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KJC3_002959-T1, KJC3_002959-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_002959-T1
Unique NameKJC3_002959-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch3:57805..59257-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_002959-T1 ID=KJC3_002959-T1|Name=KJC3_002959-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1453bp|location=Sequence derived from alignment at ch3:57805..59257- (Aspergillus niger KJC3)
CCCATATCGTTGGTAAAGGTGTAGTTAATCATCTGCATGCTCTACTCTAA
CGCTAGAAAGTGCGAATGATGACGCCGATCGATACTGTCTTTGGATAGCA
TAGTGAGACACACACGCCCGAGTGATGGACTTGCCCCACTAATCCAGGCA
GATTCAGATCGTCCGGATCATCGTCCCTTTTTCTTCTGCAGTGTGTTCAT
ATTCCCCTCCAACTAGCAAACAGAATACTCACCACAAGTCAAGATGCCGG
TTACTTTGACTACTTCCAGCTCCAAACCAGAGGCGTGGGGTGGAGCCAAG
GCAGACACGGCGGAATCCCTCTTGGAGGAGTCCTGCCCAGAAAATGCCCG
TCGCTGCAAACAGCTGTTCCAGAGCTCTTTCACCCCGCAACGACTCGCAG
ACAACCACATCAGCTCCTCTTCCAATGGACTTGTCCATGCCGTGTACCGG
GCATATAGCCACCACCACCATCTGACCCTGCGACCAGAGGACGTGTGGTT
CGCCATCCTCTCCCAACTGAGCTTCTACATCAACGAACATGCCGAAGATT
TGCGGTCGCATTTCGTGGCCCATGAAGGCAAGGAGGAACTTTCTGTCAGG
GCAGTCGGGACAATTCATTCAGTCGACTTGGGTGCATTGGCAGTTCAAAT
GACCGAGGAAATTCAAAAAAAGGTCGTGGATCCCGAACTACGGACGTGGC
TCATGCCGGCATTCAGCACCACCACCGTCAGTGACCAGATTGTAGCAGCT
GTCCTGATGATGGGTGCCATGCAGCAATACTTCTCCTATGCGGCCTATCT
CATGTGTGGTATCCCCAGTGTGACGTTGGAGGGAGAGCGGGAAGACTGGG
TACAACTGCTGAGCAAACTGGACAAGCTCCCCGACTTGGGTGCGGAGCCC
GCTCAATTTGCTCGCCTTCTCCGACCTATCCTGCACAGATTTGTTATCTC
CTTTGACGAGCCCACTGCAGAGTCGATTCGGGAATTCTGGGGCTTATGCG
CAGATCGAATCTCTGGCGGAAGCGGCCCCTCCTACCTCTCGGGATGGATT
ACCGCGTTCTGCTACTGGAATGAAAAAGGTCAGCCCATGGACAAGGGAAC
GCCGGGATGTGAACTGGATGGTGTCCAGTTTCATCGTGTCGACTTCACGG
ACATCCCCGGCGCGTTCGCCTCAGTCCCTATGAAGGTTAATGACAATGGC
ACGGAATATGAAACGGAACTAGTCGCTGGAGTAGTAGGCATTCATGCAAG
CTGTGGTAGACAGACGATGGCTGCTGTTGGAGATACAGATGCCCAGCACG
ACATGATCCAGCCGGCTTCGGGGTGGTGGATATATGAGAAGGAAGCTGCT
GCGGAGAATCCAGAATGAATCCACCAGGGCGTGGACTTGGTAATTGCTTA
GTATACACCAAAGCTCAAAATAGTTCATTCGAGGATGCAATACCCATTTC
ATA
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Coding sequence (CDS) from alignment at ch3:57805..59257-

>KJC3_002959-T1 ID=KJC3_002959-T1|Name=KJC3_002959-T1|organism=Aspergillus niger KJC3|type=CDS|length=1125bp|location=Sequence derived from alignment at ch3:57805..59257- (Aspergillus niger KJC3)
ATGCCGGTTACTTTGACTACTTCCAGCTCCAAACCAGAGGCGTGGGGTGG
AGCCAAGGCAGACACGGCGGAATCCCTCTTGGAGGAGTCCTGCCCAGAAA
ATGCCCGTCGCTGCAAACAGCTGTTCCAGAGCTCTTTCACCCCGCAACGA
CTCGCAGACAACCACATCAGCTCCTCTTCCAATGGACTTGTCCATGCCGT
GTACCGGGCATATAGCCACCACCACCATCTGACCCTGCGACCAGAGGACG
TGTGGTTCGCCATCCTCTCCCAACTGAGCTTCTACATCAACGAACATGCC
GAAGATTTGCGGTCGCATTTCGTGGCCCATGAAGGCAAGGAGGAACTTTC
TGTCAGGGCAGTCGGGACAATTCATTCAGTCGACTTGGGTGCATTGGCAG
TTCAAATGACCGAGGAAATTCAAAAAAAGGTCGTGGATCCCGAACTACGG
ACGTGGCTCATGCCGGCATTCAGCACCACCACCGTCAGTGACCAGATTGT
AGCAGCTGTCCTGATGATGGGTGCCATGCAGCAATACTTCTCCTATGCGG
CCTATCTCATGTGTGGTATCCCCAGTGTGACGTTGGAGGGAGAGCGGGAA
GACTGGGTACAACTGCTGAGCAAACTGGACAAGCTCCCCGACTTGGGTGC
GGAGCCCGCTCAATTTGCTCGCCTTCTCCGACCTATCCTGCACAGATTTG
TTATCTCCTTTGACGAGCCCACTGCAGAGTCGATTCGGGAATTCTGGGGC
TTATGCGCAGATCGAATCTCTGGCGGAAGCGGCCCCTCCTACCTCTCGGG
ATGGATTACCGCGTTCTGCTACTGGAATGAAAAAGGTCAGCCCATGGACA
AGGGAACGCCGGGATGTGAACTGGATGGTGTCCAGTTTCATCGTGTCGAC
TTCACGGACATCCCCGGCGCGTTCGCCTCAGTCCCTATGAAGGTTAATGA
CAATGGCACGGAATATGAAACGGAACTAGTCGCTGGAGTAGTAGGCATTC
ATGCAAGCTGTGGTAGACAGACGATGGCTGCTGTTGGAGATACAGATGCC
CAGCACGACATGATCCAGCCGGCTTCGGGGTGGTGGATATATGAGAAGGA
AGCTGCTGCGGAGAATCCAGAATGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_002959KJC3_002959Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002959-T1KJC3_002959-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002959-T1.cdsKJC3_002959-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002959-T1.utr3p1KJC3_002959-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002959-T1.exon3KJC3_002959-T1.exon3Aspergillus niger KJC3exon
KJC3_002959-T1.exon2KJC3_002959-T1.exon2Aspergillus niger KJC3exon
KJC3_002959-T1.exon1KJC3_002959-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_002959-T1.utr5p3KJC3_002959-T1.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_002959-T1.utr5p2KJC3_002959-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_002959-T1.utr5p1KJC3_002959-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR025533
DBxrefPFAM:PF14388
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch3supercontigch3:57805..59257 -
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