You are here

Home

KJC3_002934-T1, KJC3_002934-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002934-T1
Unique NameKJC3_002934-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch2:3982478..3983356-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002934-T1 ID=KJC3_002934-T1|Name=KJC3_002934-T1|organism=Aspergillus niger KJC3|type=mRNA|length=879bp|location=Sequence derived from alignment at ch2:3982478..3983356- (Aspergillus niger KJC3)
ATGCCTCCGAGTATGCATGACACCCCGGCCACTAGCGGCAACGGCAACGG
CAATGCGACAGCAGCCAACACGTCACCAGCCTTTCTCGACACCACCCCAG
GCCCAGACCACGACTGGAAAGTGTCCTTGAAGGGCAAAGTGATTGGCATC
ACCGGAGGCAACAGGGGTATCGGGCTGGCTCTCGCCCAAGTGTGTCTCGC
CAACGACGCAGAAGCTATCTACAGCTTAGACATCTTCGAGCCCGGCGAGG
AATTCGCTACCCTACAAAAAGCCCATCCCAAGCGACTATACTACGTCCAC
TGTGATGTGACATCCGAGGAAAGCGTGAATTCTGCCATCGACGCTGTCAT
CGCTGCACAAGGTGCGATCCACGGCTTCATCGCCAATGCCGGTATGACGA
AGCACCAGCCTGCTTTCGACTTCAGTCGCGCCCAGATCGAACAATTGTTC
AACTTGAACGTCTTTGGCGCTTACTTCTGCGCTACTACTGTTGCTCGTCG
TTTCATCGATCTCGGAATCAAGGGGTCTATTGTCTTCACGGCTTCGATGA
CTTCGTATCGTCCCAACCGGGCGGCTCCTTCCGCTCCCTATGGAGCCACC
AAGGGTGCCGTGCGGAATATGACACACACGCTGGCCATGGAGTGGGCCAA
GCATGGCATTCGCGTCAACTCGGTATCACCAGGGTTCATTAAGACGGCCA
TGACTTATTTCGTTGATCAAGCGCCGGACTGGGATCTCAAGATGCAGTAT
TATGGCGGTATGCCCAGATTGGCGGATCCCAAAGAGCTGGGCGGAGCTTA
TGTGTATTTACTGTCTGACGGTGCGTCGTATACGACGGGCGTCGATATTC
CCGTGGCAGGAATTGTGGGAGCGTGGTAG
back to top

Coding sequence (CDS) from alignment at ch2:3982478..3983356-

>KJC3_002934-T1 ID=KJC3_002934-T1|Name=KJC3_002934-T1|organism=Aspergillus niger KJC3|type=CDS|length=879bp|location=Sequence derived from alignment at ch2:3982478..3983356- (Aspergillus niger KJC3)
ATGCCTCCGAGTATGCATGACACCCCGGCCACTAGCGGCAACGGCAACGG
CAATGCGACAGCAGCCAACACGTCACCAGCCTTTCTCGACACCACCCCAG
GCCCAGACCACGACTGGAAAGTGTCCTTGAAGGGCAAAGTGATTGGCATC
ACCGGAGGCAACAGGGGTATCGGGCTGGCTCTCGCCCAAGTGTGTCTCGC
CAACGACGCAGAAGCTATCTACAGCTTAGACATCTTCGAGCCCGGCGAGG
AATTCGCTACCCTACAAAAAGCCCATCCCAAGCGACTATACTACGTCCAC
TGTGATGTGACATCCGAGGAAAGCGTGAATTCTGCCATCGACGCTGTCAT
CGCTGCACAAGGTGCGATCCACGGCTTCATCGCCAATGCCGGTATGACGA
AGCACCAGCCTGCTTTCGACTTCAGTCGCGCCCAGATCGAACAATTGTTC
AACTTGAACGTCTTTGGCGCTTACTTCTGCGCTACTACTGTTGCTCGTCG
TTTCATCGATCTCGGAATCAAGGGGTCTATTGTCTTCACGGCTTCGATGA
CTTCGTATCGTCCCAACCGGGCGGCTCCTTCCGCTCCCTATGGAGCCACC
AAGGGTGCCGTGCGGAATATGACACACACGCTGGCCATGGAGTGGGCCAA
GCATGGCATTCGCGTCAACTCGGTATCACCAGGGTTCATTAAGACGGCCA
TGACTTATTTCGTTGATCAAGCGCCGGACTGGGATCTCAAGATGCAGTAT
TATGGCGGTATGCCCAGATTGGCGGATCCCAAAGAGCTGGGCGGAGCTTA
TGTGTATTTACTGTCTGACGGTGCGTCGTATACGACGGGCGTCGATATTC
CCGTGGCAGGAATTGTGGGAGCGTGGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002934KJC3_002934Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002934-T1.cdsKJC3_002934-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002934-T1.exon1KJC3_002934-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002934-T1KJC3_002934-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002347
DBxrefPFAM:PF08659
DBxrefPFAM:PF13561
DBxrefPFAM:PF00106
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch2supercontigch2:3982478..3983356 -
Powered by Drupal