|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch2:3956889..3961060+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_002923-T2 ID=KJC3_002923-T2|Name=KJC3_002923-T2|organism=Aspergillus niger KJC3|type=mRNA|length=4172bp|location=Sequence derived from alignment at ch2:3956889..3961060+ (Aspergillus niger KJC3)
ATGACGACCAATATTCACTACATTATTCGGTTCCTCTCTGGATGCTAAGT
ATTACTTTCCCAAGTAAATGGAAAATTGGGATTAGCCGGAACGAGCCATC
AATCCTGAGCAGGAACGAGGTTTTGCAGCACCTCTACATTATCCCTCCGG
TCGTCCCGACTCAGGTCAATTACTGATAGAATGACTGACTAAAGACCAGC
AGGCTTCAGCTAGAGCAAGTAAGATATAGAACTCCAACCCAGACTTCTCA
TCACAGCATTCACGCAGTTACAGTGCTCTGGGGATGACCGCTCCCCAGAA
TATGCACCCAGGCAGCAACGGATCGATGCGGAGGTCCGCGCGCCCGGGAA
GGAGGAGCGGACATCCGCCGCCACCCGCCGATAGCATTATCGATGTCCCT
AACCGCGATGTATCTGTGACTTGATATTGCGCGGTAGCAGCTGGAAATAG
GTTAAGTTGCCAAAAAGTGCAGTTGGCTGATTCGTGACTCAGATACCCAT
ATTCTGGGACAGTATATCTAGTAGGGGATGTCAACGCATCAACCAGCAGA
CCAATCACGCTGATTTGCGCCTAACTGGAGAACAGGCAGAAGGATAGATA
TCCCCCAGCAAGAAACAGTCCAGTTTGCTAATCGCACAACGCGTTGGGGA
TAACAATAAAGATTCCCGCAAAACCTCCGTGGGATTTAACGGGCAGCGTT
GAACCCGTGATAGGTCGGTTCAGCCGATCAAGGCGCCAAGTGGGGAAAGC
TAATGGAGGTCCTGACTCGGGATCAGCCTCCCTTTTGTTCATGCAGGGGT
ATGATATAGCTACGGAACAAGTGTCATAATCTTTGCGGGGCTGGTGTGGG
TGACATTGAAATAGACATCAATAAAGAGTCCTAAGTGCTTATAATGTATT
GGCATCCAGTCCGCAACAATTGCTCTTTCTGCCTCAGATATTTGCAGACA
GCGGCTATGCTCTGAAAAAATGGTAGTCGGCCACGCCTGAATCACCGAAC
CCTCCTTAGCGCCGAGACGTTCGACTAGCCGACCAGACAGATTGCCAGGA
TGTTCATGAAGTCCCAGAAGCTAATGCAAGGTCGCTGTGCCACCTTAGTG
TTCGGTACCAAAGAACGTGGGCGTTGAGGCTGCATGGACGATGTTGCTCA
AGGCAGCCTCCATTCTTAACTCAGATCTCCCTGTCGCAACAGAAACAAGA
CCTTGCTTTCTACAGAATTCCTCGACGCCCTACTACGGGAGTTCATCAAA
GCTACTACATCATGTCTACCACTCCCGAGGAAGAGGCGTTGCGTCAGCTG
CAACGAGAACAGTCCAAGCTACTGGACGGCATCGACGAGTTACGAACGAT
TGGCGTCGGCAGCCTCGTGGAACTTCCTCAGCTGGTGGTCTGCGGTGCCC
AGTCAAGTGGGAAGAGTTCCGTCCTTGAAGCTATCTCCCGAGTGAGATTT
CCAGCGAAGGGCAACGTCTGTACGAGATTCGCGACCGAAGTCATCCTGCG
CCGGAGTCCAACACCCAAGATCAAGATTTCCATCGAACCGGGGCCGTCGC
GTAAGGACGCCAGAGAACGAGCGATCCTTCAGGCATTTGCGCAGGAGCTG
TCCCCACACGATAACGATCTGCCGGCTGTCATTGATAAAGCAAAAGACCA
CATGGGGGTGAATGAAACAGCCCATCCTGGATTCAGCGATGATGTTCTCA
AGGTCGAGATTCTAGGACCCGATAAGCCAGAATTGACCTTGGTGGATCTG
CCCGGCCTCTACTACTCCGTGAGCCAGGATCAAGGCCTGCAAGGAATCAA
GGTTGTCCGAACCTTGACAGAGAAGTATATGAAGAATGCAAGAAGCATCA
TCCTTGCGGTCATCAGCGCAAAAACCGACTACCACCTCCAGGAGGTTCTC
AACATCGCCGAACGTTTTGATCCGAGACGCGAGCGTACGCTTGGAATTAT
CACTCAGCCGGATACGCTGGAGCCAAATTCAGAGGAGGAGGGGACGTACC
TGCAGTTTATCTCTAACCAGAAGATTCGGTTGCAGCTCGGCTGGCACGTC
TTGCGCAATCGCTCCTTTGAGACACGGGATATACCGGACGACGCCCGCGA
TGAGAGAGAGAAGGACTTCTTCAGTCAAGGCCGATGGTCATCTTTGTCCA
GGGATAGTGTCGGAATCGAGAGCCTACGACGACGTCTTAGCAACATCTTA
TTTATTCAAATCCGTCGTAATCTCCCTGGGCTAATAGCCGACATTAAAGG
GAAGGCTTCCGACCGGGAGAAGGAGCTCTCGAAGTTGGGTTCCCCACGTG
CCACCCGGCAACAGCAACGGGGATATCTGCTCAACATCAGCAGCAGCTTT
GAGCGCATCACAGGGCAAGCGTTGCACGGTCTATATGCGGACGGGTTCTT
TGGTGCGTTCGAAACTATAAGTGATAACCACGATTTCCGGCGACTCAGGG
CCGTCATCAGGCAATTGAATGAGTATTTCGCCGACGCCATGGCCGCTCGA
GGGTCTCGTCGAATAATCGTGGATCGCCTTCCGGGGTTCGTCCAGGATTC
GATGCAACATGACTTGAAAAACCCTTACTTACCAGGAAGGCTTCCACATT
ATGTACTTCGGAAGAACCTGGAAGAGGAGGTCGCCGAACAGGCTCGGAAG
AACAGAGGGATTGAGCTGCCAGGCAGCGCCAATCAGCTCCTCGTGGGTAG
CCTGTTTCGCGATCAGTCCCTTCCATGGGAAGGCCTCGCAAGAGAGCATC
TCATGAAGGCCTGGGAATCAGTGCGGTATTTTGCGTTACTTGTTATGCAA
CACACAACCGATGATCATACCTTCTCCTTGCTGGCTGGATCCATTATTGA
GCCTGCGCTGGACAGATTGAGGCAAAATTTGCTGGACAAGCTCGATGAGC
TGACGGCATACACGAAACGGGGCCACCCATTGCCCGTGGGCAAGAGCTTC
CTCACGCAGATACAGAAGGCGCGAAGCGAACGTCAGGTGTCTTCGTTGAA
GACAAAACTCAAGTCCACCCATTTTCACAAGCCTGACGGGGAAGCCCTAT
TCTCGATGAAAGCAATCGAAGAGGCAACTTCCAGCTTGGAACTGTCCCGT
GATGAATATGCGGCGGCCGAAATCATCGACCAAATGCAAGCGTATTACGA
TGTAAGAACGAAAGAGCCTAATATCCAGCTCATAAGGGCAAAGCGACGTG
TTCTAATTGACCGTTCACAGACTGCCATCGTGACCTTCGTCGACAACGTT
GCAACCCTGGGCATTGAAAACTGTCTTCTTGACCCTTTGCAGCGGATCCT
GACTAGCCAGGTGATTAACAATATGGATGATGATCAGGTGCGAGAATTAG
CCTCTGAGCCCTCCTTCATCAGCGACGAGAGAGGCCGTCTGGCCAGTGAG
GTCGAAAAACTGCAGGCTGGTCTCCGCACTCTCAAGACATTCAACATCCA
AAAGCCTTCAATGAGTGGGCCGCCCTCAATTGAAAAGCTGGAGAAACCAT
CAACCAGCATTCTGGACAATCCTATGCCACTCACAGGGTTAAAATCGACG
GCCCAGCCGTCCTTCTTTTCAAGTCTGCCTGAAGCGAAGACTTATAAATC
ACCGGCTACGAAGCCTTTTGACGGAGCTGTAACCCCGGGCCTCTTTAATT
TTACAAGTAGGACATTATGATCCCAGCAGAGGACCTAGCTAATTTGTCCA
GAAACCCCGCAAACACCGTCTTCACAGGGCCTCGAGAAACCCATCTTACT
GAGTGCGATAAACCCGTTAAAGCCTATTTTGACAAGCAAGTCCGACTTCG
GGGCAAAGACACCTGGAGTAGAACTTCCCCCCAATGTTGAGGCGCCTAAA
GAGGGCGGGAAAAAAGCCTAAATACTGCCAACAGTTCAAACCAGTCTGTT
CAATGGAATCTTAAGCCGAGATAGTAGCCATCAGCAATGTATGCTGAGTG
AGCTTGACAAGTGAAGACCTTGCTTTTGATGACTTTAAATGTCACCAACA
CCATCATTCTTGATTCTCAGAAGGGCTATTGGATCGCTGGCCATGTGACG
CATCTTTATTGTCACGGGCTGTCATTAATAATATTCATCGCCTTGTTCTT
TCCGGCTAAAGGAAGTTGTTAATGAAATTAGAGGGATGAAGCAATCTCCA
GTGAAATTTAACAATGTATCCC back to topCoding sequence (CDS) from alignment at ch2:3956889..3961060+ >KJC3_002923-T2 ID=KJC3_002923-T2|Name=KJC3_002923-T2|organism=Aspergillus niger KJC3|type=CDS|length=4680bp|location=Sequence derived from alignment at ch2:3956889..3961060+ (Aspergillus niger KJC3)
ATGTCTACCACTCCCGAGGAAGAGGCGTTGCGTCAGCTGCAACGAGAACA
GTCCAAGCTACTGGACGGCATCGACGAGTTACGAACGATTGGCGTCGGCA
GCCTCGTGGAACTTCCTCAGCTGGTGGTCTGCGGTGCCCAGTCAAGTGGG
AAGAGTTCCGTCCTTGAAGCTATCTCCCGAGTGAGATTTCCAGCGAAGGG
CAACGTCTGTACGAGATTCGCGACCGAAGTCATCCTGCGCCGGAGTCCAA
CACCCAAGATCAAGATTTCCATCGAACCGGGGCCGTCGCGTAAGGACGCC
AGAGAACGAGCGATCCTTCAGGCATTTGCGCAGGAGCTGTCCCCACACGA
TAACGATCTGCCGGCTGTCATTGATAAAGCAAAAGACCACATGGGGGTGA
ATGAAACAGCCCATCCTGGATTCAGCGATGATGTTCTCAAGGTCGAGATT
CTAGGACCCGATAAGCCAGAATTGACCTTGGTGGATCTGCCCGGCCTCTA
CTACTCCGTGAGCCAGGATCAAGGCCTGCAAGGAATCAAGGTTGTCCGAA
CCTTGACAGAGAAGTATATGAAGAATGCAAGAAGCATCATCCTTGCGGTC
ATCAGCGCAAAAACCGACTACCACCTCCAGGAGGTTCTCAACATCGCCGA
ACGTTTTGATCCGAGACGCGAGCGTACGCTTGGAATTATCACTCAGCCGG
ATACGCTGGAGCCAAATTCAGAGGAGGAGGGGACGTACCTGCAGTTTATC
TCTAACCAGAAGATTCGGTTGCAGCTCGGCTGGCACGTCTTGCGCAATCG
CTCCTTTGAGACACGGGATATACCGGACGACGCCCGCGATGAGAGAGAGA
AGGACTTCTTCAGTCAAGGCCGATGGTCATCTTTGTCCAGGGATAGTGTC
GGAATCGAGAGCCTACGACGACGTCTTAGCAACATCTTATTTATTCAAAT
CCGTCGTAATCTCCCTGGGCTAATAGCCGACATTAAAGGGAAGGCTTCCG
ACCGGGAGAAGGAGCTCTCGAAGTTGGGTTCCCCACGTGCCACCCGGCAA
CAGCAACGGGGATATCTGCTCAACATCAGCAGCAGCTTTGAGCGCATCAC
AGGGCAAGCGTTGCACGGTCTATATGCGGACGGGTTCTTTGGTGCGTTCG
AAACTATAAGTGATAACCACGATTTCCGGCGACTCAGGGCCGTCATCAGG
CAATTGAATGAGTATTTCGCCGACGCCATGGCCGCTCGAGGGTCTCGTCG
AATAATCGTGGATCGCCTTCCGGGGTTCGTCCAGGATTCGATGCAACATG
ACTTGAAAAACCCTTACTTACCAGGAAGGCTTCCACATTATGTACTTCGG
AAGAACCTGGAAGAGGAGGTCGCCGAACAGGCTCGGAAGAACAGAGGGAT
TGAGCTGCCAGGCAGCGCCAATCAGCTCCTCGTGGGTAGCCTGTTTCGCG
ATCAGTCCCTTCCATGGGAAGGCCTCGCAAGAGAGCATCTCATGAAGGCC
TGGGAATCAGTGCGGTATTTTGCGTTACTTGTTATGCAACACACAACCGA
TGATCATACCTTCTCCTTGCTGGCTGGATCCATTATTGAGCCTGCGCTGG
ACAGATTGAGGCAAAATTTGCTGGACAAGCTCGATGAGCTGACGGCATAC
ACGAAACGGGGCCACCCATTGCCCGTGGGCAAGAGCTTCCTCACGCAGAT
ACAGAAGGCGCGAAGCGAACGTCAGGTGTCTTCGTTGAAGACAAAACTCA
AGTCCACCCATTTTCACAAGCCTGACGGGGAAGCCCTATTCTCGATGAAA
GCAATCGAAGAGGCAACTTCCAGCTTGGAACTGTCCCGTGATGAATATGC
GGCGGCCGAAATCATCGACCAAATGCAAGCGTATTACGATACTGCCATCG
TGACCTTCGTCGACAACGTTGCAACCCTGGGCATTGAAAACTGTCTTCTT
GACCCTTTGCAGCGGATCCTGACTAGCCAGGTGATTAACAATATGGATGA
TGATCAGGTGCGAGAATTAGCCTCTGAGCCCTCCTTCATCAGCGACGAGA
GAGGCCGTCTGGCCAGTGAGGTCGAAAAACTGCAGGCTGGTCTCCGCACT
CTCAAGACATTCAACATCCAAAAGCCTTCAATGAGTGGGCCGCCCTCAAT
TGAAAAGCTGGAGAAACCATCAACCAGCATTCTGGACAATCCTATGCCAC
TCACAGGGTTAAAATCGACGGCCCAGCCGTCCTTCTTTTCAAGTCTGCCT
GAAGCGAAGACTTATAAATCACCGGCTACGAAGCCTTTTGACGGAGCTGT
AACCCCGGGCCTCTTTAATTTTACAAGTAGGACATTATGAATGTCTACCA
CTCCCGAGGAAGAGGCGTTGCGTCAGCTGCAACGAGAACAGTCCAAGCTA
CTGGACGGCATCGACGAGTTACGAACGATTGGCGTCGGCAGCCTCGTGGA
ACTTCCTCAGCTGGTGGTCTGCGGTGCCCAGTCAAGTGGGAAGAGTTCCG
TCCTTGAAGCTATCTCCCGAGTGAGATTTCCAGCGAAGGGCAACGTCTGT
ACGAGATTCGCGACCGAAGTCATCCTGCGCCGGAGTCCAACACCCAAGAT
CAAGATTTCCATCGAACCGGGGCCGTCGCGTAAGGACGCCAGAGAACGAG
CGATCCTTCAGGCATTTGCGCAGGAGCTGTCCCCACACGATAACGATCTG
CCGGCTGTCATTGATAAAGCAAAAGACCACATGGGGGTGAATGAAACAGC
CCATCCTGGATTCAGCGATGATGTTCTCAAGGTCGAGATTCTAGGACCCG
ATAAGCCAGAATTGACCTTGGTGGATCTGCCCGGCCTCTACTACTCCGTG
AGCCAGGATCAAGGCCTGCAAGGAATCAAGGTTGTCCGAACCTTGACAGA
GAAGTATATGAAGAATGCAAGAAGCATCATCCTTGCGGTCATCAGCGCAA
AAACCGACTACCACCTCCAGGAGGTTCTCAACATCGCCGAACGTTTTGAT
CCGAGACGCGAGCGTACGCTTGGAATTATCACTCAGCCGGATACGCTGGA
GCCAAATTCAGAGGAGGAGGGGACGTACCTGCAGTTTATCTCTAACCAGA
AGATTCGGTTGCAGCTCGGCTGGCACGTCTTGCGCAATCGCTCCTTTGAG
ACACGGGATATACCGGACGACGCCCGCGATGAGAGAGAGAAGGACTTCTT
CAGTCAAGGCCGATGGTCATCTTTGTCCAGGGATAGTGTCGGAATCGAGA
GCCTACGACGACGTCTTAGCAACATCTTATTTATTCAAATCCGTCGTAAT
CTCCCTGGGCTAATAGCCGACATTAAAGGGAAGGCTTCCGACCGGGAGAA
GGAGCTCTCGAAGTTGGGTTCCCCACGTGCCACCCGGCAACAGCAACGGG
GATATCTGCTCAACATCAGCAGCAGCTTTGAGCGCATCACAGGGCAAGCG
TTGCACGGTCTATATGCGGACGGGTTCTTTGGTGCGTTCGAAACTATAAG
TGATAACCACGATTTCCGGCGACTCAGGGCCGTCATCAGGCAATTGAATG
AGTATTTCGCCGACGCCATGGCCGCTCGAGGGTCTCGTCGAATAATCGTG
GATCGCCTTCCGGGGTTCGTCCAGGATTCGATGCAACATGACTTGAAAAA
CCCTTACTTACCAGGAAGGCTTCCACATTATGTACTTCGGAAGAACCTGG
AAGAGGAGGTCGCCGAACAGGCTCGGAAGAACAGAGGGATTGAGCTGCCA
GGCAGCGCCAATCAGCTCCTCGTGGGTAGCCTGTTTCGCGATCAGTCCCT
TCCATGGGAAGGCCTCGCAAGAGAGCATCTCATGAAGGCCTGGGAATCAG
TGCGGTATTTTGCGTTACTTGTTATGCAACACACAACCGATGATCATACC
TTCTCCTTGCTGGCTGGATCCATTATTGAGCCTGCGCTGGACAGATTGAG
GCAAAATTTGCTGGACAAGCTCGATGAGCTGACGGCATACACGAAACGGG
GCCACCCATTGCCCGTGGGCAAGAGCTTCCTCACGCAGATACAGAAGGCG
CGAAGCGAACGTCAGGTGTCTTCGTTGAAGACAAAACTCAAGTCCACCCA
TTTTCACAAGCCTGACGGGGAAGCCCTATTCTCGATGAAAGCAATCGAAG
AGGCAACTTCCAGCTTGGAACTGTCCCGTGATGAATATGCGGCGGCCGAA
ATCATCGACCAAATGCAAGCGTATTACGATACTGCCATCGTGACCTTCGT
CGACAACGTTGCAACCCTGGGCATTGAAAACTGTCTTCTTGACCCTTTGC
AGCGGATCCTGACTAGCCAGGTGATTAACAATATGGATGATGATCAGGTG
CGAGAATTAGCCTCTGAGCCCTCCTTCATCAGCGACGAGAGAGGCCGTCT
GGCCAGTGAGGTCGAAAAACTGCAGGCTGGTCTCCGCACTCTCAAGACAT
TCAACATCCAAAAGCCTTCAATGAGTGGGCCGCCCTCAATTGAAAAGCTG
GAGAAACCATCAACCAGCATTCTGGACAATCCTATGCCACTCACAGGGTT
AAAATCGACGGCCCAGCCGTCCTTCTTTTCAAGTCTGCCTGAAGCGAAGA
CTTATAAATCACCGGCTACGAAGCCTTTTGACGGAGCTGTAACCCCGGGC
CTCTTTAATTTTACAAGTAGGACATTATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
| GO:0003924 | GTPase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002923-T2.utr5p1 | KJC3_002923-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_002923-T2.utr3p1 | KJC3_002923-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.19 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR030381 |
| DBxref | InterPro:IPR020850 |
| DBxref | InterPro:IPR000375 |
| DBxref | InterPro:IPR001401 |
| DBxref | InterPro:IPR022812 |
| DBxref | PFAM:PF00350 |
| DBxref | PFAM:PF01031 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch2 | supercontig | ch2:3956889..3961060 + |
|
