
GCCTATATCTGGTCCCCATGCCCGCGGTATGGCTGAATCAATATTGTGTC
GAGCGCTTTGGTCGTCGTCCCATGCTGCTGCTCTCGTGCGTCCTCGTCGC
CATGGTCCTTTTGATTGTCGGCGGGGCCGGAACAGCATCCCATAAAACTA
CGACTCTCGACCGATTGATCGTCGCCATGGTATACATCTACATGATCGTG
TATAATCTCTCCTTGGGACCAGCGGTTTGGGTGGTAACCTCGGAAATCTC
TGCCGGTCCAAACCGCAGCAAGTTGATGGCTACGTCGACCGGCGTCAATT
GGTTCTGCAGCTGGATGGTGACCTTTACCTTCCCCTATCTCTTCGATAGT
GATGCCGCCAATCTCAGTGCCCGAGTCGGCTTCATCTACGGTAGCTTGAT
GGTTGCGGCTGCCGTTTGGATTTACTTCCTACTTCCGGAGACCTCCGGAC
GCACGTTGGAGGAGATCCAGATCCTCTTCAAGAATGGCGTATCCGCCTGG
AATTTCAAATGTATGACAAACACCCCACCCCCTTTCTTGGTATTAGGCAA
CACATTGACTAATTCGTCTTCCTGCAGCTTATGAGATCCCCGAAATGCCA
GGTGGTTCTGTCATCGACGAGAAAAAGGAAGCACATGCTACTGAGGTAGA
GGAGGTATAGAGCGGGGGTGATGGACTTGACTCACTGTGATTGTATTCTA
AGTGCCGATGAGCGTATGTGTCAGACTATATATGAGGCCATTCAGTGATC
AGTTCAG back to topCoding sequence (CDS) from alignment at ch2:3917026..3919182+ >KJC3_002914-T1 ID=KJC3_002914-T1|Name=KJC3_002914-T1|organism=Aspergillus niger KJC3|type=CDS|length=7665bp|location=Sequence derived from alignment at ch2:3917026..3919182+ (Aspergillus niger KJC3)
ATGACGGCTCCAATGTCGGCCACAGCTGCCGCCCGAGCTGACTGGCGTGC
CATTGCAATCTGCCTGTTCATCACCATTGCAGCCTTCCAGTTTGGCTTTG
ACTCATCCTATTACTCTGGTATACTGGTGATGGAGCCCTTCATCAAAGCC
TACGGACACTATGACAATGCAACGGGGGGCTATGTTCTCAGCTCTAGCAT
TCAGTCTCTCACGACCAGTATCATCAATATCGGTGAGCTCGTCGGGGCCG
TATCATCATACCTTGTCGATGACAGAATTGGTCGCCGTGGTGGTCTGTTT
GTGTCAAGCACATTTGTCGTCTTAGGGGTGATCTTCCAAGTTTCTGCCGA
CAAGCTTGCTCTGTTGATTGTTGGACGGCTACTCCTTGGACATGCCGTGG
GCCTGATATCATGTCTAGTTCCGCTGTATGTAGCCGACTGTGCCCCGGCC
AGGTTCCGTGGAGCTCTGGTTTCTCTCTACCAATTCGATGTTGGCCTTGG
ACTGCTACTGGGTGTGATCGTCGATAATGCGACCAAGAATCGGAACGATA
GCGGCGCTTATCGGATCCCCATGGCGGTGCAGCTGGTCTTCCCAGTCATA
CTGGTGCCGGGGCTTATCTTGTTCGCCCCTGAATCACCTCGGTGGCTCTT
GAAGAAGGGGAAGACGGAGCAGGCCCGTGCAGCCCTCCGTCGCTTGCACG
GAAATCGACCGGACGTGATTGAGAGCGAGGTTCTGTACATATCCGGGACT
ATTGAAGAGGAACGCCGCGCGGAAGGTTCATGGCGGGAGCTACTCCACTG
GCATCAGGACGGTCGCAAAGCATACCTGGGGATGGCACTCCAAGCATGGC
AACAAGCGTCTGGAATAAATTTTATAACCAGCTACGGAATCGTGTTTTTC
TCTGCCATTGGGATGACCAATTCATTCCTGATCCAAATGGGCCTATATCT
GGTCCCCATGCCCGCGGTATGGCTGAATCAATATTGTGTCGAGCGCTTTG
GTCGTCGTCCCATGCTGCTGCTCTCGTGCGTCCTCGTCGCCATGGTCCTT
TTGATTGTCGGCGGGGCCGGAACAGCATCCCATAAAACTACGACTCTCGA
CCGATTGATCGTCGCCATGGTATACATCTACATGATCGTGTATAATCTCT
CCTTGGGACCAGCGGTTTGGGTGGTAACCTCGGAAATCTCTGCCGGTCCA
AACCGCAGCAAGTTGATGGCTACGTCGACCGGCGTCAATTGGTTCTGCAG
CTGGATGGTGACCTTTACCTTCCCCTATCTCTTCGATAGTGATGCCGCCA
ATCTCAGTGCCCGAGTCGGCTTCATCTACGGTAGCTTGATGGTTGCGGCT
GCCGTTTGGATTTACTTCCTACTTCCGGAGACCTCCGGACGCACGTTGGA
GGAGATCCAGATCCTCTTCAAGAATGGCGTATCCGCCTGGAATTTCAAAT
CTTATGAGATCCCCGAAATGCCAGGTGGTTCTGTCATCGACGAGAAAAAG
GAAGCACATGCTACTGAGGTAGAGGAGGTATAGATGACGGCTCCAATGTC
GGCCACAGCTGCCGCCCGAGCTGACTGGCGTGCCATTGCAATCTGCCTGT
TCATCACCATTGCAGCCTTCCAGTTTGGCTTTGACTCATCCTATTACTCT
GGTATACTGGTGATGGAGCCCTTCATCAAAGCCTACGGACACTATGACAA
TGCAACGGGGGGCTATGTTCTCAGCTCTAGCATTCAGTCTCTCACGACCA
GTATCATCAATATCGGTGAGCTCGTCGGGGCCGTATCATCATACCTTGTC
GATGACAGAATTGGTCGCCGTGGTGGTCTGTTTGTGTCAAGCACATTTGT
CGTCTTAGGGGTGATCTTCCAAGTTTCTGCCGACAAGCTTGCTCTGTTGA
TTGTTGGACGGCTACTCCTTGGACATGCCGTGGGCCTGATATCATGTCTA
GTTCCGCTGTATGTAGCCGACTGTGCCCCGGCCAGGTTCCGTGGAGCTCT
GGTTTCTCTCTACCAATTCGATGTTGGCCTTGGACTGCTACTGGGTGTGA
TCGTCGATAATGCGACCAAGAATCGGAACGATAGCGGCGCTTATCGGATC
CCCATGGCGGTGCAGCTGGTCTTCCCAGTCATACTGGTGCCGGGGCTTAT
CTTGTTCGCCCCTGAATCACCTCGGTGGCTCTTGAAGAAGGGGAAGACGG
AGCAGGCCCGTGCAGCCCTCCGTCGCTTGCACGGAAATCGACCGGACGTG
ATTGAGAGCGAGGTTCTGTACATATCCGGGACTATTGAAGAGGAACGCCG
CGCGGAAGGTTCATGGCGGGAGCTACTCCACTGGCATCAGGACGGTCGCA
AAGCATACCTGGGGATGGCACTCCAAGCATGGCAACAAGCGTCTGGAATA
AATTTTATAACCAGCTACGGAATCGTGTTTTTCTCTGCCATTGGGATGAC
CAATTCATTCCTGATCCAAATGGGCCTATATCTGGTCCCCATGCCCGCGG
TATGGCTGAATCAATATTGTGTCGAGCGCTTTGGTCGTCGTCCCATGCTG
CTGCTCTCGTGCGTCCTCGTCGCCATGGTCCTTTTGATTGTCGGCGGGGC
CGGAACAGCATCCCATAAAACTACGACTCTCGACCGATTGATCGTCGCCA
TGGTATACATCTACATGATCGTGTATAATCTCTCCTTGGGACCAGCGGTT
TGGGTGGTAACCTCGGAAATCTCTGCCGGTCCAAACCGCAGCAAGTTGAT
GGCTACGTCGACCGGCGTCAATTGGTTCTGCAGCTGGATGGTGACCTTTA
CCTTCCCCTATCTCTTCGATAGTGATGCCGCCAATCTCAGTGCCCGAGTC
GGCTTCATCTACGGTAGCTTGATGGTTGCGGCTGCCGTTTGGATTTACTT
CCTACTTCCGGAGACCTCCGGACGCACGTTGGAGGAGATCCAGATCCTCT
TCAAGAATGGCGTATCCGCCTGGAATTTCAAATCTTATGAGATCCCCGAA
ATGCCAGGTGGTTCTGTCATCGACGAGAAAAAGGAAGCACATGCTACTGA
GGTAGAGGAGGTATAGATGACGGCTCCAATGTCGGCCACAGCTGCCGCCC
GAGCTGACTGGCGTGCCATTGCAATCTGCCTGTTCATCACCATTGCAGCC
TTCCAGTTTGGCTTTGACTCATCCTATTACTCTGGTATACTGGTGATGGA
GCCCTTCATCAAAGCCTACGGACACTATGACAATGCAACGGGGGGCTATG
TTCTCAGCTCTAGCATTCAGTCTCTCACGACCAGTATCATCAATATCGGT
GAGCTCGTCGGGGCCGTATCATCATACCTTGTCGATGACAGAATTGGTCG
CCGTGGTGGTCTGTTTGTGTCAAGCACATTTGTCGTCTTAGGGGTGATCT
TCCAAGTTTCTGCCGACAAGCTTGCTCTGTTGATTGTTGGACGGCTACTC
CTTGGACATGCCGTGGGCCTGATATCATGTCTAGTTCCGCTGTATGTAGC
CGACTGTGCCCCGGCCAGGTTCCGTGGAGCTCTGGTTTCTCTCTACCAAT
TCGATGTTGGCCTTGGACTGCTACTGGGTGTGATCGTCGATAATGCGACC
AAGAATCGGAACGATAGCGGCGCTTATCGGATCCCCATGGCGGTGCAGCT
GGTCTTCCCAGTCATACTGGTGCCGGGGCTTATCTTGTTCGCCCCTGAAT
CACCTCGGTGGCTCTTGAAGAAGGGGAAGACGGAGCAGGCCCGTGCAGCC
CTCCGTCGCTTGCACGGAAATCGACCGGACGTGATTGAGAGCGAGGTTCT
GTACATATCCGGGACTATTGAAGAGGAACGCCGCGCGGAAGGTTCATGGC
GGGAGCTACTCCACTGGCATCAGGACGGTCGCAAAGCATACCTGGGGATG
GCACTCCAAGCATGGCAACAAGCGTCTGGAATAAATTTTATAACCAGCTA
CGGAATCGTGTTTTTCTCTGCCATTGGGATGACCAATTCATTCCTGATCC
AAATGGGCCTATATCTGGTCCCCATGCCCGCGGTATGGCTGAATCAATAT
TGTGTCGAGCGCTTTGGTCGTCGTCCCATGCTGCTGCTCTCGTGCGTCCT
CGTCGCCATGGTCCTTTTGATTGTCGGCGGGGCCGGAACAGCATCCCATA
AAACTACGACTCTCGACCGATTGATCGTCGCCATGGTATACATCTACATG
ATCGTGTATAATCTCTCCTTGGGACCAGCGGTTTGGGTGGTAACCTCGGA
AATCTCTGCCGGTCCAAACCGCAGCAAGTTGATGGCTACGTCGACCGGCG
TCAATTGGTTCTGCAGCTGGATGGTGACCTTTACCTTCCCCTATCTCTTC
GATAGTGATGCCGCCAATCTCAGTGCCCGAGTCGGCTTCATCTACGGTAG
CTTGATGGTTGCGGCTGCCGTTTGGATTTACTTCCTACTTCCGGAGACCT
CCGGACGCACGTTGGAGGAGATCCAGATCCTCTTCAAGAATGGCGTATCC
GCCTGGAATTTCAAATCTTATGAGATCCCCGAAATGCCAGGTGGTTCTGT
CATCGACGAGAAAAAGGAAGCACATGCTACTGAGGTAGAGGAGGTATAGA
TGACGGCTCCAATGTCGGCCACAGCTGCCGCCCGAGCTGACTGGCGTGCC
ATTGCAATCTGCCTGTTCATCACCATTGCAGCCTTCCAGTTTGGCTTTGA
CTCATCCTATTACTCTGGTATACTGGTGATGGAGCCCTTCATCAAAGCCT
ACGGACACTATGACAATGCAACGGGGGGCTATGTTCTCAGCTCTAGCATT
CAGTCTCTCACGACCAGTATCATCAATATCGGTGAGCTCGTCGGGGCCGT
ATCATCATACCTTGTCGATGACAGAATTGGTCGCCGTGGTGGTCTGTTTG
TGTCAAGCACATTTGTCGTCTTAGGGGTGATCTTCCAAGTTTCTGCCGAC
AAGCTTGCTCTGTTGATTGTTGGACGGCTACTCCTTGGACATGCCGTGGG
CCTGATATCATGTCTAGTTCCGCTGTATGTAGCCGACTGTGCCCCGGCCA
GGTTCCGTGGAGCTCTGGTTTCTCTCTACCAATTCGATGTTGGCCTTGGA
CTGCTACTGGGTGTGATCGTCGATAATGCGACCAAGAATCGGAACGATAG
CGGCGCTTATCGGATCCCCATGGCGGTGCAGCTGGTCTTCCCAGTCATAC
TGGTGCCGGGGCTTATCTTGTTCGCCCCTGAATCACCTCGGTGGCTCTTG
AAGAAGGGGAAGACGGAGCAGGCCCGTGCAGCCCTCCGTCGCTTGCACGG
AAATCGACCGGACGTGATTGAGAGCGAGGTTCTGTACATATCCGGGACTA
TTGAAGAGGAACGCCGCGCGGAAGGTTCATGGCGGGAGCTACTCCACTGG
CATCAGGACGGTCGCAAAGCATACCTGGGGATGGCACTCCAAGCATGGCA
ACAAGCGTCTGGAATAAATTTTATAACCAGCTACGGAATCGTGTTTTTCT
CTGCCATTGGGATGACCAATTCATTCCTGATCCAAATGGGCCTATATCTG
GTCCCCATGCCCGCGGTATGGCTGAATCAATATTGTGTCGAGCGCTTTGG
TCGTCGTCCCATGCTGCTGCTCTCGTGCGTCCTCGTCGCCATGGTCCTTT
TGATTGTCGGCGGGGCCGGAACAGCATCCCATAAAACTACGACTCTCGAC
CGATTGATCGTCGCCATGGTATACATCTACATGATCGTGTATAATCTCTC
CTTGGGACCAGCGGTTTGGGTGGTAACCTCGGAAATCTCTGCCGGTCCAA
ACCGCAGCAAGTTGATGGCTACGTCGACCGGCGTCAATTGGTTCTGCAGC
TGGATGGTGACCTTTACCTTCCCCTATCTCTTCGATAGTGATGCCGCCAA
TCTCAGTGCCCGAGTCGGCTTCATCTACGGTAGCTTGATGGTTGCGGCTG
CCGTTTGGATTTACTTCCTACTTCCGGAGACCTCCGGACGCACGTTGGAG
GAGATCCAGATCCTCTTCAAGAATGGCGTATCCGCCTGGAATTTCAAATC
TTATGAGATCCCCGAAATGCCAGGTGGTTCTGTCATCGACGAGAAAAAGG
AAGCACATGCTACTGAGGTAGAGGAGGTATAGATGACGGCTCCAATGTCG
GCCACAGCTGCCGCCCGAGCTGACTGGCGTGCCATTGCAATCTGCCTGTT
CATCACCATTGCAGCCTTCCAGTTTGGCTTTGACTCATCCTATTACTCTG
GTATACTGGTGATGGAGCCCTTCATCAAAGCCTACGGACACTATGACAAT
GCAACGGGGGGCTATGTTCTCAGCTCTAGCATTCAGTCTCTCACGACCAG
TATCATCAATATCGGTGAGCTCGTCGGGGCCGTATCATCATACCTTGTCG
ATGACAGAATTGGTCGCCGTGGTGGTCTGTTTGTGTCAAGCACATTTGTC
GTCTTAGGGGTGATCTTCCAAGTTTCTGCCGACAAGCTTGCTCTGTTGAT
TGTTGGACGGCTACTCCTTGGACATGCCGTGGGCCTGATATCATGTCTAG
TTCCGCTGTATGTAGCCGACTGTGCCCCGGCCAGGTTCCGTGGAGCTCTG
GTTTCTCTCTACCAATTCGATGTTGGCCTTGGACTGCTACTGGGTGTGAT
CGTCGATAATGCGACCAAGAATCGGAACGATAGCGGCGCTTATCGGATCC
CCATGGCGGTGCAGCTGGTCTTCCCAGTCATACTGGTGCCGGGGCTTATC
TTGTTCGCCCCTGAATCACCTCGGTGGCTCTTGAAGAAGGGGAAGACGGA
GCAGGCCCGTGCAGCCCTCCGTCGCTTGCACGGAAATCGACCGGACGTGA
TTGAGAGCGAGGTTCTGTACATATCCGGGACTATTGAAGAGGAACGCCGC
GCGGAAGGTTCATGGCGGGAGCTACTCCACTGGCATCAGGACGGTCGCAA
AGCATACCTGGGGATGGCACTCCAAGCATGGCAACAAGCGTCTGGAATAA
ATTTTATAACCAGCTACGGAATCGTGTTTTTCTCTGCCATTGGGATGACC
AATTCATTCCTGATCCAAATGGGCCTATATCTGGTCCCCATGCCCGCGGT
ATGGCTGAATCAATATTGTGTCGAGCGCTTTGGTCGTCGTCCCATGCTGC
TGCTCTCGTGCGTCCTCGTCGCCATGGTCCTTTTGATTGTCGGCGGGGCC
GGAACAGCATCCCATAAAACTACGACTCTCGACCGATTGATCGTCGCCAT
GGTATACATCTACATGATCGTGTATAATCTCTCCTTGGGACCAGCGGTTT
GGGTGGTAACCTCGGAAATCTCTGCCGGTCCAAACCGCAGCAAGTTGATG
GCTACGTCGACCGGCGTCAATTGGTTCTGCAGCTGGATGGTGACCTTTAC
CTTCCCCTATCTCTTCGATAGTGATGCCGCCAATCTCAGTGCCCGAGTCG
GCTTCATCTACGGTAGCTTGATGGTTGCGGCTGCCGTTTGGATTTACTTC
CTACTTCCGGAGACCTCCGGACGCACGTTGGAGGAGATCCAGATCCTCTT
CAAGAATGGCGTATCCGCCTGGAATTTCAAATCTTATGAGATCCCCGAAA
TGCCAGGTGGTTCTGTCATCGACGAGAAAAAGGAAGCACATGCTACTGAG
GTAGAGGAGGTATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002914-T1.utr5p1 | KJC3_002914-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002914-T1.utr3p1 | KJC3_002914-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3917026..3919182 + |
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